RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 MZT2AQ6P582 158 aa1.27□□□□□ -2.21
VRK3-204ENST00000593912 SMIM4Q8WVI0 70 aa1.27□□□□□ -2.21
VRK3-204ENST00000593912 Q96NJ1 140 aa1.27□□□□□ -2.21
VRK3-204ENST00000593912 SPRR2GQ9BYE4 73 aa1.27□□□□□ -2.21
VRK3-204ENST00000593912 KCNIP2Q9NS61 270 aa1.27□□□□□ -2.21
VRK3-204ENST00000593912 ZFP30Q9Y2G7 519 aa1.27□□□□□ -2.21
VRK3-204ENST00000593912 CSDC2Q9Y534 153 aaKnown RBP1.27□□□□□ -2.21
VRK3-204ENST00000593912 A8MWL6 223 aa1.26□□□□□ -2.21
VRK3-204ENST00000593912 LTAP01374 205 aa1.26□□□□□ -2.21
VRK3-204ENST00000593912 STAG3L2P0CL84 134 aa1.26□□□□□ -2.21
VRK3-204ENST00000593912 STAG3L3P0CL85 134 aa1.26□□□□□ -2.21
VRK3-204ENST00000593912 RAB14P61106 215 aa1.26□□□□□ -2.21
VRK3-204ENST00000593912 UBE2G1P62253 170 aa1.26□□□□□ -2.21
VRK3-204ENST00000593912 IGFL1Q6UW32 110 aa1.26□□□□□ -2.21
VRK3-204ENST00000593912 Q8IZM0 81 aa1.26□□□□□ -2.21
VRK3-204ENST00000593912 RAB24Q969Q5 203 aa1.26□□□□□ -2.21
VRK3-204ENST00000593912 Q9BRP9 147 aa1.26□□□□□ -2.21
VRK3-204ENST00000593912 TRBV6-5A0A0K0K1A5 114 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 ETDCA0A1B0GVM5 59 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 A0A1W2PNM2 257 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 A8MUU9 505 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 FAM25EA8MYX2 175 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 IFNA1P01562 189 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 CDC34P49427 236 aaPredicted RBP1.25□□□□□ -2.21
VRK3-204ENST00000593912 POLR2KP53803 58 aaKnown RBP1.25□□□□□ -2.21
VRK3-204ENST00000593912 AQP4P55087 323 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 KRTAP12-2P59991 146 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 HBBP68871 147 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 MT1XP80297 61 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 RAB32Q13637 225 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 KRTAP20-2Q3LI61 65 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 ST20-AS1Q8NBB2 130 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 FMC1Q96HJ9 113 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 EIF5A2Q9GZV4 153 aaKnown RBP1.25□□□□□ -2.21
VRK3-204ENST00000593912 RBM38Q9H0Z9 239 aaKnown RBP1.25□□□□□ -2.21
VRK3-204ENST00000593912 ST20Q9HBF5 79 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 RAB26Q9ULW5 256 aa1.25□□□□□ -2.21
VRK3-204ENST00000593912 A0A1W2PRE2 83 aa1.24□□□□□ -2.21
VRK3-204ENST00000593912 PRYO14603 147 aa1.24□□□□□ -2.21
VRK3-204ENST00000593912 PVALBP20472 110 aaPredicted RBP1.24□□□□□ -2.21
VRK3-204ENST00000593912 FCER1GP30273 86 aa1.24□□□□□ -2.21
VRK3-204ENST00000593912 TWIST1Q15672 202 aa1.24□□□□□ -2.21
VRK3-204ENST00000593912 ZC2HC1BQ5TFG8 222 aa1.24□□□□□ -2.21
VRK3-204ENST00000593912 Q5XG85 94 aa1.24□□□□□ -2.21
VRK3-204ENST00000593912 Q6ZN92 141 aa1.24□□□□□ -2.21
VRK3-204ENST00000593912 MTURNQ8N3F0 131 aa1.24□□□□□ -2.21
VRK3-204ENST00000593912 ZNF625Q96I27 306 aaPredicted RBP1.24□□□□□ -2.21
VRK3-204ENST00000593912 FAM210AQ96ND0 272 aa1.24□□□□□ -2.21
VRK3-204ENST00000593912 TIMM21Q9BVV7 248 aa1.24□□□□□ -2.21
VRK3-204ENST00000593912 SMIM3Q9BZL3 60 aa1.24□□□□□ -2.21
VRK3-204ENST00000593912 TRBV27A0A0K0K1C4 114 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 FAM236AA0A1B0GUQ0 79 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 FAM236BA0A1B0GV22 79 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 FAM74A7A6NL05 159 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 B5MCH6 92 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 PFN2P35080 140 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 SPRR1AP35321 89 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 AKR1C3P42330 323 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 MRPS10P82664 201 aaKnown RBP1.23□□□□□ -2.21
VRK3-204ENST00000593912 SMAGPQ0VAQ4 97 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 NEDD8Q15843 81 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 HIST1H2BAQ96A08 127 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 CNBD2Q96M20 576 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 SND1-IT1Q9HBX3 110 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 TMEM167BQ9NRX6 74 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 BLOC1S6Q9UL45 172 aa1.23□□□□□ -2.21
VRK3-204ENST00000593912 SMKR1H3BMG3 65 aa1.22□□□□□ -2.21
VRK3-204ENST00000593912 CXorf1O96002 111 aa1.22□□□□□ -2.21
VRK3-204ENST00000593912 GIPP09681 153 aaPredicted RBP1.22□□□□□ -2.21
VRK3-204ENST00000593912 VBP1P61758 197 aa1.22□□□□□ -2.21
VRK3-204ENST00000593912 MRPS36P82909 103 aaKnown RBP1.22□□□□□ -2.21
VRK3-204ENST00000593912 RPL24P83731 157 aaKnown RBP1.22□□□□□ -2.21
VRK3-204ENST00000593912 CD164Q04900 197 aa1.22□□□□□ -2.21
VRK3-204ENST00000593912 LINC01561Q8N1V8 128 aa1.22□□□□□ -2.21
VRK3-204ENST00000593912 SCGB1C1Q8TD33 95 aa1.22□□□□□ -2.21
VRK3-204ENST00000593912 TRAV9-1A0A075B6T8 112 aa1.21□□□□□ -2.22
VRK3-204ENST00000593912 F2Z2F3 143 aa1.21□□□□□ -2.22
VRK3-204ENST00000593912 NCR3O14931 201 aa1.21□□□□□ -2.22
VRK3-204ENST00000593912 RGS5O15539 181 aa1.21□□□□□ -2.22
VRK3-204ENST00000593912 CXCL5P42830 114 aa1.21□□□□□ -2.22
VRK3-204ENST00000593912 SUMO2P61956 95 aaKnown RBP1.21□□□□□ -2.22
VRK3-204ENST00000593912 IL15RAQ13261 267 aa1.21□□□□□ -2.22
VRK3-204ENST00000593912 TEX261Q6UWH6 196 aa1.21□□□□□ -2.22
VRK3-204ENST00000593912 BAGE2Q86Y30 109 aa1.21□□□□□ -2.22
VRK3-204ENST00000593912 FAM218AQ96MZ4 157 aa1.21□□□□□ -2.22
VRK3-204ENST00000593912 CYSTM1Q9H1C7 97 aa1.21□□□□□ -2.22
VRK3-204ENST00000593912 IGLV4-3A0A075B6K6 122 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 H0YIZ8 118 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 VCYO14598 125 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 ATP5HO75947 161 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 NDUFB6O95139 128 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 FAUP35544 74 aaKnown RBP1.2□□□□□ -2.22
VRK3-204ENST00000593912 ZNF726P1Q15940 193 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 STOML3Q8TAV4 291 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 COX7B2Q8TF08 81 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 TMEM18Q96B42 140 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 TMEM191AQ9H0A3 160 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 VCXQ9H320 206 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 KCNQ1DNQ9H478 68 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 SPANXA1Q9NS26 97 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms