RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 AKAP9Q99996 3911 aa9.14□□□□□ -0.95
VRK3-209ENST00000594948 IGHV4-28A0A0C4DH34 117 aa9.14□□□□□ -0.95
VRK3-209ENST00000594948 SERP2Q8N6R1 65 aa9.14□□□□□ -0.95
VRK3-209ENST00000594948 MUC7Q8TAX7 377 aa9.14□□□□□ -0.95
VRK3-209ENST00000594948 PRO0255Q9UI72 69 aa9.14□□□□□ -0.95
VRK3-209ENST00000594948 TEX15Q9BXT5 2789 aa9.14□□□□□ -0.95
VRK3-209ENST00000594948 IGKV3D-7A0A0C4DH55 119 aa9.13□□□□□ -0.95
VRK3-209ENST00000594948 SLPIP03973 132 aa9.13□□□□□ -0.95
VRK3-209ENST00000594948 KIAA0087Q14695 138 aa9.13□□□□□ -0.95
VRK3-209ENST00000594948 CD164L2Q6UWJ8 174 aa9.13□□□□□ -0.95
VRK3-209ENST00000594948 CHD6Q8TD26 2715 aa9.13□□□□□ -0.95
VRK3-209ENST00000594948 PRB1P04280 392 aa9.12□□□□□ -0.95
VRK3-209ENST00000594948 NOTCH3Q9UM47 2321 aa9.12□□□□□ -0.95
VRK3-209ENST00000594948 DEFB130BP0DP73 79 aa9.12□□□□□ -0.95
VRK3-209ENST00000594948 DEFB130AP0DP74 79 aa9.12□□□□□ -0.95
VRK3-209ENST00000594948 RPS28P62857 69 aaKnown RBP9.12□□□□□ -0.95
VRK3-209ENST00000594948 CFAP161Q6P656 301 aa9.12□□□□□ -0.95
VRK3-209ENST00000594948 C11orf68Q9H3H3 251 aaKnown RBP9.12□□□□□ -0.95
VRK3-209ENST00000594948 LYPD5Q6UWN5 251 aa9.11□□□□□ -0.95
VRK3-209ENST00000594948 ACACBO00763 2458 aa9.11□□□□□ -0.95
VRK3-209ENST00000594948 POLQO75417 2590 aa9.11□□□□□ -0.95
VRK3-209ENST00000594948 ZNF843Q8N446 348 aa9.1□□□□□ -0.95
VRK3-209ENST00000594948 MYO18BQ8IUG5 2567 aa9.1□□□□□ -0.95
VRK3-209ENST00000594948 TRBV10-3A0A0K0K1G6 114 aa9.1□□□□□ -0.95
VRK3-209ENST00000594948 USP17L23D6RBM5 183 aa9.1□□□□□ -0.95
VRK3-209ENST00000594948 J3KT08 172 aa9.1□□□□□ -0.95
VRK3-209ENST00000594948 WFDC11Q8NEX6 87 aa9.1□□□□□ -0.95
VRK3-209ENST00000594948 UPK3BQ9BT76 320 aa9.1□□□□□ -0.95
VRK3-209ENST00000594948 X6R8D5 127 aa9.1□□□□□ -0.95
VRK3-209ENST00000594948 LYRM9A8MSI8 78 aa9.09□□□□□ -0.95
VRK3-209ENST00000594948 BBC3Q96PG8 261 aaPredicted RBP9.09□□□□□ -0.95
VRK3-209ENST00000594948 TMEM258P61165 79 aa9.08□□□□□ -0.96
VRK3-209ENST00000594948 KRTAP1-1Q07627 177 aa9.08□□□□□ -0.96
VRK3-209ENST00000594948 UBR5O95071 2799 aaPredicted RBP9.07□□□□□ -0.96
VRK3-209ENST00000594948 NAV2Q8IVL1 2488 aa9.07□□□□□ -0.96
VRK3-209ENST00000594948 hADV29S1A0JD25 119 aa9.07□□□□□ -0.96
VRK3-209ENST00000594948 H3BQ85 93 aa9.07□□□□□ -0.96
VRK3-209ENST00000594948 CHCHD10Q8WYQ3 142 aaPredicted RBP9.07□□□□□ -0.96
VRK3-209ENST00000594948 PTPN13Q12923 2485 aa9.07□□□□□ -0.96
VRK3-209ENST00000594948 SETXQ7Z333 2677 aaKnown RBP9.06□□□□□ -0.96
VRK3-209ENST00000594948 LINC00269Q8N2A0 174 aa9.06□□□□□ -0.96
VRK3-209ENST00000594948 FAM208BQ5VWN6 2430 aa9.06□□□□□ -0.96
VRK3-209ENST00000594948 A0A087WVE0 104 aa9.05□□□□□ -0.96
VRK3-209ENST00000594948 CLPSL2Q6UWE3 100 aa9.05□□□□□ -0.96
VRK3-209ENST00000594948 LINC00575Q6W349 94 aa9.05□□□□□ -0.96
VRK3-209ENST00000594948 C2CD3Q4AC94 2353 aa9.05□□□□□ -0.96
VRK3-209ENST00000594948 PRR3P79522 188 aaKnown RBP9.05□□□□□ -0.96
VRK3-209ENST00000594948 REG3AQ06141 175 aa9.05□□□□□ -0.96
VRK3-209ENST00000594948 LOC110117498A0A087WWA1 95 aa9.04□□□□□ -0.96
VRK3-209ENST00000594948 BCE1O60756 84 aa9.04□□□□□ -0.96
VRK3-209ENST00000594948 HILS1P60008 231 aa9.04□□□□□ -0.96
VRK3-209ENST00000594948 C6orf99Q4VX62 202 aa9.04□□□□□ -0.96
VRK3-209ENST00000594948 UBL5Q9BZL1 73 aa9.04□□□□□ -0.96
VRK3-209ENST00000594948 TLN2Q9Y4G6 2542 aa9.04□□□□□ -0.96
VRK3-209ENST00000594948 CSMD2Q7Z408 3487 aa9.04□□□□□ -0.96
VRK3-209ENST00000594948 ZNF561-AS1K7EIQ3 104 aa9.03□□□□□ -0.96
VRK3-209ENST00000594948 LINC00482Q8N8I6 264 aa9.03□□□□□ -0.96
VRK3-209ENST00000594948 USP24Q9UPU5 2620 aa9.03□□□□□ -0.96
VRK3-209ENST00000594948 LRRK2Q5S007 2527 aa9.03□□□□□ -0.96
VRK3-209ENST00000594948 C6orf223Q8N319 242 aa9.03□□□□□ -0.96
VRK3-209ENST00000594948 ITPR3Q14573 2671 aa9.02□□□□□ -0.97
VRK3-209ENST00000594948 A0A0J9YWU9 116 aa9.02□□□□□ -0.97
VRK3-209ENST00000594948 ANGP03950 147 aaKnown RBP9.02□□□□□ -0.97
VRK3-209ENST00000594948 IGHV4-30-4P0DP06 118 aa9.02□□□□□ -0.97
VRK3-209ENST00000594948 EPG5Q9HCE0 2579 aa9.01□□□□□ -0.97
VRK3-209ENST00000594948 NDUFC2-KCTD14E9PQ53 114 aa9.01□□□□□ -0.97
VRK3-209ENST00000594948 Q6ZQT0 140 aa9.01□□□□□ -0.97
VRK3-209ENST00000594948 A0A096LPF7 62 aa9.01□□□□□ -0.97
VRK3-209ENST00000594948 RBM3P98179 157 aaKnown RBP9.01□□□□□ -0.97
VRK3-209ENST00000594948 GVQW2A0A096LPI5 108 aaPredicted RBP9□□□□□ -0.97
VRK3-209ENST00000594948 IGLV6-57P01721 117 aa9□□□□□ -0.97
VRK3-209ENST00000594948 PDE6GP18545 87 aa9□□□□□ -0.97
VRK3-209ENST00000594948 Q8NDZ9 215 aa9□□□□□ -0.97
VRK3-209ENST00000594948 CYSTM1Q9H1C7 97 aa9□□□□□ -0.97
VRK3-209ENST00000594948 ZNF462Q96JM2 2506 aa9□□□□□ -0.97
VRK3-209ENST00000594948 SPAG11BQ08648 103 aa8.99□□□□□ -0.97
VRK3-209ENST00000594948 C9orf116Q5BN46 136 aaPredicted RBP8.99□□□□□ -0.97
VRK3-209ENST00000594948 JMJD1CQ15652 2540 aa8.99□□□□□ -0.97
VRK3-209ENST00000594948 ABCA12Q86UK0 2595 aa8.99□□□□□ -0.97
VRK3-209ENST00000594948 GHRHP01286 108 aa8.98□□□□□ -0.97
VRK3-209ENST00000594948 DPH3Q96FX2 82 aa8.98□□□□□ -0.97
VRK3-209ENST00000594948 IGLV10-54A0A075B6I4 117 aa8.98□□□□□ -0.97
VRK3-209ENST00000594948 LOC107984640A0A0U1RRK4 108 aa8.98□□□□□ -0.97
VRK3-209ENST00000594948 LELP1Q5T871 98 aa8.98□□□□□ -0.97
VRK3-209ENST00000594948 C9orf66Q5T8R8 295 aa8.98□□□□□ -0.97
VRK3-209ENST00000594948 ENHOQ6UWT2 76 aa8.97□□□□□ -0.97
VRK3-209ENST00000594948 PRR34Q9NV39 138 aa8.97□□□□□ -0.97
VRK3-209ENST00000594948 APOC4P55056 127 aa8.96□□□□□ -0.97
VRK3-209ENST00000594948 DAD1P61803 113 aa8.96□□□□□ -0.97
VRK3-209ENST00000594948 UNQ6190/PRO20217Q6UXQ8 127 aa8.96□□□□□ -0.97
VRK3-209ENST00000594948 FAM19A5Q7Z5A7 132 aaPredicted RBP8.96□□□□□ -0.97
VRK3-209ENST00000594948 CENPEQ02224 2701 aa8.96□□□□□ -0.97
VRK3-209ENST00000594948 KRTAP10-3P60369 221 aa8.96□□□□□ -0.98
VRK3-209ENST00000594948 FAM19A1Q7Z5A9 133 aa8.96□□□□□ -0.98
VRK3-209ENST00000594948 APCP25054 2843 aa8.95□□□□□ -0.98
VRK3-209ENST00000594948 C10orf25Q5T742 122 aa8.95□□□□□ -0.98
VRK3-209ENST00000594948 SONP18583 2426 aaKnown RBP8.95□□□□□ -0.98
VRK3-209ENST00000594948 TRAV23DV6A0A075B6W5 121 aa8.94□□□□□ -0.98
VRK3-209ENST00000594948 CYSRT1A8MQ03 144 aa8.94□□□□□ -0.98
VRK3-209ENST00000594948 MIFP14174 115 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms