RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 PACRGQ96M98 296 aaPredicted RBP10.49□□□□□ -0.73
RETREG3-210ENST00000590541 LINC01546A6NGU7 62 aa10.47□□□□□ -0.73
RETREG3-210ENST00000590541 PRR4Q16378 134 aa10.47□□□□□ -0.73
RETREG3-210ENST00000590541 Q8IZM0 81 aa10.47□□□□□ -0.73
RETREG3-210ENST00000590541 ALKBH7Q9BT30 221 aaPredicted RBP10.47□□□□□ -0.73
RETREG3-210ENST00000590541 CARHSP1Q9Y2V2 147 aaKnown RBP10.47□□□□□ -0.73
RETREG3-210ENST00000590541 NDUFC2-KCTD14E9PQ53 114 aa10.46□□□□□ -0.73
RETREG3-210ENST00000590541 ZC2HC1BQ5TFG8 222 aa10.46□□□□□ -0.73
RETREG3-210ENST00000590541 SCGB3A1Q96QR1 104 aa10.46□□□□□ -0.73
RETREG3-210ENST00000590541 GEMIN7Q9H840 131 aaKnown RBP10.46□□□□□ -0.73
RETREG3-210ENST00000590541 CKS1BP61024 79 aa10.45□□□□□ -0.74
RETREG3-210ENST00000590541 C6orf226Q5I0X4 101 aa10.45□□□□□ -0.74
RETREG3-210ENST00000590541 PHF5AQ7RTV0 110 aaKnown RBP10.45□□□□□ -0.74
RETREG3-210ENST00000590541 DIRC1Q969H9 104 aa10.45□□□□□ -0.74
RETREG3-210ENST00000590541 GAGE2EQ4V326 116 aa10.44□□□□□ -0.74
RETREG3-210ENST00000590541 C2orf82Q6UX34 121 aa10.44□□□□□ -0.74
RETREG3-210ENST00000590541 RPS10P5Q9NQ39 176 aa10.44□□□□□ -0.74
RETREG3-210ENST00000590541 GAGE2DQ9UEU5 116 aa10.44□□□□□ -0.74
RETREG3-210ENST00000590541 IGLV7-43P04211 117 aa10.43□□□□□ -0.74
RETREG3-210ENST00000590541 FABP9Q0Z7S8 132 aa10.43□□□□□ -0.74
RETREG3-210ENST00000590541 MRPL18Q9H0U6 180 aaKnown RBP10.43□□□□□ -0.74
RETREG3-210ENST00000590541 CDKN2A-AS1Q9UH64 79 aa10.43□□□□□ -0.74
RETREG3-210ENST00000590541 IGLV1-50A0A075B6I6 118 aa10.42□□□□□ -0.74
RETREG3-210ENST00000590541 H0Y9J4 135 aa10.42□□□□□ -0.74
RETREG3-210ENST00000590541 CXCL5P42830 114 aa10.42□□□□□ -0.74
RETREG3-210ENST00000590541 FA2HQ7L5A8 372 aa10.42□□□□□ -0.74
RETREG3-210ENST00000590541 SMCO4Q9NRQ5 59 aa10.42□□□□□ -0.74
RETREG3-210ENST00000590541 TOMM7Q9P0U1 55 aa10.42□□□□□ -0.74
RETREG3-210ENST00000590541 TINCRA0A1B0GVN0 87 aa10.41□□□□□ -0.74
RETREG3-210ENST00000590541 KRTAP1-4P0C5Y4 121 aa10.41□□□□□ -0.74
RETREG3-210ENST00000590541 F8VRH5 84 aa10.4□□□□□ -0.74
RETREG3-210ENST00000590541 FAM19A5Q7Z5A7 132 aaPredicted RBP10.4□□□□□ -0.74
RETREG3-210ENST00000590541 FAM168BA1KXE4 195 aa10.39□□□□□ -0.75
RETREG3-210ENST00000590541 PDZD11Q5EBL8 140 aa10.39□□□□□ -0.75
RETREG3-210ENST00000590541 KRTAP11-1Q8IUC1 163 aa10.39□□□□□ -0.75
RETREG3-210ENST00000590541 LINC00469Q8N7U9 141 aa10.39□□□□□ -0.75
RETREG3-210ENST00000590541 IGLV5-45A0A087WSX0 123 aa10.38□□□□□ -0.75
RETREG3-210ENST00000590541 M0QXV9 152 aa10.38□□□□□ -0.75
RETREG3-210ENST00000590541 PMVKQ15126 192 aa10.38□□□□□ -0.75
RETREG3-210ENST00000590541 NDUFA5Q16718 116 aa10.38□□□□□ -0.75
RETREG3-210ENST00000590541 CST9LQ9H4G1 147 aa10.38□□□□□ -0.75
RETREG3-210ENST00000590541 C9orf129Q5T035 196 aaKnown RBP10.37□□□□□ -0.75
RETREG3-210ENST00000590541 SMIM1B2RUZ4 78 aa10.36□□□□□ -0.75
RETREG3-210ENST00000590541 SNAPINO95295 136 aa10.36□□□□□ -0.75
RETREG3-210ENST00000590541 TRAPPC1Q9Y5R8 145 aa10.36□□□□□ -0.75
RETREG3-210ENST00000590541 UBE2BP63146 152 aa10.35□□□□□ -0.75
RETREG3-210ENST00000590541 KRTAP7-1Q8IUC3 87 aa10.35□□□□□ -0.75
RETREG3-210ENST00000590541 SVBPQ8N300 66 aa10.35□□□□□ -0.75
RETREG3-210ENST00000590541 H3BRM9 83 aa10.34□□□□□ -0.75
RETREG3-210ENST00000590541 APOC3P02656 99 aa10.34□□□□□ -0.75
RETREG3-210ENST00000590541 COX7B2Q8TF08 81 aa10.34□□□□□ -0.75
RETREG3-210ENST00000590541 LINC00614P0C842 121 aa10.33□□□□□ -0.76
RETREG3-210ENST00000590541 RAB5BP61020 215 aa10.33□□□□□ -0.76
RETREG3-210ENST00000590541 LBHQ53QV2 105 aaPredicted RBP10.33□□□□□ -0.76
RETREG3-210ENST00000590541 C18orf32Q8TCD1 76 aa10.33□□□□□ -0.76
RETREG3-210ENST00000590541 RPL13AP40429 203 aaKnown RBP10.32□□□□□ -0.76
RETREG3-210ENST00000590541 HBDP02042 147 aa10.31□□□□□ -0.76
RETREG3-210ENST00000590541 TP73-AS1Q9UF72 201 aa10.31□□□□□ -0.76
RETREG3-210ENST00000590541 IGLC3P0DOY3 106 aa10.3□□□□□ -0.76
RETREG3-210ENST00000590541 LCE2DQ5TA82 110 aaPredicted RBP10.3□□□□□ -0.76
RETREG3-210ENST00000590541 A0A096LNJ9 63 aa10.29□□□□□ -0.76
RETREG3-210ENST00000590541 NUPR1O60356 82 aa10.29□□□□□ -0.76
RETREG3-210ENST00000590541 ATP5LO75964 103 aa10.29□□□□□ -0.76
RETREG3-210ENST00000590541 XAGE1AQ9HD64 81 aa10.29□□□□□ -0.76
RETREG3-210ENST00000590541 C22orf24Q9Y442 160 aa10.29□□□□□ -0.76
RETREG3-210ENST00000590541 SPINK8P0C7L1 97 aa10.28□□□□□ -0.76
RETREG3-210ENST00000590541 NDUFA6P56556 154 aa10.27□□□□□ -0.77
RETREG3-210ENST00000590541 URB1-AS1Q96HZ7 61 aa10.27□□□□□ -0.77
RETREG3-210ENST00000590541 MUC17Q685J3 4493 aa10.27□□□□□ -0.77
RETREG3-210ENST00000590541 IGLV5-39A0A0G2JS06 123 aa10.26□□□□□ -0.77
RETREG3-210ENST00000590541 TSPAN13O95857 204 aa10.26□□□□□ -0.77
RETREG3-210ENST00000590541 MRPL55Q7Z7F7 128 aaKnown RBP10.26□□□□□ -0.77
RETREG3-210ENST00000590541 SFTA2Q6UW10 78 aa10.25□□□□□ -0.77
RETREG3-210ENST00000590541 ZNF22P17026 224 aaPredicted RBP10.24□□□□□ -0.77
RETREG3-210ENST00000590541 ZNF861PO60384 105 aa10.23□□□□□ -0.77
RETREG3-210ENST00000590541 BAGE3Q86Y29 109 aa10.23□□□□□ -0.77
RETREG3-210ENST00000590541 CHCHD1Q96BP2 118 aaKnown RBP10.23□□□□□ -0.77
RETREG3-210ENST00000590541 IGLV5-37A0A075B6J1 123 aa10.22□□□□□ -0.77
RETREG3-210ENST00000590541 COX17Q14061 63 aa10.22□□□□□ -0.77
RETREG3-210ENST00000590541 PMCHL1Q16048 86 aa10.22□□□□□ -0.77
RETREG3-210ENST00000590541 YPEL4Q96NS1 127 aa10.21□□□□□ -0.77
RETREG3-210ENST00000590541 NKAPP1Q8N9T2 125 aa10.2□□□□□ -0.78
RETREG3-210ENST00000590541 BCE1O60756 84 aa10.19□□□□□ -0.78
RETREG3-210ENST00000590541 RPL28P46779 137 aaKnown RBP10.19□□□□□ -0.78
RETREG3-210ENST00000590541 TMEM170BQ5T4T1 132 aa10.19□□□□□ -0.78
RETREG3-210ENST00000590541 LINC00167Q96N53 147 aa10.19□□□□□ -0.78
RETREG3-210ENST00000590541 TRAV12-1A0A0B4J245 112 aa10.18□□□□□ -0.78
RETREG3-210ENST00000590541 C11orf86A6NJI1 115 aa10.18□□□□□ -0.78
RETREG3-210ENST00000590541 CHTOPQ9Y3Y2 248 aaKnown RBP10.18□□□□□ -0.78
RETREG3-210ENST00000590541 PFN2P35080 140 aa10.17□□□□□ -0.78
RETREG3-210ENST00000590541 IFI27L1Q96BM0 104 aa10.17□□□□□ -0.78
RETREG3-210ENST00000590541 ERG28Q9UKR5 140 aa10.17□□□□□ -0.78
RETREG3-210ENST00000590541 A0A087X002 238 aa10.16□□□□□ -0.78
RETREG3-210ENST00000590541 RPL24P83731 157 aaKnown RBP10.15□□□□□ -0.78
RETREG3-210ENST00000590541 RPL37AP8A6NKH3 93 aa10.14□□□□□ -0.79
RETREG3-210ENST00000590541 HSBP1O75506 76 aa10.13□□□□□ -0.79
RETREG3-210ENST00000590541 ZNF625Q96I27 306 aaPredicted RBP10.13□□□□□ -0.79
RETREG3-210ENST00000590541 SND1-IT1Q9HBX3 110 aa10.13□□□□□ -0.79
RETREG3-210ENST00000590541 GAGE10A6NGK3 116 aa10.12□□□□□ -0.79
RETREG3-210ENST00000590541 RETNLBQ9BQ08 111 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms