RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 ADAMTSL4-AS1Q5T5F5 129 aa17.25■□□□□ 0.35
SCAMP4-210ENST00000588555 CFAP161Q6P656 301 aa17.25■□□□□ 0.35
SCAMP4-210ENST00000588555 TMEM238C9JI98 176 aa17.24■□□□□ 0.35
SCAMP4-210ENST00000588555 CXCL5P42830 114 aa17.24■□□□□ 0.35
SCAMP4-210ENST00000588555 C3orf84H3BNL1 204 aa17.23■□□□□ 0.35
SCAMP4-210ENST00000588555 LINC00526Q96FQ7 95 aa17.23■□□□□ 0.35
SCAMP4-210ENST00000588555 CKS1BP61024 79 aa17.23■□□□□ 0.35
SCAMP4-210ENST00000588555 SRSF9Q13242 221 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCAMP4-210ENST00000588555 CEND1Q8N111 149 aa17.23■□□□□ 0.35
SCAMP4-210ENST00000588555 C6orf223Q8N319 242 aa17.23■□□□□ 0.35
SCAMP4-210ENST00000588555 COX11Q9Y6N1 276 aa17.23■□□□□ 0.35
SCAMP4-210ENST00000588555 BATFQ16520 125 aa17.22■□□□□ 0.35
SCAMP4-210ENST00000588555 TM2D2Q9BX73 214 aa17.22■□□□□ 0.35
SCAMP4-210ENST00000588555 GCSHP23434 173 aa17.2■□□□□ 0.34
SCAMP4-210ENST00000588555 NTN5Q8WTR8 489 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-210ENST00000588555 HIGD2BQ4VC39 106 aa17.2■□□□□ 0.34
SCAMP4-210ENST00000588555 SPANXDQ9BXN6 97 aa17.2■□□□□ 0.34
SCAMP4-210ENST00000588555 SPANXCQ9NY87 97 aa17.2■□□□□ 0.34
SCAMP4-210ENST00000588555 GVQW2A0A096LPI5 108 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-210ENST00000588555 FXYD2P54710 66 aa17.19■□□□□ 0.34
SCAMP4-210ENST00000588555 MEIG1Q5JSS6 88 aa17.19■□□□□ 0.34
SCAMP4-210ENST00000588555 SMIM13P0DJ93 91 aa17.18■□□□□ 0.34
SCAMP4-210ENST00000588555 CIRBPQ14011 172 aaKnown RBP17.18■□□□□ 0.34
SCAMP4-210ENST00000588555 KMT2AQ03164 3969 aa17.17■□□□□ 0.34
SCAMP4-210ENST00000588555 C10orf25Q5T742 122 aa17.17■□□□□ 0.34
SCAMP4-210ENST00000588555 ALMS1Q8TCU4 4167 aa17.17■□□□□ 0.34
SCAMP4-210ENST00000588555 A0A0U1RRA0 63 aa17.16■□□□□ 0.34
SCAMP4-210ENST00000588555 ZNF561-AS1K7EIQ3 104 aa17.16■□□□□ 0.34
SCAMP4-210ENST00000588555 UNQ6190/PRO20217Q6UXQ8 127 aa17.16■□□□□ 0.34
SCAMP4-210ENST00000588555 DAND5Q8N907 189 aa17.16■□□□□ 0.34
SCAMP4-210ENST00000588555 Q6ZVH6 145 aa17.15■□□□□ 0.34
SCAMP4-210ENST00000588555 ERG28Q9UKR5 140 aa17.15■□□□□ 0.34
SCAMP4-210ENST00000588555 USP17L23D6RBM5 183 aa17.15■□□□□ 0.34
SCAMP4-210ENST00000588555 LINC00476Q8WZB0 136 aa17.14■□□□□ 0.33
SCAMP4-210ENST00000588555 MUSTN1Q8IVN3 82 aa17.13■□□□□ 0.33
SCAMP4-210ENST00000588555 C2orf48Q96LS8 159 aa17.13■□□□□ 0.33
SCAMP4-210ENST00000588555 Q6ZR54 194 aa17.12■□□□□ 0.33
SCAMP4-210ENST00000588555 M0R2N4 97 aa17.12■□□□□ 0.33
SCAMP4-210ENST00000588555 DNAH6Q9C0G6 4158 aa17.11■□□□□ 0.33
SCAMP4-210ENST00000588555 EIF4EBP3O60516 100 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-210ENST00000588555 LY6G6CO95867 125 aa17.11■□□□□ 0.33
SCAMP4-210ENST00000588555 Q6ZRN7 208 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-210ENST00000588555 DNAH2Q9P225 4427 aa17.11■□□□□ 0.33
SCAMP4-210ENST00000588555 PFN2P35080 140 aa17.1■□□□□ 0.33
SCAMP4-210ENST00000588555 PTTG1IPP53801 180 aa17.1■□□□□ 0.33
SCAMP4-210ENST00000588555 C9orf116Q5BN46 136 aaPredicted RBP17.1■□□□□ 0.33
SCAMP4-210ENST00000588555 CAMK2N2Q96S95 79 aa17.1■□□□□ 0.33
SCAMP4-210ENST00000588555 LINC00158P58513 81 aa17.1■□□□□ 0.33
SCAMP4-210ENST00000588555 IFITM1P13164 125 aa17.09■□□□□ 0.33
SCAMP4-210ENST00000588555 MIR7-3HGQ8N6C7 128 aa17.09■□□□□ 0.33
SCAMP4-210ENST00000588555 C6orf48Q9UBA6 75 aa17.09■□□□□ 0.33
SCAMP4-210ENST00000588555 LECT2O14960 151 aa17.08■□□□□ 0.33
SCAMP4-210ENST00000588555 NPC2P61916 151 aa17.08■□□□□ 0.33
SCAMP4-210ENST00000588555 COX17Q14061 63 aa17.08■□□□□ 0.33
SCAMP4-210ENST00000588555 WFDC2Q14508 124 aa17.08■□□□□ 0.33
SCAMP4-210ENST00000588555 LBHQ53QV2 105 aaPredicted RBP17.08■□□□□ 0.33
SCAMP4-210ENST00000588555 LINC00308Q8TCZ7 52 aa17.08■□□□□ 0.33
SCAMP4-210ENST00000588555 F8WDY8 70 aa17.07■□□□□ 0.32
SCAMP4-210ENST00000588555 PSCAO43653 123 aa17.07■□□□□ 0.32
SCAMP4-210ENST00000588555 SOSTDC1Q6X4U4 206 aa17.07■□□□□ 0.32
SCAMP4-210ENST00000588555 COL5A1-AS1Q5SY13 56 aa17.07■□□□□ 0.32
SCAMP4-210ENST00000588555 Q6ZRU5 148 aa17.07■□□□□ 0.32
SCAMP4-210ENST00000588555 TRBV30A0A0K0K1B3 111 aa17.06■□□□□ 0.32
SCAMP4-210ENST00000588555 A6NDN8 102 aa17.05■□□□□ 0.32
SCAMP4-210ENST00000588555 RPL24P83731 157 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-210ENST00000588555 NHP2Q9NX24 153 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-210ENST00000588555 A4D1N5 150 aa17.05■□□□□ 0.32
SCAMP4-210ENST00000588555 TMEM238LA0A1B0GVL6 79 aa17.04■□□□□ 0.32
SCAMP4-210ENST00000588555 A6NJY4 79 aa17.04■□□□□ 0.32
SCAMP4-210ENST00000588555 SLPIP03973 132 aa17.04■□□□□ 0.32
SCAMP4-210ENST00000588555 A0A1B0GWB2 263 aa17.03■□□□□ 0.32
SCAMP4-210ENST00000588555 SYCNQ0VAF6 134 aa17.03■□□□□ 0.32
SCAMP4-210ENST00000588555 PPDPFQ9H3Y8 114 aa17.03■□□□□ 0.32
SCAMP4-210ENST00000588555 K7ERJ3 54 aa17.01■□□□□ 0.31
SCAMP4-210ENST00000588555 COPS9Q8WXC6 57 aa17■□□□□ 0.31
SCAMP4-210ENST00000588555 LRCOL1A6NCL2 159 aa17■□□□□ 0.31
SCAMP4-210ENST00000588555 CFC1BP0CG36 223 aa16.99■□□□□ 0.31
SCAMP4-210ENST00000588555 CFC1P0CG37 223 aa16.99■□□□□ 0.31
SCAMP4-210ENST00000588555 TAX1BP3O14907 124 aa16.97■□□□□ 0.31
SCAMP4-210ENST00000588555 CARD19Q96LW7 228 aa16.97■□□□□ 0.31
SCAMP4-210ENST00000588555 LOC107984156A0A0G2JMH3 177 aa16.97■□□□□ 0.31
SCAMP4-210ENST00000588555 ARL17AQ8IVW1 177 aa16.97■□□□□ 0.31
SCAMP4-210ENST00000588555 SND1-IT1Q9HBX3 110 aa16.96■□□□□ 0.31
SCAMP4-210ENST00000588555 RNF151Q2KHN1 245 aa16.95■□□□□ 0.3
SCAMP4-210ENST00000588555 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.94■□□□□ 0.3
SCAMP4-210ENST00000588555 C14orf177Q52M58 125 aa16.94■□□□□ 0.3
SCAMP4-210ENST00000588555 A0A0B4J2C4 111 aa16.92■□□□□ 0.3
SCAMP4-210ENST00000588555 HYDINQ4G0P3 5121 aa16.92■□□□□ 0.3
SCAMP4-210ENST00000588555 NDUFC2-KCTD14E9PQ53 114 aa16.92■□□□□ 0.3
SCAMP4-210ENST00000588555 C1orf134Q5TEV5 83 aa16.92■□□□□ 0.3
SCAMP4-210ENST00000588555 RAB37Q96AX2 223 aa16.92■□□□□ 0.3
SCAMP4-210ENST00000588555 SACSQ9NZJ4 4579 aa16.91■□□□□ 0.3
SCAMP4-210ENST00000588555 CNBPP62633 177 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-210ENST00000588555 DNAH17Q9UFH2 4485 aa16.9■□□□□ 0.3
SCAMP4-210ENST00000588555 TLX1NBP0CAT3 122 aa16.88■□□□□ 0.29
SCAMP4-210ENST00000588555 Q6ZRP5 223 aa16.88■□□□□ 0.29
SCAMP4-210ENST00000588555 PRO1854Q9UHT4 67 aa16.87■□□□□ 0.29
SCAMP4-210ENST00000588555 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-210ENST00000588555 IGKV2-28A0A075B6P5 120 aa16.85■□□□□ 0.29
SCAMP4-210ENST00000588555 A0A087WTM6 91 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 239.9 ms