RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 CRPP02741 224 aa7.06□□□□□ -1.28
LIG3-203ENST00000585370 XCL1P47992 114 aa7.06□□□□□ -1.28
LIG3-203ENST00000585370 CCL18P55774 89 aa7.06□□□□□ -1.28
LIG3-203ENST00000585370 MIAQ16674 131 aa7.06□□□□□ -1.28
LIG3-203ENST00000585370 LINC01556Q5JQF7 62 aa7.06□□□□□ -1.28
LIG3-203ENST00000585370 C5orf38Q86SI9 138 aa7.06□□□□□ -1.28
LIG3-203ENST00000585370 NHP2Q9NX24 153 aaKnown RBP7.06□□□□□ -1.28
LIG3-203ENST00000585370 KLK12Q9UKR0 248 aa7.06□□□□□ -1.28
LIG3-203ENST00000585370 LY6G6CO95867 125 aa7.05□□□□□ -1.28
LIG3-203ENST00000585370 PRSS2P07478 247 aa7.05□□□□□ -1.28
LIG3-203ENST00000585370 CXCL5P42830 114 aa7.05□□□□□ -1.28
LIG3-203ENST00000585370 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
LIG3-203ENST00000585370 Q8IZM0 81 aa7.05□□□□□ -1.28
LIG3-203ENST00000585370 LITAFQ99732 161 aa7.05□□□□□ -1.28
LIG3-203ENST00000585370 MALP21145 153 aa7.04□□□□□ -1.28
LIG3-203ENST00000585370 ENHOQ6UWT2 76 aa7.04□□□□□ -1.28
LIG3-203ENST00000585370 MUSTN1Q8IVN3 82 aa7.04□□□□□ -1.28
LIG3-203ENST00000585370 TOMM7Q9P0U1 55 aa7.04□□□□□ -1.28
LIG3-203ENST00000585370 KLK5Q9Y337 293 aaPredicted RBP7.04□□□□□ -1.28
LIG3-203ENST00000585370 NUPR2A6NF83 97 aa7.03□□□□□ -1.28
LIG3-203ENST00000585370 IBA57-AS1B1ANH7 110 aa7.03□□□□□ -1.28
LIG3-203ENST00000585370 K7EP13 123 aa7.03□□□□□ -1.28
LIG3-203ENST00000585370 IGHV3-33P01772 117 aa7.03□□□□□ -1.28
LIG3-203ENST00000585370 DNAH10OSP0CZ25 163 aa7.03□□□□□ -1.28
LIG3-203ENST00000585370 FOXI1Q12951 378 aa7.03□□□□□ -1.28
LIG3-203ENST00000585370 MEIG1Q5JSS6 88 aa7.03□□□□□ -1.28
LIG3-203ENST00000585370 CLPSL2Q6UWE3 100 aa7.03□□□□□ -1.28
LIG3-203ENST00000585370 WFDC10BQ8IUB3 73 aa7.03□□□□□ -1.28
LIG3-203ENST00000585370 HERC2O95714 4834 aa7.03□□□□□ -1.28
LIG3-203ENST00000585370 HECTD4Q9Y4D8 3996 aa7.02□□□□□ -1.28
LIG3-203ENST00000585370 A0A0B4J2C4 111 aa7.02□□□□□ -1.29
LIG3-203ENST00000585370 GAGE12HA6NDE8 117 aa7.02□□□□□ -1.29
LIG3-203ENST00000585370 IGLL5B9A064 214 aa7.02□□□□□ -1.29
LIG3-203ENST00000585370 CFAP161Q6P656 301 aa7.02□□□□□ -1.29
LIG3-203ENST00000585370 UBE2WQ96B02 151 aa7.02□□□□□ -1.29
LIG3-203ENST00000585370 A4D1N5 150 aa7.01□□□□□ -1.29
LIG3-203ENST00000585370 CKS1BP61024 79 aa7.01□□□□□ -1.29
LIG3-203ENST00000585370 VAMP3Q15836 100 aa7.01□□□□□ -1.29
LIG3-203ENST00000585370 ADAMTSL4-AS1Q5T5F5 129 aa7.01□□□□□ -1.29
LIG3-203ENST00000585370 Q8N3U1 123 aa7.01□□□□□ -1.29
LIG3-203ENST00000585370 RAB37Q96AX2 223 aa7.01□□□□□ -1.29
LIG3-203ENST00000585370 UPK3BQ9BT76 320 aa7.01□□□□□ -1.29
LIG3-203ENST00000585370 KRTAP17-1Q9BYP8 105 aa7.01□□□□□ -1.29
LIG3-203ENST00000585370 DNAH6Q9C0G6 4158 aa7.01□□□□□ -1.29
LIG3-203ENST00000585370 IGLV10-54A0A075B6I4 117 aa7□□□□□ -1.29
LIG3-203ENST00000585370 F8WDY8 70 aa7□□□□□ -1.29
LIG3-203ENST00000585370 H3BUT2 72 aa7□□□□□ -1.29
LIG3-203ENST00000585370 CFC1BP0CG36 223 aa7□□□□□ -1.29
LIG3-203ENST00000585370 CFC1P0CG37 223 aa7□□□□□ -1.29
LIG3-203ENST00000585370 FABP2P12104 132 aa7□□□□□ -1.29
LIG3-203ENST00000585370 COX17Q14061 63 aa7□□□□□ -1.29
LIG3-203ENST00000585370 GTF2H5Q6ZYL4 71 aa7□□□□□ -1.29
LIG3-203ENST00000585370 PRO1854Q9UHT4 67 aa7□□□□□ -1.29
LIG3-203ENST00000585370 DNAH2Q9P225 4427 aa7□□□□□ -1.29
LIG3-203ENST00000585370 UBE2V1Q13404 147 aa6.99□□□□□ -1.29
LIG3-203ENST00000585370 KIAA0087Q14695 138 aa6.99□□□□□ -1.29
LIG3-203ENST00000585370 LYRM7Q5U5X0 104 aa6.99□□□□□ -1.29
LIG3-203ENST00000585370 LINC00308Q8TCZ7 52 aa6.99□□□□□ -1.29
LIG3-203ENST00000585370 RMI2Q96E14 147 aa6.99□□□□□ -1.29
LIG3-203ENST00000585370 C1orf43Q9BWL3 253 aa6.99□□□□□ -1.29
LIG3-203ENST00000585370 LINC00588Q9Y4M8 146 aa6.99□□□□□ -1.29
LIG3-203ENST00000585370 FAT2Q9NYQ8 4349 aa6.98□□□□□ -1.29
LIG3-203ENST00000585370 A0A1W2PPM0 123 aa6.98□□□□□ -1.29
LIG3-203ENST00000585370 K7ERJ3 54 aa6.98□□□□□ -1.29
LIG3-203ENST00000585370 LINC00158P58513 81 aa6.98□□□□□ -1.29
LIG3-203ENST00000585370 GAGE10A6NGK3 116 aa6.97□□□□□ -1.29
LIG3-203ENST00000585370 PGPEP1Q9NXJ5 209 aa6.97□□□□□ -1.29
LIG3-203ENST00000585370 ERG28Q9UKR5 140 aa6.97□□□□□ -1.29
LIG3-203ENST00000585370 SPAG11BQ08648 103 aa6.96□□□□□ -1.3
LIG3-203ENST00000585370 KRTAP26-1Q6PEX3 210 aa6.96□□□□□ -1.3
LIG3-203ENST00000585370 APLNQ9ULZ1 77 aa6.96□□□□□ -1.3
LIG3-203ENST00000585370 PKHD1P08F94 4074 aa6.95□□□□□ -1.3
LIG3-203ENST00000585370 GVQW2A0A096LPI5 108 aaPredicted RBP6.95□□□□□ -1.3
LIG3-203ENST00000585370 LOC107984156A0A0G2JMH3 177 aa6.95□□□□□ -1.3
LIG3-203ENST00000585370 K7EP34 96 aa6.95□□□□□ -1.3
LIG3-203ENST00000585370 ARL17AQ8IVW1 177 aa6.95□□□□□ -1.3
LIG3-203ENST00000585370 MIR7-3HGQ8N6C7 128 aa6.95□□□□□ -1.3
LIG3-203ENST00000585370 KIAA1109Q2LD37 5005 aa6.95□□□□□ -1.3
LIG3-203ENST00000585370 DNAH17Q9UFH2 4485 aa6.95□□□□□ -1.3
LIG3-203ENST00000585370 A0A0U1RRA0 63 aa6.94□□□□□ -1.3
LIG3-203ENST00000585370 ZNF561-AS1K7EIQ3 104 aa6.94□□□□□ -1.3
LIG3-203ENST00000585370 TSPAN13O95857 204 aa6.94□□□□□ -1.3
LIG3-203ENST00000585370 DAND5Q8N907 189 aa6.94□□□□□ -1.3
LIG3-203ENST00000585370 NTN5Q8WTR8 489 aaPredicted RBP6.94□□□□□ -1.3
LIG3-203ENST00000585370 C2orf48Q96LS8 159 aa6.94□□□□□ -1.3
LIG3-203ENST00000585370 SPCS1Q9Y6A9 102 aa6.94□□□□□ -1.3
LIG3-203ENST00000585370 TRBV20-1A0A075B6N2 111 aa6.93□□□□□ -1.3
LIG3-203ENST00000585370 IGKV2D-24A0A075B6R9 120 aa6.93□□□□□ -1.3
LIG3-203ENST00000585370 TRAV13-2A0A0B4J235 113 aa6.93□□□□□ -1.3
LIG3-203ENST00000585370 PFN2P35080 140 aa6.93□□□□□ -1.3
LIG3-203ENST00000585370 C2orf82Q6UX34 121 aa6.93□□□□□ -1.3
LIG3-203ENST00000585370 RYR1P21817 5038 aa6.92□□□□□ -1.3
LIG3-203ENST00000585370 TRBV30A0A0K0K1B3 111 aa6.92□□□□□ -1.3
LIG3-203ENST00000585370 COX6CP09669 75 aa6.92□□□□□ -1.3
LIG3-203ENST00000585370 NPC2P61916 151 aa6.92□□□□□ -1.3
LIG3-203ENST00000585370 SOSTDC1Q6X4U4 206 aa6.92□□□□□ -1.3
LIG3-203ENST00000585370 UBE2DNLQ8IWF7 75 aa6.92□□□□□ -1.3
LIG3-203ENST00000585370 NAA38Q9BRA0 125 aaKnown RBP6.92□□□□□ -1.3
LIG3-203ENST00000585370 SCGB1C2P0DMR2 95 aa6.91□□□□□ -1.3
LIG3-203ENST00000585370 PSMB2P49721 201 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms