RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TRBV10-1A0A0K0K1A3 114 aa7.15□□□□□ -1.27
RFFL-212ENST00000584655 M0R2N4 97 aa7.15□□□□□ -1.27
RFFL-212ENST00000584655 LEPROTO15243 131 aa7.15□□□□□ -1.27
RFFL-212ENST00000584655 TAL2Q16559 108 aa7.15□□□□□ -1.27
RFFL-212ENST00000584655 COL7A1Q02388 2944 aa7.14□□□□□ -1.27
RFFL-212ENST00000584655 PRSS47A8MTI9 375 aa7.14□□□□□ -1.27
RFFL-212ENST00000584655 TRBV6-4A0A1B0GX49 114 aa7.14□□□□□ -1.27
RFFL-212ENST00000584655 REG3AQ06141 175 aa7.14□□□□□ -1.27
RFFL-212ENST00000584655 TEN1Q86WV5 123 aa7.14□□□□□ -1.27
RFFL-212ENST00000584655 EDA2RQ9HAV5 297 aa7.14□□□□□ -1.27
RFFL-212ENST00000584655 TRAV8-4A0A0B4J246 113 aa7.14□□□□□ -1.27
RFFL-212ENST00000584655 A8MTW9 85 aa7.14□□□□□ -1.27
RFFL-212ENST00000584655 SS18Q15532 418 aa7.13□□□□□ -1.27
RFFL-212ENST00000584655 Q8NAQ8 132 aa7.13□□□□□ -1.27
RFFL-212ENST00000584655 CHCHD10Q8WYQ3 142 aaPredicted RBP7.13□□□□□ -1.27
RFFL-212ENST00000584655 CFAP161Q6P656 301 aa7.13□□□□□ -1.27
RFFL-212ENST00000584655 SMCPP49901 116 aaPredicted RBP7.13□□□□□ -1.27
RFFL-212ENST00000584655 SMIM1B2RUZ4 78 aa7.12□□□□□ -1.27
RFFL-212ENST00000584655 HERVK_113P63121 156 aa7.12□□□□□ -1.27
RFFL-212ENST00000584655 LINC00959A0A1B0GUT2 108 aa7.12□□□□□ -1.27
RFFL-212ENST00000584655 LINC01546A6NGU7 62 aa7.12□□□□□ -1.27
RFFL-212ENST00000584655 LINC01620Q4KN68 170 aa7.12□□□□□ -1.27
RFFL-212ENST00000584655 MRPL23Q16540 153 aaKnown RBP7.12□□□□□ -1.27
RFFL-212ENST00000584655 C15orf53Q8NAA6 179 aa7.11□□□□□ -1.27
RFFL-212ENST00000584655 ICOSQ9Y6W8 199 aa7.11□□□□□ -1.27
RFFL-212ENST00000584655 NCR3O14931 201 aa7.11□□□□□ -1.27
RFFL-212ENST00000584655 MRPS36P82909 103 aaKnown RBP7.11□□□□□ -1.27
RFFL-212ENST00000584655 AMELXQ99217 191 aa7.11□□□□□ -1.27
RFFL-212ENST00000584655 COX7B2Q8TF08 81 aa7.11□□□□□ -1.27
RFFL-212ENST00000584655 UNQ6190/PRO20217Q6UXQ8 127 aa7.11□□□□□ -1.27
RFFL-212ENST00000584655 SLPIP03973 132 aa7.1□□□□□ -1.27
RFFL-212ENST00000584655 DPH3Q96FX2 82 aa7.1□□□□□ -1.27
RFFL-212ENST00000584655 TINCRA0A1B0GVN0 87 aa7.1□□□□□ -1.27
RFFL-212ENST00000584655 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.1□□□□□ -1.27
RFFL-212ENST00000584655 CARD19Q96LW7 228 aa7.1□□□□□ -1.27
RFFL-212ENST00000584655 ATXN8Q156A1 80 aa7.09□□□□□ -1.27
RFFL-212ENST00000584655 RPL32P62910 135 aaKnown RBP7.09□□□□□ -1.27
RFFL-212ENST00000584655 C10orf25Q5T742 122 aa7.09□□□□□ -1.27
RFFL-212ENST00000584655 MIFP14174 115 aa7.09□□□□□ -1.28
RFFL-212ENST00000584655 SMIM20Q8N5G0 67 aa7.09□□□□□ -1.28
RFFL-212ENST00000584655 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.08□□□□□ -1.28
RFFL-212ENST00000584655 ESRGQ1W209 222 aa7.08□□□□□ -1.28
RFFL-212ENST00000584655 SOSTDC1Q6X4U4 206 aa7.08□□□□□ -1.28
RFFL-212ENST00000584655 UBE2DNLQ8IWF7 75 aa7.08□□□□□ -1.28
RFFL-212ENST00000584655 K7EIL1 84 aa7.08□□□□□ -1.28
RFFL-212ENST00000584655 COX7A2LO14548 114 aa7.08□□□□□ -1.28
RFFL-212ENST00000584655 CDIP1Q9H305 208 aa7.08□□□□□ -1.28
RFFL-212ENST00000584655 TRIAP1O43715 76 aa7.07□□□□□ -1.28
RFFL-212ENST00000584655 WFDC9Q8NEX5 89 aa7.07□□□□□ -1.28
RFFL-212ENST00000584655 SND1-IT1Q9HBX3 110 aa7.07□□□□□ -1.28
RFFL-212ENST00000584655 PRO0461Q9UI25 63 aa7.07□□□□□ -1.28
RFFL-212ENST00000584655 SRRM2Q9UQ35 2752 aaKnown RBP7.07□□□□□ -1.28
RFFL-212ENST00000584655 SPATA25Q9BR10 227 aa7.07□□□□□ -1.28
RFFL-212ENST00000584655 PYGO1Q9Y3Y4 419 aa7.07□□□□□ -1.28
RFFL-212ENST00000584655 LYRM9A8MSI8 78 aa7.07□□□□□ -1.28
RFFL-212ENST00000584655 SPAG11BQ08648 103 aa7.06□□□□□ -1.28
RFFL-212ENST00000584655 IL17DQ8TAD2 202 aa7.06□□□□□ -1.28
RFFL-212ENST00000584655 LINC00308Q8TCZ7 52 aa7.06□□□□□ -1.28
RFFL-212ENST00000584655 ZNF561-AS1K7EIQ3 104 aa7.05□□□□□ -1.28
RFFL-212ENST00000584655 IGKV2-24A0A0C4DH68 120 aa7.05□□□□□ -1.28
RFFL-212ENST00000584655 LYPD5Q6UWN5 251 aa7.05□□□□□ -1.28
RFFL-212ENST00000584655 KIR2DL5BQ8NHK3 375 aa7.05□□□□□ -1.28
RFFL-212ENST00000584655 CCDC179H3BU77 68 aa7.04□□□□□ -1.28
RFFL-212ENST00000584655 GAGE2AQ6NT46 116 aa7.04□□□□□ -1.28
RFFL-212ENST00000584655 RPL18AQ02543 176 aaKnown RBP7.04□□□□□ -1.28
RFFL-212ENST00000584655 IFITM1P13164 125 aa7.04□□□□□ -1.28
RFFL-212ENST00000584655 CASC10Q5T4H9 136 aa7.04□□□□□ -1.28
RFFL-212ENST00000584655 SMIM9A6NGZ8 99 aa7.03□□□□□ -1.28
RFFL-212ENST00000584655 MIAQ16674 131 aa7.03□□□□□ -1.28
RFFL-212ENST00000584655 CAMK2N2Q96S95 79 aa7.03□□□□□ -1.28
RFFL-212ENST00000584655 IGHV3OR16-9A0A0B4J2B5 98 aa7.03□□□□□ -1.28
RFFL-212ENST00000584655 PSCAO43653 123 aa7.03□□□□□ -1.28
RFFL-212ENST00000584655 DNAL4O96015 105 aa7.03□□□□□ -1.28
RFFL-212ENST00000584655 S100A7L2Q5SY68 101 aa7.03□□□□□ -1.28
RFFL-212ENST00000584655 C1orf43Q9BWL3 253 aa7.03□□□□□ -1.28
RFFL-212ENST00000584655 SCGB1A1P11684 91 aa7.02□□□□□ -1.29
RFFL-212ENST00000584655 CCL18P55774 89 aa7.01□□□□□ -1.29
RFFL-212ENST00000584655 IGKV2-28A0A075B6P5 120 aa7□□□□□ -1.29
RFFL-212ENST00000584655 FAM236AA0A1B0GUQ0 79 aa7□□□□□ -1.29
RFFL-212ENST00000584655 FAM236BA0A1B0GV22 79 aa7□□□□□ -1.29
RFFL-212ENST00000584655 IGKV2D-28P01615 120 aa7□□□□□ -1.29
RFFL-212ENST00000584655 NDUFV3P56181 108 aaKnown RBP7□□□□□ -1.29
RFFL-212ENST00000584655 MEGF8Q7Z7M0 2845 aa7□□□□□ -1.29
RFFL-212ENST00000584655 DNHD1Q96M86 4753 aa7□□□□□ -1.29
RFFL-212ENST00000584655 TIRAPP58753 221 aa6.99□□□□□ -1.29
RFFL-212ENST00000584655 NDUFA1O15239 70 aa6.99□□□□□ -1.29
RFFL-212ENST00000584655 ENHOQ6UWT2 76 aa6.99□□□□□ -1.29
RFFL-212ENST00000584655 LITAFQ99732 161 aa6.99□□□□□ -1.29
RFFL-212ENST00000584655 LINC00337Q8N6G1 96 aa6.99□□□□□ -1.29
RFFL-212ENST00000584655 DEFB105AQ8NG35 78 aa6.99□□□□□ -1.29
RFFL-212ENST00000584655 COPS9Q8WXC6 57 aa6.99□□□□□ -1.29
RFFL-212ENST00000584655 LYSTQ99698 3801 aa6.98□□□□□ -1.29
RFFL-212ENST00000584655 RPL37AP8A6NKH3 93 aa6.98□□□□□ -1.29
RFFL-212ENST00000584655 IGKV3D-7A0A0C4DH55 119 aa6.98□□□□□ -1.29
RFFL-212ENST00000584655 TRBV10-2A0A0K0K1G8 114 aa6.98□□□□□ -1.29
RFFL-212ENST00000584655 LELP1Q5T871 98 aa6.98□□□□□ -1.29
RFFL-212ENST00000584655 HIST1H4AP62805 103 aaKnown RBP6.97□□□□□ -1.29
RFFL-212ENST00000584655 HERV-K104P63124 156 aa6.97□□□□□ -1.29
RFFL-212ENST00000584655 FBN3Q75N90 2809 aa6.97□□□□□ -1.29
RFFL-212ENST00000584655 A0A087WZ39 114 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms