RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ALKBH7Q9BT30 221 aaPredicted RBP6.25□□□□□ -1.41
USE1-203ENST00000593597 ANAPC11Q9NYG5 84 aa6.25□□□□□ -1.41
USE1-203ENST00000593597 SMIM1B2RUZ4 78 aa6.24□□□□□ -1.41
USE1-203ENST00000593597 PRSS2P07478 247 aa6.24□□□□□ -1.41
USE1-203ENST00000593597 CKS1BP61024 79 aa6.24□□□□□ -1.41
USE1-203ENST00000593597 MRPL55Q7Z7F7 128 aaKnown RBP6.24□□□□□ -1.41
USE1-203ENST00000593597 LINC00167Q96N53 147 aa6.24□□□□□ -1.41
USE1-203ENST00000593597 KRTAP9-2Q9BYQ4 174 aa6.24□□□□□ -1.41
USE1-203ENST00000593597 VCX2Q9H322 139 aa6.24□□□□□ -1.41
USE1-203ENST00000593597 TP73-AS1Q9UF72 201 aa6.24□□□□□ -1.41
USE1-203ENST00000593597 F8VRH5 84 aa6.23□□□□□ -1.41
USE1-203ENST00000593597 BCE1O60756 84 aa6.23□□□□□ -1.41
USE1-203ENST00000593597 NPSP0C0P6 89 aa6.23□□□□□ -1.41
USE1-203ENST00000593597 ORMDL2Q53FV1 153 aa6.23□□□□□ -1.41
USE1-203ENST00000593597 C6orf226Q5I0X4 101 aa6.23□□□□□ -1.41
USE1-203ENST00000593597 RPL37AP8A6NKH3 93 aa6.22□□□□□ -1.41
USE1-203ENST00000593597 SCO1O75880 301 aa6.22□□□□□ -1.41
USE1-203ENST00000593597 ADCYAP1P18509 176 aa6.22□□□□□ -1.41
USE1-203ENST00000593597 TOMM6Q96B49 74 aa6.22□□□□□ -1.41
USE1-203ENST00000593597 TIMM17AQ99595 171 aa6.22□□□□□ -1.41
USE1-203ENST00000593597 IGLV5-45A0A087WSX0 123 aa6.21□□□□□ -1.42
USE1-203ENST00000593597 GAGE10A6NGK3 116 aa6.21□□□□□ -1.42
USE1-203ENST00000593597 HERVK_113P63121 156 aa6.21□□□□□ -1.42
USE1-203ENST00000593597 LBHQ53QV2 105 aaPredicted RBP6.21□□□□□ -1.42
USE1-203ENST00000593597 RETNLBQ9BQ08 111 aa6.21□□□□□ -1.42
USE1-203ENST00000593597 IGLV5-37A0A075B6J1 123 aa6.2□□□□□ -1.42
USE1-203ENST00000593597 K7EMI3 77 aa6.2□□□□□ -1.42
USE1-203ENST00000593597 RPL28P46779 137 aaKnown RBP6.2□□□□□ -1.42
USE1-203ENST00000593597 KIAA1644Q3SXP7 199 aa6.2□□□□□ -1.42
USE1-203ENST00000593597 TYMSOSQ8TAI1 123 aa6.2□□□□□ -1.42
USE1-203ENST00000593597 NXT2Q9NPJ8 142 aaKnown RBP6.2□□□□□ -1.42
USE1-203ENST00000593597 CRYGAP11844 174 aa6.19□□□□□ -1.42
USE1-203ENST00000593597 CXCL5P42830 114 aa6.19□□□□□ -1.42
USE1-203ENST00000593597 PNRC1Q12796 327 aaPredicted RBP6.19□□□□□ -1.42
USE1-203ENST00000593597 Q8NDZ9 215 aa6.19□□□□□ -1.42
USE1-203ENST00000593597 COX7B2Q8TF08 81 aa6.19□□□□□ -1.42
USE1-203ENST00000593597 ANAPC16Q96DE5 110 aa6.19□□□□□ -1.42
USE1-203ENST00000593597 TINCRA0A1B0GVN0 87 aa6.18□□□□□ -1.42
USE1-203ENST00000593597 MT-ND4LP03901 98 aa6.18□□□□□ -1.42
USE1-203ENST00000593597 SEC11AP67812 179 aa6.18□□□□□ -1.42
USE1-203ENST00000593597 PDZD11Q5EBL8 140 aa6.18□□□□□ -1.42
USE1-203ENST00000593597 GEMIN7Q9H840 131 aaKnown RBP6.18□□□□□ -1.42
USE1-203ENST00000593597 LINC01546A6NGU7 62 aa6.17□□□□□ -1.42
USE1-203ENST00000593597 SPINK8P0C7L1 97 aa6.17□□□□□ -1.42
USE1-203ENST00000593597 ERASQ7Z444 233 aa6.17□□□□□ -1.42
USE1-203ENST00000593597 RAB5BP61020 215 aa6.16□□□□□ -1.42
USE1-203ENST00000593597 SCGB3A1Q96QR1 104 aa6.16□□□□□ -1.42
USE1-203ENST00000593597 IGKV2-28A0A075B6P5 120 aa6.15□□□□□ -1.42
USE1-203ENST00000593597 IGKV2D-28P01615 120 aa6.15□□□□□ -1.42
USE1-203ENST00000593597 VPREB1P12018 145 aa6.15□□□□□ -1.42
USE1-203ENST00000593597 PRLHP81277 87 aa6.15□□□□□ -1.42
USE1-203ENST00000593597 PAPPA-AS1Q5QFB9 102 aa6.15□□□□□ -1.42
USE1-203ENST00000593597 CST9LQ9H4G1 147 aa6.15□□□□□ -1.42
USE1-203ENST00000593597 TMEM238C9JI98 176 aa6.14□□□□□ -1.43
USE1-203ENST00000593597 FAM229BQ4G0N7 80 aa6.14□□□□□ -1.43
USE1-203ENST00000593597 LINC00304Q8N9R0 145 aa6.14□□□□□ -1.43
USE1-203ENST00000593597 A0A096LNJ9 63 aa6.13□□□□□ -1.43
USE1-203ENST00000593597 IGLV5-39A0A0G2JS06 123 aa6.13□□□□□ -1.43
USE1-203ENST00000593597 A0A0U1RQV1 116 aa6.13□□□□□ -1.43
USE1-203ENST00000593597 UBE2AP49459 152 aa6.13□□□□□ -1.43
USE1-203ENST00000593597 C3orf22Q8N5N4 141 aa6.13□□□□□ -1.43
USE1-203ENST00000593597 M0R378 163 aa6.12□□□□□ -1.43
USE1-203ENST00000593597 TPRXLQ17RH7 258 aa6.12□□□□□ -1.43
USE1-203ENST00000593597 NKAPP1Q8N9T2 125 aa6.12□□□□□ -1.43
USE1-203ENST00000593597 URB1-AS1Q96HZ7 61 aa6.12□□□□□ -1.43
USE1-203ENST00000593597 TMEM126AQ9H061 195 aa6.12□□□□□ -1.43
USE1-203ENST00000593597 IGLC3P0DOY3 106 aa6.11□□□□□ -1.43
USE1-203ENST00000593597 ZNF22P17026 224 aaPredicted RBP6.11□□□□□ -1.43
USE1-203ENST00000593597 G0S2P27469 103 aa6.11□□□□□ -1.43
USE1-203ENST00000593597 PFN2P35080 140 aa6.11□□□□□ -1.43
USE1-203ENST00000593597 PMVKQ15126 192 aa6.11□□□□□ -1.43
USE1-203ENST00000593597 SND1-IT1Q9HBX3 110 aa6.11□□□□□ -1.43
USE1-203ENST00000593597 PLEKHB2Q96CS7 222 aa6.1□□□□□ -1.43
USE1-203ENST00000593597 IGLV7-46A0A075B6I9 117 aa6.09□□□□□ -1.43
USE1-203ENST00000593597 FAM19A1Q7Z5A9 133 aa6.09□□□□□ -1.43
USE1-203ENST00000593597 GNB1LQ9BYB4 327 aa6.09□□□□□ -1.43
USE1-203ENST00000593597 ERG28Q9UKR5 140 aa6.09□□□□□ -1.43
USE1-203ENST00000593597 TRAV9-1A0A075B6T8 112 aa6.08□□□□□ -1.44
USE1-203ENST00000593597 KRTAP9-6A0A140TA67 174 aa6.08□□□□□ -1.44
USE1-203ENST00000593597 ATP5LO75964 103 aa6.08□□□□□ -1.44
USE1-203ENST00000593597 CLLU1Q5K131 121 aa6.08□□□□□ -1.44
USE1-203ENST00000593597 ZNF625Q96I27 306 aaPredicted RBP6.08□□□□□ -1.44
USE1-203ENST00000593597 MRPL18Q9H0U6 180 aaKnown RBP6.08□□□□□ -1.44
USE1-203ENST00000593597 IGKV2D-26A0A0A0MRZ7 120 aa6.07□□□□□ -1.44
USE1-203ENST00000593597 TMEM218A2RU14 115 aa6.07□□□□□ -1.44
USE1-203ENST00000593597 KRTAP4-1Q9BYQ7 146 aa6.07□□□□□ -1.44
USE1-203ENST00000593597 CDIP1Q9H305 208 aa6.07□□□□□ -1.44
USE1-203ENST00000593597 C11orf86A6NJI1 115 aa6.06□□□□□ -1.44
USE1-203ENST00000593597 H3BRM9 83 aa6.06□□□□□ -1.44
USE1-203ENST00000593597 IFITM2Q01629 132 aa6.06□□□□□ -1.44
USE1-203ENST00000593597 FA2HQ7L5A8 372 aa6.06□□□□□ -1.44
USE1-203ENST00000593597 PPDPFQ9H3Y8 114 aa6.06□□□□□ -1.44
USE1-203ENST00000593597 LINC01549A6NIU2 74 aa6.05□□□□□ -1.44
USE1-203ENST00000593597 RAB14P61106 215 aa6.05□□□□□ -1.44
USE1-203ENST00000593597 PMCHL1Q16048 86 aa6.05□□□□□ -1.44
USE1-203ENST00000593597 SPRR4Q96PI1 79 aa6.05□□□□□ -1.44
USE1-203ENST00000593597 CTAG1AP78358 180 aa6.04□□□□□ -1.44
USE1-203ENST00000593597 FABP9Q0Z7S8 132 aa6.04□□□□□ -1.44
USE1-203ENST00000593597 CBLN2Q8IUK8 224 aa6.04□□□□□ -1.44
USE1-203ENST00000593597 C18orf32Q8TCD1 76 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms