RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 ALKBH7Q9BT30 221 aaPredicted RBP3.61□□□□□ -1.83
SSX4B-201ENST00000595235 VCX2Q9H322 139 aa3.61□□□□□ -1.83
SSX4B-201ENST00000595235 CARHSP1Q9Y2V2 147 aaKnown RBP3.61□□□□□ -1.83
SSX4B-201ENST00000595235 LINC01546A6NGU7 62 aa3.6□□□□□ -1.83
SSX4B-201ENST00000595235 S100PP25815 95 aa3.6□□□□□ -1.83
SSX4B-201ENST00000595235 SRSF9Q13242 221 aaKnown RBP eCLIP3.6□□□□□ -1.83
SSX4B-201ENST00000595235 GAGE2EQ4V326 116 aa3.6□□□□□ -1.83
SSX4B-201ENST00000595235 SPINK6Q6UWN8 80 aa3.6□□□□□ -1.83
SSX4B-201ENST00000595235 FAM19A5Q7Z5A7 132 aaPredicted RBP3.6□□□□□ -1.83
SSX4B-201ENST00000595235 LINC01561Q8N1V8 128 aa3.6□□□□□ -1.83
SSX4B-201ENST00000595235 LINC01600Q96MT4 127 aa3.6□□□□□ -1.83
SSX4B-201ENST00000595235 TIMM17AQ99595 171 aa3.6□□□□□ -1.83
SSX4B-201ENST00000595235 GNB1LQ9BYB4 327 aa3.6□□□□□ -1.83
SSX4B-201ENST00000595235 GAGE2DQ9UEU5 116 aa3.6□□□□□ -1.83
SSX4B-201ENST00000595235 PSORS1C2Q9UIG4 136 aa3.6□□□□□ -1.83
SSX4B-201ENST00000595235 PLA2G2DQ9UNK4 145 aa3.6□□□□□ -1.83
SSX4B-201ENST00000595235 TRBV30A0A0K0K1B3 111 aa3.59□□□□□ -1.83
SSX4B-201ENST00000595235 RHEBQ15382 184 aa3.59□□□□□ -1.83
SSX4B-201ENST00000595235 C9orf129Q5T035 196 aaKnown RBP3.59□□□□□ -1.83
SSX4B-201ENST00000595235 SCGB3A1Q96QR1 104 aa3.59□□□□□ -1.83
SSX4B-201ENST00000595235 RPS10P5Q9NQ39 176 aa3.59□□□□□ -1.83
SSX4B-201ENST00000595235 TOMM7Q9P0U1 55 aa3.59□□□□□ -1.83
SSX4B-201ENST00000595235 CDKN2A-AS1Q9UH64 79 aa3.59□□□□□ -1.83
SSX4B-201ENST00000595235 SMIM1B2RUZ4 78 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 NDUFC2-KCTD14E9PQ53 114 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 M0QXV9 152 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 MT-ND6P03923 174 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 PRSS2P07478 247 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 G0S2P27469 103 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 HERVK_113P63121 156 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 SEC11AP67812 179 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 FABP9Q0Z7S8 132 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 COX19Q49B96 90 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 ANKRD39Q53RE8 183 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 C1orf137Q5JT78 98 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 PAPPA-AS1Q5QFB9 102 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 ERASQ7Z444 233 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 Q8IZM0 81 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 LINC00469Q8N7U9 141 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 URB1-AS1Q96HZ7 61 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 PACRGQ96M98 296 aaPredicted RBP3.58□□□□□ -1.84
SSX4B-201ENST00000595235 GEMIN7Q9H840 131 aaKnown RBP3.58□□□□□ -1.84
SSX4B-201ENST00000595235 TNXBP22105 4242 aa3.58□□□□□ -1.84
SSX4B-201ENST00000595235 IGLV5-45A0A087WSX0 123 aa3.57□□□□□ -1.84
SSX4B-201ENST00000595235 A0A096LNJ9 63 aa3.57□□□□□ -1.84
SSX4B-201ENST00000595235 IGLV7-43P04211 117 aa3.57□□□□□ -1.84
SSX4B-201ENST00000595235 KRTAP10-8P60410 259 aa3.57□□□□□ -1.84
SSX4B-201ENST00000595235 CKS1BP61024 79 aa3.57□□□□□ -1.84
SSX4B-201ENST00000595235 C6orf226Q5I0X4 101 aa3.57□□□□□ -1.84
SSX4B-201ENST00000595235 REG3GQ6UW15 175 aa3.57□□□□□ -1.84
SSX4B-201ENST00000595235 FA2HQ7L5A8 372 aa3.57□□□□□ -1.84
SSX4B-201ENST00000595235 TINCRA0A1B0GVN0 87 aa3.56□□□□□ -1.84
SSX4B-201ENST00000595235 F8VRH5 84 aa3.56□□□□□ -1.84
SSX4B-201ENST00000595235 APOC3P02656 99 aa3.56□□□□□ -1.84
SSX4B-201ENST00000595235 SPINK8P0C7L1 97 aa3.56□□□□□ -1.84
SSX4B-201ENST00000595235 PMCHL1Q16048 86 aa3.56□□□□□ -1.84
SSX4B-201ENST00000595235 C18orf32Q8TCD1 76 aa3.56□□□□□ -1.84
SSX4B-201ENST00000595235 CST9LQ9H4G1 147 aa3.56□□□□□ -1.84
SSX4B-201ENST00000595235 XAGE1AQ9HD64 81 aa3.56□□□□□ -1.84
SSX4B-201ENST00000595235 SMCO4Q9NRQ5 59 aa3.56□□□□□ -1.84
SSX4B-201ENST00000595235 TRAPPC1Q9Y5R8 145 aa3.56□□□□□ -1.84
SSX4B-201ENST00000595235 LINC01549A6NIU2 74 aa3.55□□□□□ -1.84
SSX4B-201ENST00000595235 CXCL5P42830 114 aa3.55□□□□□ -1.84
SSX4B-201ENST00000595235 UBE2BP63146 152 aa3.55□□□□□ -1.84
SSX4B-201ENST00000595235 PMVKQ15126 192 aa3.55□□□□□ -1.84
SSX4B-201ENST00000595235 PDZD11Q5EBL8 140 aa3.55□□□□□ -1.84
SSX4B-201ENST00000595235 COX7B2Q8TF08 81 aa3.55□□□□□ -1.84
SSX4B-201ENST00000595235 YPEL4Q96NS1 127 aa3.55□□□□□ -1.84
SSX4B-201ENST00000595235 KRTAP4-7Q9BYR0 210 aa3.55□□□□□ -1.84
SSX4B-201ENST00000595235 UBR4Q5T4S7 5183 aa3.54□□□□□ -1.84
SSX4B-201ENST00000595235 H0Y9J4 135 aa3.54□□□□□ -1.84
SSX4B-201ENST00000595235 SNAPINO95295 136 aa3.54□□□□□ -1.84
SSX4B-201ENST00000595235 HBDP02042 147 aa3.54□□□□□ -1.84
SSX4B-201ENST00000595235 LINC00614P0C842 121 aa3.54□□□□□ -1.84
SSX4B-201ENST00000595235 IGLC3P0DOY3 106 aa3.54□□□□□ -1.84
SSX4B-201ENST00000595235 ZNF22P17026 224 aaPredicted RBP3.54□□□□□ -1.84
SSX4B-201ENST00000595235 SVBPQ8N300 66 aa3.54□□□□□ -1.84
SSX4B-201ENST00000595235 C22orf24Q9Y442 160 aa3.54□□□□□ -1.84
SSX4B-201ENST00000595235 KRTAP1-4P0C5Y4 121 aa3.53□□□□□ -1.84
SSX4B-201ENST00000595235 NDUFA6P56556 154 aa3.53□□□□□ -1.84
SSX4B-201ENST00000595235 NDUFA5Q16718 116 aa3.53□□□□□ -1.84
SSX4B-201ENST00000595235 PRR26Q8N8Z3 221 aa3.53□□□□□ -1.84
SSX4B-201ENST00000595235 DIRC1Q969H9 104 aa3.53□□□□□ -1.84
SSX4B-201ENST00000595235 IGLV5-39A0A0G2JS06 123 aa3.52□□□□□ -1.85
SSX4B-201ENST00000595235 C11orf86A6NJI1 115 aa3.52□□□□□ -1.85
SSX4B-201ENST00000595235 H3BRM9 83 aa3.52□□□□□ -1.85
SSX4B-201ENST00000595235 RAB5BP61020 215 aa3.52□□□□□ -1.85
SSX4B-201ENST00000595235 MRPL55Q7Z7F7 128 aaKnown RBP3.52□□□□□ -1.85
SSX4B-201ENST00000595235 CBLN2Q8IUK8 224 aa3.52□□□□□ -1.85
SSX4B-201ENST00000595235 TP73-AS1Q9UF72 201 aa3.52□□□□□ -1.85
SSX4B-201ENST00000595235 GAGE10A6NGK3 116 aa3.51□□□□□ -1.85
SSX4B-201ENST00000595235 RPL37AP8A6NKH3 93 aa3.51□□□□□ -1.85
SSX4B-201ENST00000595235 NUPR1O60356 82 aa3.51□□□□□ -1.85
SSX4B-201ENST00000595235 ZNF861PO60384 105 aa3.51□□□□□ -1.85
SSX4B-201ENST00000595235 SCO1O75880 301 aa3.51□□□□□ -1.85
SSX4B-201ENST00000595235 ATP5LO75964 103 aa3.51□□□□□ -1.85
SSX4B-201ENST00000595235 PFN2P35080 140 aa3.51□□□□□ -1.85
SSX4B-201ENST00000595235 LBHQ53QV2 105 aaPredicted RBP3.51□□□□□ -1.85
SSX4B-201ENST00000595235 BAGE3Q86Y29 109 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms