RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 C22orf24Q9Y442 160 aa12.08□□□□□ -0.48
SHKBP1-205ENST00000594973 LINC00308Q8TCZ7 52 aa12.07□□□□□ -0.48
SHKBP1-205ENST00000594973 RPL36AP83881 106 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-205ENST00000594973 RPL36ALQ969Q0 106 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-205ENST00000594973 UPK3BQ9BT76 320 aa12.06□□□□□ -0.48
SHKBP1-205ENST00000594973 TRBV10-1A0A0K0K1A3 114 aa12.04□□□□□ -0.48
SHKBP1-205ENST00000594973 A8MZ25 164 aa12.04□□□□□ -0.48
SHKBP1-205ENST00000594973 Q6JHZ5 121 aa12.04□□□□□ -0.48
SHKBP1-205ENST00000594973 OVOL2Q9BRP0 275 aa12.04□□□□□ -0.48
SHKBP1-205ENST00000594973 LOC100131303A0A0U1RQF7 123 aa12.03□□□□□ -0.48
SHKBP1-205ENST00000594973 CYSTM1Q9H1C7 97 aa12.03□□□□□ -0.48
SHKBP1-205ENST00000594973 TRGV4A0A0C4DH28 118 aa12.03□□□□□ -0.48
SHKBP1-205ENST00000594973 DEFB130BP0DP73 79 aa12.03□□□□□ -0.48
SHKBP1-205ENST00000594973 DEFB130AP0DP74 79 aa12.03□□□□□ -0.48
SHKBP1-205ENST00000594973 IGLV5-45A0A087WSX0 123 aa12.02□□□□□ -0.49
SHKBP1-205ENST00000594973 DGAT2L7PQ6IED9 249 aa12.02□□□□□ -0.49
SHKBP1-205ENST00000594973 NTM-AS1Q6ZSK4 140 aa12.02□□□□□ -0.49
SHKBP1-205ENST00000594973 KIR2DL5BQ8NHK3 375 aa12.02□□□□□ -0.49
SHKBP1-205ENST00000594973 MALP21145 153 aa12.01□□□□□ -0.49
SHKBP1-205ENST00000594973 PRIMA1Q86XR5 153 aa12□□□□□ -0.49
SHKBP1-205ENST00000594973 MRAPQ8TCY5 172 aa12□□□□□ -0.49
SHKBP1-205ENST00000594973 F5H768 121 aa11.99□□□□□ -0.49
SHKBP1-205ENST00000594973 TRAV13-1A0A0B4J241 112 aa11.99□□□□□ -0.49
SHKBP1-205ENST00000594973 DNAL4O96015 105 aa11.98□□□□□ -0.49
SHKBP1-205ENST00000594973 OXTP01178 125 aa11.98□□□□□ -0.49
SHKBP1-205ENST00000594973 Q5XG85 94 aa11.98□□□□□ -0.49
SHKBP1-205ENST00000594973 X6R8D5 127 aa11.98□□□□□ -0.49
SHKBP1-205ENST00000594973 TRBV6-4A0A1B0GX49 114 aa11.98□□□□□ -0.49
SHKBP1-205ENST00000594973 FHL2Q14192 279 aa11.98□□□□□ -0.49
SHKBP1-205ENST00000594973 IGLV5-39A0A0G2JS06 123 aa11.97□□□□□ -0.49
SHKBP1-205ENST00000594973 NDUFC2-KCTD14E9PQ53 114 aa11.97□□□□□ -0.49
SHKBP1-205ENST00000594973 DEFB135Q30KP9 77 aa11.97□□□□□ -0.49
SHKBP1-205ENST00000594973 FAM218AQ96MZ4 157 aa11.97□□□□□ -0.49
SHKBP1-205ENST00000594973 CDKN2A-AS1Q9UH64 79 aa11.97□□□□□ -0.49
SHKBP1-205ENST00000594973 Q9H8V8 135 aa11.97□□□□□ -0.49
SHKBP1-205ENST00000594973 BAHCC1Q9P281 2608 aa11.96□□□□□ -0.49
SHKBP1-205ENST00000594973 C4orf26Q17RF5 130 aa11.96□□□□□ -0.49
SHKBP1-205ENST00000594973 SOSTDC1Q6X4U4 206 aa11.96□□□□□ -0.49
SHKBP1-205ENST00000594973 DSCR8Q96T75 97 aa11.96□□□□□ -0.49
SHKBP1-205ENST00000594973 FBN1P35555 2871 aaKnown RBP11.96□□□□□ -0.5
SHKBP1-205ENST00000594973 DEFB4AO15263 64 aa11.95□□□□□ -0.5
SHKBP1-205ENST00000594973 RPL28P46779 137 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-205ENST00000594973 OBSCN-AS1Q96MR7 158 aa11.95□□□□□ -0.5
SHKBP1-205ENST00000594973 STAB1Q9NY15 2570 aa11.94□□□□□ -0.5
SHKBP1-205ENST00000594973 USP17L23D6RBM5 183 aa11.94□□□□□ -0.5
SHKBP1-205ENST00000594973 UBE2L6O14933 153 aa11.94□□□□□ -0.5
SHKBP1-205ENST00000594973 PKD1L1Q8TDX9 2849 aa11.93□□□□□ -0.5
SHKBP1-205ENST00000594973 TRAV13-2A0A0B4J235 113 aa11.93□□□□□ -0.5
SHKBP1-205ENST00000594973 LINC01561Q8N1V8 128 aa11.93□□□□□ -0.5
SHKBP1-205ENST00000594973 TMEM243Q9BU79 118 aa11.93□□□□□ -0.5
SHKBP1-205ENST00000594973 IGKV3D-7A0A0C4DH55 119 aa11.92□□□□□ -0.5
SHKBP1-205ENST00000594973 NDUFC2O95298 119 aa11.92□□□□□ -0.5
SHKBP1-205ENST00000594973 HRCT1Q6UXD1 115 aa11.92□□□□□ -0.5
SHKBP1-205ENST00000594973 WFDC9Q8NEX5 89 aa11.92□□□□□ -0.5
SHKBP1-205ENST00000594973 APOC4P55056 127 aa11.92□□□□□ -0.5
SHKBP1-205ENST00000594973 COX6A2Q02221 97 aa11.92□□□□□ -0.5
SHKBP1-205ENST00000594973 MAST4O15021 2626 aa11.91□□□□□ -0.5
SHKBP1-205ENST00000594973 Q9HAA7 133 aa11.91□□□□□ -0.5
SHKBP1-205ENST00000594973 LINC00846Q9NV44 126 aa11.91□□□□□ -0.5
SHKBP1-205ENST00000594973 FAM19A3Q7Z5A8 133 aa11.9□□□□□ -0.5
SHKBP1-205ENST00000594973 CDC42SE2Q9NRR3 84 aa11.9□□□□□ -0.5
SHKBP1-205ENST00000594973 LINC00242Q5T6M2 205 aa11.89□□□□□ -0.51
SHKBP1-205ENST00000594973 LINC00612Q8N6U2 182 aa11.89□□□□□ -0.51
SHKBP1-205ENST00000594973 ZNF625Q96I27 306 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-205ENST00000594973 C14orf132Q9NPU4 83 aa11.88□□□□□ -0.51
SHKBP1-205ENST00000594973 IGHV4-30-4P0DP06 118 aa11.88□□□□□ -0.51
SHKBP1-205ENST00000594973 GYPEP15421 78 aa11.88□□□□□ -0.51
SHKBP1-205ENST00000594973 KRTAP24-1Q3LI83 254 aa11.88□□□□□ -0.51
SHKBP1-205ENST00000594973 A0A087WVE0 104 aa11.87□□□□□ -0.51
SHKBP1-205ENST00000594973 TRBV6-8A0A0A6YYG3 113 aa11.87□□□□□ -0.51
SHKBP1-205ENST00000594973 IGHV4-28A0A0C4DH34 117 aa11.87□□□□□ -0.51
SHKBP1-205ENST00000594973 A0A0U1RRA0 63 aa11.87□□□□□ -0.51
SHKBP1-205ENST00000594973 OXLD1Q5BKU9 147 aa11.87□□□□□ -0.51
SHKBP1-205ENST00000594973 ANK2Q01484 3957 aa11.87□□□□□ -0.51
SHKBP1-205ENST00000594973 H0YGX0 51 aa11.87□□□□□ -0.51
SHKBP1-205ENST00000594973 A0A096LPF7 62 aa11.86□□□□□ -0.51
SHKBP1-205ENST00000594973 IGKV3OR2-268A0A0C4DH90 116 aa11.86□□□□□ -0.51
SHKBP1-205ENST00000594973 SMIM1B2RUZ4 78 aa11.86□□□□□ -0.51
SHKBP1-205ENST00000594973 CRPP02741 224 aa11.86□□□□□ -0.51
SHKBP1-205ENST00000594973 S100A7L2Q5SY68 101 aa11.86□□□□□ -0.51
SHKBP1-205ENST00000594973 LYRM9A8MSI8 78 aa11.85□□□□□ -0.51
SHKBP1-205ENST00000594973 ATP5EP2Q5VTU8 51 aa11.85□□□□□ -0.51
SHKBP1-205ENST00000594973 PRO0255Q9UI72 69 aa11.84□□□□□ -0.51
SHKBP1-205ENST00000594973 IGLV4-60A0A075B6I1 120 aa11.83□□□□□ -0.51
SHKBP1-205ENST00000594973 EPM2AB3EWF7 344 aa11.83□□□□□ -0.51
SHKBP1-205ENST00000594973 C9orf129Q5T035 196 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-205ENST00000594973 CELA1Q9UNI1 258 aa11.82□□□□□ -0.52
SHKBP1-205ENST00000594973 A0A087WYN8 130 aa11.82□□□□□ -0.52
SHKBP1-205ENST00000594973 PAX4O43316 350 aa11.82□□□□□ -0.52
SHKBP1-205ENST00000594973 DAD1P61803 113 aa11.82□□□□□ -0.52
SHKBP1-205ENST00000594973 Q8NAQ8 132 aa11.82□□□□□ -0.52
SHKBP1-205ENST00000594973 PRO0628Q9UI54 55 aa11.82□□□□□ -0.52
SHKBP1-205ENST00000594973 CMYA5Q8N3K9 4069 aa11.82□□□□□ -0.52
SHKBP1-205ENST00000594973 COL6A5A8TX70 2615 aa11.8□□□□□ -0.52
SHKBP1-205ENST00000594973 MIFP14174 115 aa11.8□□□□□ -0.52
SHKBP1-205ENST00000594973 LINC00337Q8N6G1 96 aa11.8□□□□□ -0.52
SHKBP1-205ENST00000594973 CYSRT1A8MQ03 144 aa11.8□□□□□ -0.52
SHKBP1-205ENST00000594973 GHRHP01286 108 aa11.8□□□□□ -0.52
SHKBP1-205ENST00000594973 CCKP06307 115 aa11.8□□□□□ -0.52
SHKBP1-205ENST00000594973 PFN2P35080 140 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms