RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 PAX4O43316 350 aa17.57■□□□□ 0.4
CAPNS1-204ENST00000587718 IGLV4-60A0A075B6I1 120 aa17.57■□□□□ 0.4
CAPNS1-204ENST00000587718 A0A087WZ39 114 aa17.57■□□□□ 0.4
CAPNS1-204ENST00000587718 SH2D6Q7Z4S9 175 aa17.57■□□□□ 0.4
CAPNS1-204ENST00000587718 LINC00308Q8TCZ7 52 aa17.57■□□□□ 0.4
CAPNS1-204ENST00000587718 ALMS1Q8TCU4 4167 aa17.57■□□□□ 0.4
CAPNS1-204ENST00000587718 IGHV4-28A0A0C4DH34 117 aa17.56■□□□□ 0.4
CAPNS1-204ENST00000587718 Q8NAQ8 132 aa17.56■□□□□ 0.4
CAPNS1-204ENST00000587718 COX7B2Q8TF08 81 aa17.55■□□□□ 0.4
CAPNS1-204ENST00000587718 COX6CP09669 75 aa17.54■□□□□ 0.4
CAPNS1-204ENST00000587718 DAD1P61803 113 aa17.54■□□□□ 0.4
CAPNS1-204ENST00000587718 ATXN8Q156A1 80 aa17.54■□□□□ 0.4
CAPNS1-204ENST00000587718 Q1RN00 199 aa17.54■□□□□ 0.4
CAPNS1-204ENST00000587718 ATP5G1P05496 136 aa17.53■□□□□ 0.4
CAPNS1-204ENST00000587718 ETDBQ3ZM63 59 aa17.53■□□□□ 0.4
CAPNS1-204ENST00000587718 LINC00959A0A1B0GUT2 108 aa17.53■□□□□ 0.4
CAPNS1-204ENST00000587718 NUPR2A6NF83 97 aa17.53■□□□□ 0.4
CAPNS1-204ENST00000587718 SPART-AS1P0CW21 52 aa17.53■□□□□ 0.4
CAPNS1-204ENST00000587718 LINC00476Q8WZB0 136 aa17.53■□□□□ 0.4
CAPNS1-204ENST00000587718 SMCPP49901 116 aaPredicted RBP17.52■□□□□ 0.39
CAPNS1-204ENST00000587718 MEIG1Q5JSS6 88 aa17.52■□□□□ 0.39
CAPNS1-204ENST00000587718 BIRC6Q9NR09 4857 aa17.51■□□□□ 0.39
CAPNS1-204ENST00000587718 SS18Q15532 418 aa17.51■□□□□ 0.39
CAPNS1-204ENST00000587718 ICOSQ9Y6W8 199 aa17.51■□□□□ 0.39
CAPNS1-204ENST00000587718 TRIAP1O43715 76 aa17.48■□□□□ 0.39
CAPNS1-204ENST00000587718 TEN1Q86WV5 123 aa17.48■□□□□ 0.39
CAPNS1-204ENST00000587718 IBA57-AS1B1ANH7 110 aa17.46■□□□□ 0.39
CAPNS1-204ENST00000587718 MRPL23Q16540 153 aaKnown RBP17.45■□□□□ 0.38
CAPNS1-204ENST00000587718 C11orf68Q9H3H3 251 aaKnown RBP17.45■□□□□ 0.38
CAPNS1-204ENST00000587718 TMEM262E9PQX1 116 aa17.45■□□□□ 0.38
CAPNS1-204ENST00000587718 H7C2G1 150 aa17.45■□□□□ 0.38
CAPNS1-204ENST00000587718 RPL13AP40429 203 aaKnown RBP17.45■□□□□ 0.38
CAPNS1-204ENST00000587718 PPDPFLQ8WWR9 84 aa17.45■□□□□ 0.38
CAPNS1-204ENST00000587718 KLK5Q9Y337 293 aaPredicted RBP17.45■□□□□ 0.38
CAPNS1-204ENST00000587718 LY6G6CO95867 125 aa17.44■□□□□ 0.38
CAPNS1-204ENST00000587718 FOXI1Q12951 378 aa17.44■□□□□ 0.38
CAPNS1-204ENST00000587718 LINC01620Q4KN68 170 aa17.43■□□□□ 0.38
CAPNS1-204ENST00000587718 SLC25A20O43772 301 aa17.42■□□□□ 0.38
CAPNS1-204ENST00000587718 SOSTDC1Q6X4U4 206 aa17.41■□□□□ 0.38
CAPNS1-204ENST00000587718 Q8IZM0 81 aa17.41■□□□□ 0.38
CAPNS1-204ENST00000587718 DAND5Q8N907 189 aa17.41■□□□□ 0.38
CAPNS1-204ENST00000587718 NPC2P61916 151 aa17.4■□□□□ 0.38
CAPNS1-204ENST00000587718 MTURNQ8N3F0 131 aa17.4■□□□□ 0.38
CAPNS1-204ENST00000587718 TRBV10-2A0A0K0K1G8 114 aa17.4■□□□□ 0.38
CAPNS1-204ENST00000587718 NANOS2P60321 138 aaKnown RBP17.4■□□□□ 0.38
CAPNS1-204ENST00000587718 C11orf45Q8TAV5 145 aa17.4■□□□□ 0.38
CAPNS1-204ENST00000587718 IGKV3OR2-268A0A0C4DH90 116 aa17.39■□□□□ 0.37
CAPNS1-204ENST00000587718 C9JAW5 83 aa17.39■□□□□ 0.37
CAPNS1-204ENST00000587718 LELP1Q5T871 98 aa17.39■□□□□ 0.37
CAPNS1-204ENST00000587718 CELA1Q9UNI1 258 aa17.39■□□□□ 0.37
CAPNS1-204ENST00000587718 TRAV13-2A0A0B4J235 113 aa17.38■□□□□ 0.37
CAPNS1-204ENST00000587718 H3BNG1 76 aa17.38■□□□□ 0.37
CAPNS1-204ENST00000587718 LST1O00453 97 aa17.38■□□□□ 0.37
CAPNS1-204ENST00000587718 DEFB4AO15263 64 aa17.38■□□□□ 0.37
CAPNS1-204ENST00000587718 H3BT86 120 aa17.37■□□□□ 0.37
CAPNS1-204ENST00000587718 CD164L2Q6UWJ8 174 aa17.37■□□□□ 0.37
CAPNS1-204ENST00000587718 ANKRD29Q8N6D5 301 aa17.37■□□□□ 0.37
CAPNS1-204ENST00000587718 CXCL5P42830 114 aa17.36■□□□□ 0.37
CAPNS1-204ENST00000587718 TOMM7Q9P0U1 55 aa17.36■□□□□ 0.37
CAPNS1-204ENST00000587718 C5orf38Q86SI9 138 aa17.36■□□□□ 0.37
CAPNS1-204ENST00000587718 KMT2AQ03164 3969 aa17.35■□□□□ 0.37
CAPNS1-204ENST00000587718 PCP4P48539 62 aa17.34■□□□□ 0.37
CAPNS1-204ENST00000587718 COX7A2LO14548 114 aa17.33■□□□□ 0.37
CAPNS1-204ENST00000587718 C6orf226Q5I0X4 101 aa17.33■□□□□ 0.37
CAPNS1-204ENST00000587718 MIR7-3HGQ8N6C7 128 aa17.33■□□□□ 0.37
CAPNS1-204ENST00000587718 GAGE12HA6NDE8 117 aa17.32■□□□□ 0.36
CAPNS1-204ENST00000587718 A0A0U1RRA0 63 aa17.31■□□□□ 0.36
CAPNS1-204ENST00000587718 XCL1P47992 114 aa17.31■□□□□ 0.36
CAPNS1-204ENST00000587718 LINC00158P58513 81 aa17.31■□□□□ 0.36
CAPNS1-204ENST00000587718 A0A096LPF7 62 aa17.3■□□□□ 0.36
CAPNS1-204ENST00000587718 REG3AQ06141 175 aa17.3■□□□□ 0.36
CAPNS1-204ENST00000587718 CARD19Q96LW7 228 aa17.3■□□□□ 0.36
CAPNS1-204ENST00000587718 LINC00269Q8N2A0 174 aa17.29■□□□□ 0.36
CAPNS1-204ENST00000587718 CRPP02741 224 aa17.28■□□□□ 0.36
CAPNS1-204ENST00000587718 COX17Q14061 63 aa17.28■□□□□ 0.36
CAPNS1-204ENST00000587718 SND1-IT1Q9HBX3 110 aa17.28■□□□□ 0.36
CAPNS1-204ENST00000587718 RPL28P46779 137 aaKnown RBP17.28■□□□□ 0.36
CAPNS1-204ENST00000587718 CHCHD10Q8WYQ3 142 aaPredicted RBP17.28■□□□□ 0.36
CAPNS1-204ENST00000587718 ANGP03950 147 aaKnown RBP17.27■□□□□ 0.35
CAPNS1-204ENST00000587718 SIGMAR1Q99720 223 aa17.27■□□□□ 0.35
CAPNS1-204ENST00000587718 TRACP01848 142 aa17.25■□□□□ 0.35
CAPNS1-204ENST00000587718 SCGB1A1P11684 91 aa17.25■□□□□ 0.35
CAPNS1-204ENST00000587718 PRR34Q9NV39 138 aa17.25■□□□□ 0.35
CAPNS1-204ENST00000587718 APLNQ9ULZ1 77 aa17.25■□□□□ 0.35
CAPNS1-204ENST00000587718 CCL18P55774 89 aa17.24■□□□□ 0.35
CAPNS1-204ENST00000587718 FRAS1Q86XX4 4008 aa17.24■□□□□ 0.35
CAPNS1-204ENST00000587718 KIAA0087Q14695 138 aa17.23■□□□□ 0.35
CAPNS1-204ENST00000587718 C2orf82Q6UX34 121 aa17.23■□□□□ 0.35
CAPNS1-204ENST00000587718 CFAP161Q6P656 301 aa17.23■□□□□ 0.35
CAPNS1-204ENST00000587718 VPS13DQ5THJ4 4388 aa17.22■□□□□ 0.35
CAPNS1-204ENST00000587718 CKS1BP61024 79 aa17.22■□□□□ 0.35
CAPNS1-204ENST00000587718 Q6ZTC4 211 aa17.22■□□□□ 0.35
CAPNS1-204ENST00000587718 CLEC2BQ92478 149 aa17.21■□□□□ 0.35
CAPNS1-204ENST00000587718 IGKV2-28A0A075B6P5 120 aa17.2■□□□□ 0.34
CAPNS1-204ENST00000587718 IGKV2D-28P01615 120 aa17.2■□□□□ 0.34
CAPNS1-204ENST00000587718 HTN3P15516 51 aa17.2■□□□□ 0.34
CAPNS1-204ENST00000587718 MALP21145 153 aa17.19■□□□□ 0.34
CAPNS1-204ENST00000587718 LYPD5Q6UWN5 251 aa17.19■□□□□ 0.34
CAPNS1-204ENST00000587718 TRAV10A0A0B4J240 114 aa17.19■□□□□ 0.34
CAPNS1-204ENST00000587718 TRAV8-4A0A0B4J246 113 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms