RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 SVBPQ8N300 66 aa13.17□□□□□ -0.3
LRP3-202ENST00000590275 TRBV30A0A0K0K1B3 111 aa13.16□□□□□ -0.3
LRP3-202ENST00000590275 SNAPINO95295 136 aa13.16□□□□□ -0.3
LRP3-202ENST00000590275 PAPPA-AS1Q5QFB9 102 aa13.16□□□□□ -0.3
LRP3-202ENST00000590275 C9orf129Q5T035 196 aaKnown RBP13.16□□□□□ -0.3
LRP3-202ENST00000590275 PMCHL1Q16048 86 aa13.15□□□□□ -0.3
LRP3-202ENST00000590275 Q8IZM0 81 aa13.15□□□□□ -0.3
LRP3-202ENST00000590275 PSORS1C2Q9UIG4 136 aa13.15□□□□□ -0.3
LRP3-202ENST00000590275 IGLV5-45A0A087WSX0 123 aa13.14□□□□□ -0.31
LRP3-202ENST00000590275 SMIM1B2RUZ4 78 aa13.14□□□□□ -0.31
LRP3-202ENST00000590275 GEMIN7Q9H840 131 aaKnown RBP13.14□□□□□ -0.31
LRP3-202ENST00000590275 TINCRA0A1B0GVN0 87 aa13.13□□□□□ -0.31
LRP3-202ENST00000590275 FAM19A5Q7Z5A7 132 aaPredicted RBP13.13□□□□□ -0.31
LRP3-202ENST00000590275 LINC00469Q8N7U9 141 aa13.13□□□□□ -0.31
LRP3-202ENST00000590275 SMCO4Q9NRQ5 59 aa13.13□□□□□ -0.31
LRP3-202ENST00000590275 NDUFC2-KCTD14E9PQ53 114 aa13.12□□□□□ -0.31
LRP3-202ENST00000590275 SEC11AP67812 179 aa13.12□□□□□ -0.31
LRP3-202ENST00000590275 C6orf226Q5I0X4 101 aa13.12□□□□□ -0.31
LRP3-202ENST00000590275 LINC00614P0C842 121 aa13.11□□□□□ -0.31
LRP3-202ENST00000590275 ODF1Q14990 250 aa13.11□□□□□ -0.31
LRP3-202ENST00000590275 PMVKQ15126 192 aa13.11□□□□□ -0.31
LRP3-202ENST00000590275 NDUFA5Q16718 116 aa13.11□□□□□ -0.31
LRP3-202ENST00000590275 PACRGQ96M98 296 aaPredicted RBP13.11□□□□□ -0.31
LRP3-202ENST00000590275 PRSS2P07478 247 aa13.1□□□□□ -0.31
LRP3-202ENST00000590275 CBLN2Q8IUK8 224 aa13.1□□□□□ -0.31
LRP3-202ENST00000590275 SPINK8P0C7L1 97 aa13.09□□□□□ -0.31
LRP3-202ENST00000590275 CKS1BP61024 79 aa13.09□□□□□ -0.31
LRP3-202ENST00000590275 PDZD11Q5EBL8 140 aa13.09□□□□□ -0.31
LRP3-202ENST00000590275 SPINK6Q6UWN8 80 aa13.09□□□□□ -0.31
LRP3-202ENST00000590275 LINC01549A6NIU2 74 aa13.08□□□□□ -0.32
LRP3-202ENST00000590275 SERTAD4-AS1Q5TG53 156 aa13.08□□□□□ -0.32
LRP3-202ENST00000590275 SLC7A5P1Q8MH63 180 aa13.08□□□□□ -0.32
LRP3-202ENST00000590275 LINC01600Q96MT4 127 aa13.08□□□□□ -0.32
LRP3-202ENST00000590275 F8VRH5 84 aa13.06□□□□□ -0.32
LRP3-202ENST00000590275 XAGE1AQ9HD64 81 aa13.06□□□□□ -0.32
LRP3-202ENST00000590275 HBDP02042 147 aa13.05□□□□□ -0.32
LRP3-202ENST00000590275 IGLC3P0DOY3 106 aa13.05□□□□□ -0.32
LRP3-202ENST00000590275 C1orf137Q5JT78 98 aa13.05□□□□□ -0.32
LRP3-202ENST00000590275 COX7B2Q8TF08 81 aa13.05□□□□□ -0.32
LRP3-202ENST00000590275 M0QXV9 152 aa13.04□□□□□ -0.32
LRP3-202ENST00000590275 ZNF22P17026 224 aaPredicted RBP13.02□□□□□ -0.33
LRP3-202ENST00000590275 NDUFA6P56556 154 aa13.02□□□□□ -0.33
LRP3-202ENST00000590275 KRTAP10-8P60410 259 aa13.02□□□□□ -0.33
LRP3-202ENST00000590275 IGLV5-39A0A0G2JS06 123 aa13□□□□□ -0.33
LRP3-202ENST00000590275 IGLV7-43P04211 117 aa13□□□□□ -0.33
LRP3-202ENST00000590275 C11orf86A6NJI1 115 aa12.99□□□□□ -0.33
LRP3-202ENST00000590275 CXCL5P42830 114 aa12.99□□□□□ -0.33
LRP3-202ENST00000590275 C22orf24Q9Y442 160 aa12.98□□□□□ -0.33
LRP3-202ENST00000590275 RAB5BP61020 215 aa12.97□□□□□ -0.33
LRP3-202ENST00000590275 BAGE3Q86Y29 109 aa12.97□□□□□ -0.33
LRP3-202ENST00000590275 LINC00310P59036 64 aa12.96□□□□□ -0.33
LRP3-202ENST00000590275 ATP5LO75964 103 aa12.95□□□□□ -0.34
LRP3-202ENST00000590275 TRGC2P03986 189 aa12.95□□□□□ -0.34
LRP3-202ENST00000590275 REG3GQ6UW15 175 aa12.95□□□□□ -0.34
LRP3-202ENST00000590275 UBR4Q5T4S7 5183 aa12.95□□□□□ -0.34
LRP3-202ENST00000590275 H3BRM9 83 aa12.94□□□□□ -0.34
LRP3-202ENST00000590275 UBE2BP63146 152 aa12.94□□□□□ -0.34
LRP3-202ENST00000590275 CHCHD1Q96BP2 118 aaKnown RBP12.94□□□□□ -0.34
LRP3-202ENST00000590275 FAM19A2Q8N3H0 131 aa12.93□□□□□ -0.34
LRP3-202ENST00000590275 PLA2G2DQ9UNK4 145 aa12.93□□□□□ -0.34
LRP3-202ENST00000590275 COLCA2A8K830 154 aa12.9□□□□□ -0.34
LRP3-202ENST00000590275 IFI27L1Q96BM0 104 aa12.9□□□□□ -0.34
LRP3-202ENST00000590275 CHTOPQ9Y3Y2 248 aaKnown RBP12.9□□□□□ -0.34
LRP3-202ENST00000590275 H0Y9J4 135 aa12.89□□□□□ -0.35
LRP3-202ENST00000590275 NUPR1O60356 82 aa12.89□□□□□ -0.35
LRP3-202ENST00000590275 TMEM170BQ5T4T1 132 aa12.89□□□□□ -0.35
LRP3-202ENST00000590275 SCO1O75880 301 aa12.88□□□□□ -0.35
LRP3-202ENST00000590275 KRTAP1-4P0C5Y4 121 aa12.88□□□□□ -0.35
LRP3-202ENST00000590275 MRPL55Q7Z7F7 128 aaKnown RBP12.88□□□□□ -0.35
LRP3-202ENST00000590275 Q8NDZ9 215 aa12.88□□□□□ -0.35
LRP3-202ENST00000590275 ZNF625Q96I27 306 aaPredicted RBP12.88□□□□□ -0.35
LRP3-202ENST00000590275 TRAV12-1A0A0B4J245 112 aa12.87□□□□□ -0.35
LRP3-202ENST00000590275 PFN2P35080 140 aa12.87□□□□□ -0.35
LRP3-202ENST00000590275 DIRC1Q969H9 104 aa12.87□□□□□ -0.35
LRP3-202ENST00000590275 LINC00167Q96N53 147 aa12.87□□□□□ -0.35
LRP3-202ENST00000590275 TP73-AS1Q9UF72 201 aa12.87□□□□□ -0.35
LRP3-202ENST00000590275 LRP2P98164 4655 aa12.86□□□□□ -0.35
LRP3-202ENST00000590275 IGLV5-37A0A075B6J1 123 aa12.85□□□□□ -0.35
LRP3-202ENST00000590275 TMEM223A0PJW6 202 aa12.85□□□□□ -0.35
LRP3-202ENST00000590275 GAGE10A6NGK3 116 aa12.85□□□□□ -0.35
LRP3-202ENST00000590275 RPL37AP8A6NKH3 93 aa12.85□□□□□ -0.35
LRP3-202ENST00000590275 SERF1AO75920 110 aa12.85□□□□□ -0.35
LRP3-202ENST00000590275 PRR26Q8N8Z3 221 aa12.85□□□□□ -0.35
LRP3-202ENST00000590275 HSBP1O75506 76 aa12.84□□□□□ -0.35
LRP3-202ENST00000590275 LBHQ53QV2 105 aaPredicted RBP12.84□□□□□ -0.35
LRP3-202ENST00000590275 ERG28Q9UKR5 140 aa12.84□□□□□ -0.35
LRP3-202ENST00000590275 SND1-IT1Q9HBX3 110 aa12.83□□□□□ -0.36
LRP3-202ENST00000590275 ZNF861PO60384 105 aa12.81□□□□□ -0.36
LRP3-202ENST00000590275 VPREB1P12018 145 aa12.8□□□□□ -0.36
LRP3-202ENST00000590275 H0Y8G0 127 aa12.77□□□□□ -0.37
LRP3-202ENST00000590275 BCE1O60756 84 aa12.77□□□□□ -0.37
LRP3-202ENST00000590275 A0A0U1RRA0 63 aa12.75□□□□□ -0.37
LRP3-202ENST00000590275 LEPROTL1O95214 131 aa12.75□□□□□ -0.37
LRP3-202ENST00000590275 TSPEAR-AS2P59090 65 aa12.75□□□□□ -0.37
LRP3-202ENST00000590275 COX17Q14061 63 aa12.75□□□□□ -0.37
LRP3-202ENST00000590275 KRTAP13-1Q8IUC0 172 aa12.75□□□□□ -0.37
LRP3-202ENST00000590275 IGKV2-28A0A075B6P5 120 aa12.74□□□□□ -0.37
LRP3-202ENST00000590275 IGKV2D-28P01615 120 aa12.74□□□□□ -0.37
LRP3-202ENST00000590275 FABP4P15090 132 aa12.74□□□□□ -0.37
LRP3-202ENST00000590275 NKAPP1Q8N9T2 125 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms