RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 SND1-IT1Q9HBX3 110 aa11.03□□□□□ -0.64
TPGS1-202ENST00000588278 C11orf68Q9H3H3 251 aaKnown RBP11.02□□□□□ -0.64
TPGS1-202ENST00000588278 TEP1Q99973 2627 aaKnown RBP11.02□□□□□ -0.64
TPGS1-202ENST00000588278 PFN2P35080 140 aa11.02□□□□□ -0.65
TPGS1-202ENST00000588278 FAM222AQ5U5X8 452 aa11.02□□□□□ -0.65
TPGS1-202ENST00000588278 NTM-AS1Q6ZSK4 140 aa11.02□□□□□ -0.65
TPGS1-202ENST00000588278 SERP2Q8N6R1 65 aa11.02□□□□□ -0.65
TPGS1-202ENST00000588278 UPK3BQ9BT76 320 aa11.02□□□□□ -0.65
TPGS1-202ENST00000588278 NOP10Q9NPE3 64 aaKnown RBP11.02□□□□□ -0.65
TPGS1-202ENST00000588278 PDZD2O15018 2839 aa11.01□□□□□ -0.65
TPGS1-202ENST00000588278 F5H768 121 aa11.01□□□□□ -0.65
TPGS1-202ENST00000588278 LINC00158P58513 81 aa11.01□□□□□ -0.65
TPGS1-202ENST00000588278 KRTAP1-3Q8IUG1 177 aa11.01□□□□□ -0.65
TPGS1-202ENST00000588278 C1orf158Q8N1D5 194 aa11.01□□□□□ -0.65
TPGS1-202ENST00000588278 TRAV23DV6A0A075B6W5 121 aa11□□□□□ -0.65
TPGS1-202ENST00000588278 FHL2Q14192 279 aa11□□□□□ -0.65
TPGS1-202ENST00000588278 VWFP04275 2813 aa11□□□□□ -0.65
TPGS1-202ENST00000588278 RPL28P46779 137 aaKnown RBP10.99□□□□□ -0.65
TPGS1-202ENST00000588278 RPL36AP83881 106 aaKnown RBP10.99□□□□□ -0.65
TPGS1-202ENST00000588278 RPL36ALQ969Q0 106 aaKnown RBP10.99□□□□□ -0.65
TPGS1-202ENST00000588278 RNASE1P07998 156 aaKnown RBP10.98□□□□□ -0.65
TPGS1-202ENST00000588278 TRGV2A0A075B6R0 118 aa10.97□□□□□ -0.65
TPGS1-202ENST00000588278 TRAV13-2A0A0B4J235 113 aa10.97□□□□□ -0.65
TPGS1-202ENST00000588278 FAM19A1Q7Z5A9 133 aa10.97□□□□□ -0.65
TPGS1-202ENST00000588278 TMEM258P61165 79 aa10.97□□□□□ -0.65
TPGS1-202ENST00000588278 RPS28P62857 69 aaKnown RBP10.97□□□□□ -0.65
TPGS1-202ENST00000588278 LOC100131303A0A0U1RQF7 123 aa10.96□□□□□ -0.66
TPGS1-202ENST00000588278 CCL18P55774 89 aa10.96□□□□□ -0.66
TPGS1-202ENST00000588278 Q5XG85 94 aa10.96□□□□□ -0.66
TPGS1-202ENST00000588278 Q6JHZ5 121 aa10.96□□□□□ -0.66
TPGS1-202ENST00000588278 PAX4O43316 350 aa10.95□□□□□ -0.66
TPGS1-202ENST00000588278 COPS9Q8WXC6 57 aa10.95□□□□□ -0.66
TPGS1-202ENST00000588278 CDC42SE2Q9NRR3 84 aa10.95□□□□□ -0.66
TPGS1-202ENST00000588278 LINC01006Q8NI28 216 aa10.94□□□□□ -0.66
TPGS1-202ENST00000588278 GHRHP01286 108 aa10.94□□□□□ -0.66
TPGS1-202ENST00000588278 PRR3P79522 188 aaKnown RBP10.94□□□□□ -0.66
TPGS1-202ENST00000588278 SMR3AQ99954 134 aa10.94□□□□□ -0.66
TPGS1-202ENST00000588278 A8MTW9 85 aa10.93□□□□□ -0.66
TPGS1-202ENST00000588278 ENHOQ6UWT2 76 aa10.93□□□□□ -0.66
TPGS1-202ENST00000588278 C20orf197Q8N268 126 aa10.93□□□□□ -0.66
TPGS1-202ENST00000588278 TENM1Q9UKZ4 2725 aa10.93□□□□□ -0.66
TPGS1-202ENST00000588278 TRAV25A0A0B4J276 109 aa10.93□□□□□ -0.66
TPGS1-202ENST00000588278 SS18Q15532 418 aa10.93□□□□□ -0.66
TPGS1-202ENST00000588278 COX7B2Q8TF08 81 aa10.92□□□□□ -0.66
TPGS1-202ENST00000588278 TRRAPQ9Y4A5 3859 aa10.91□□□□□ -0.66
TPGS1-202ENST00000588278 K7EQD1 137 aa10.91□□□□□ -0.66
TPGS1-202ENST00000588278 UBE2L6O14933 153 aa10.91□□□□□ -0.66
TPGS1-202ENST00000588278 DEFB130BP0DP73 79 aa10.9□□□□□ -0.67
TPGS1-202ENST00000588278 DEFB130AP0DP74 79 aa10.9□□□□□ -0.67
TPGS1-202ENST00000588278 TRGV4A0A0C4DH28 118 aa10.89□□□□□ -0.67
TPGS1-202ENST00000588278 ATRQ13535 2644 aa10.89□□□□□ -0.67
TPGS1-202ENST00000588278 ANK3Q12955 4377 aaKnown RBP10.89□□□□□ -0.67
TPGS1-202ENST00000588278 OBSCN-AS1Q96MR7 158 aa10.88□□□□□ -0.67
TPGS1-202ENST00000588278 KMT2BQ9UMN6 2715 aaPredicted RBP10.88□□□□□ -0.67
TPGS1-202ENST00000588278 IGLV4-60A0A075B6I1 120 aa10.88□□□□□ -0.67
TPGS1-202ENST00000588278 PF4P02776 101 aa10.87□□□□□ -0.67
TPGS1-202ENST00000588278 TMEM243Q9BU79 118 aa10.87□□□□□ -0.67
TPGS1-202ENST00000588278 A0A096LPF7 62 aa10.86□□□□□ -0.67
TPGS1-202ENST00000588278 GIG44P09565 113 aaPredicted RBP10.86□□□□□ -0.67
TPGS1-202ENST00000588278 TMEM86BQ8N661 226 aa10.86□□□□□ -0.67
TPGS1-202ENST00000588278 ORMDL1Q9P0S3 153 aa10.86□□□□□ -0.67
TPGS1-202ENST00000588278 H0YGX0 51 aa10.85□□□□□ -0.67
TPGS1-202ENST00000588278 HIVEP1P15822 2718 aa10.85□□□□□ -0.67
TPGS1-202ENST00000588278 CCKP06307 115 aa10.84□□□□□ -0.67
TPGS1-202ENST00000588278 CLPSL2Q6UWE3 100 aa10.84□□□□□ -0.67
TPGS1-202ENST00000588278 OVOL2Q9BRP0 275 aa10.83□□□□□ -0.68
TPGS1-202ENST00000588278 SNURFQ9Y675 71 aa10.83□□□□□ -0.68
TPGS1-202ENST00000588278 FAM19A3Q7Z5A8 133 aa10.83□□□□□ -0.68
TPGS1-202ENST00000588278 M0R2N4 97 aa10.82□□□□□ -0.68
TPGS1-202ENST00000588278 WIPF1O43516 503 aa10.82□□□□□ -0.68
TPGS1-202ENST00000588278 DEFB4AO15263 64 aa10.81□□□□□ -0.68
TPGS1-202ENST00000588278 KRTAP1-1Q07627 177 aa10.81□□□□□ -0.68
TPGS1-202ENST00000588278 XCL1P47992 114 aa10.8□□□□□ -0.68
TPGS1-202ENST00000588278 C16orf74Q96GX8 76 aa10.8□□□□□ -0.68
TPGS1-202ENST00000588278 TRBV10-1A0A0K0K1A3 114 aa10.79□□□□□ -0.68
TPGS1-202ENST00000588278 PLAC8L1A1L4L8 177 aa10.79□□□□□ -0.68
TPGS1-202ENST00000588278 IGLV1-51P01701 117 aa10.79□□□□□ -0.68
TPGS1-202ENST00000588278 C6orf226Q5I0X4 101 aa10.79□□□□□ -0.68
TPGS1-202ENST00000588278 IL17DQ8TAD2 202 aa10.79□□□□□ -0.68
TPGS1-202ENST00000588278 IGHV3OR16-9A0A0B4J2B5 98 aa10.79□□□□□ -0.68
TPGS1-202ENST00000588278 LINC00336Q6ZUF6 198 aa10.79□□□□□ -0.68
TPGS1-202ENST00000588278 FAM236DA0A1B0GTK5 79 aa10.79□□□□□ -0.68
TPGS1-202ENST00000588278 TRBV6-4A0A1B0GX49 114 aa10.79□□□□□ -0.68
TPGS1-202ENST00000588278 FAM236CP0DP71 79 aa10.79□□□□□ -0.68
TPGS1-202ENST00000588278 SPATA3Q8NHX4 192 aa10.78□□□□□ -0.68
TPGS1-202ENST00000588278 LINC00482Q8N8I6 264 aa10.78□□□□□ -0.68
TPGS1-202ENST00000588278 J3QKU1 62 aa10.77□□□□□ -0.69
TPGS1-202ENST00000588278 NANOS2P60321 138 aaKnown RBP10.77□□□□□ -0.69
TPGS1-202ENST00000588278 RMI2Q96E14 147 aa10.77□□□□□ -0.69
TPGS1-202ENST00000588278 C19orf73Q9NVV2 129 aa10.77□□□□□ -0.69
TPGS1-202ENST00000588278 TRAV10A0A0B4J240 114 aa10.76□□□□□ -0.69
TPGS1-202ENST00000588278 IBA57-AS1B1ANH7 110 aa10.76□□□□□ -0.69
TPGS1-202ENST00000588278 HAMPP81172 84 aa10.76□□□□□ -0.69
TPGS1-202ENST00000588278 Q8N814 137 aa10.76□□□□□ -0.69
TPGS1-202ENST00000588278 C9orf116Q5BN46 136 aaPredicted RBP10.75□□□□□ -0.69
TPGS1-202ENST00000588278 H7BZZ5 65 aa10.75□□□□□ -0.69
TPGS1-202ENST00000588278 SCXQ7RTU7 201 aa10.75□□□□□ -0.69
TPGS1-202ENST00000588278 UBL5Q9BZL1 73 aa10.74□□□□□ -0.69
TPGS1-202ENST00000588278 NDUFC2O95298 119 aa10.74□□□□□ -0.69
TPGS1-202ENST00000588278 CSNK1G2-AS1Q8NCQ2 148 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms