RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 RBMY1A1P0DJD3 496 aaKnown RBP6.94□□□□□ -1.3
MKS1-212ENST00000583577 RBMY1CP0DJD4 496 aa6.94□□□□□ -1.3
MKS1-212ENST00000583577 Q8N1X5 172 aa6.94□□□□□ -1.3
MKS1-212ENST00000583577 CSNK1G2-AS1Q8NCQ2 148 aa6.94□□□□□ -1.3
MKS1-212ENST00000583577 UBE2WQ96B02 151 aa6.94□□□□□ -1.3
MKS1-212ENST00000583577 OPRPNQ99935 248 aaPredicted RBP6.94□□□□□ -1.3
MKS1-212ENST00000583577 VPS13BQ7Z7G8 4022 aa6.93□□□□□ -1.3
MKS1-212ENST00000583577 IGHV3OR16-12A0A075B7B8 117 aa6.93□□□□□ -1.3
MKS1-212ENST00000583577 LST1O00453 97 aa6.93□□□□□ -1.3
MKS1-212ENST00000583577 RTL8CO15255 209 aa6.93□□□□□ -1.3
MKS1-212ENST00000583577 TRIAP1O43715 76 aa6.93□□□□□ -1.3
MKS1-212ENST00000583577 SNCGO76070 127 aa6.93□□□□□ -1.3
MKS1-212ENST00000583577 PRSS2P07478 247 aa6.93□□□□□ -1.3
MKS1-212ENST00000583577 MIFP14174 115 aa6.93□□□□□ -1.3
MKS1-212ENST00000583577 TRAV8-4A0A0B4J246 113 aa6.92□□□□□ -1.3
MKS1-212ENST00000583577 XGP55808 180 aa6.92□□□□□ -1.3
MKS1-212ENST00000583577 FAM222AQ5U5X8 452 aa6.92□□□□□ -1.3
MKS1-212ENST00000583577 C2orf82Q6UX34 121 aa6.92□□□□□ -1.3
MKS1-212ENST00000583577 FAT1Q14517 4588 aa6.91□□□□□ -1.3
MKS1-212ENST00000583577 TRAV26-1A0A087WT03 109 aa6.91□□□□□ -1.3
MKS1-212ENST00000583577 SMIM9A6NGZ8 99 aa6.91□□□□□ -1.3
MKS1-212ENST00000583577 EIF4EBP3O60516 100 aaPredicted RBP6.91□□□□□ -1.3
MKS1-212ENST00000583577 CDK2AP2O75956 126 aa6.91□□□□□ -1.3
MKS1-212ENST00000583577 GAGE2BQ13066 116 aa6.91□□□□□ -1.3
MKS1-212ENST00000583577 GAGE2EQ4V326 116 aa6.91□□□□□ -1.3
MKS1-212ENST00000583577 NTN5Q8WTR8 489 aaPredicted RBP6.91□□□□□ -1.3
MKS1-212ENST00000583577 IMUPQ9GZP8 106 aa6.91□□□□□ -1.3
MKS1-212ENST00000583577 C11orf68Q9H3H3 251 aaKnown RBP6.91□□□□□ -1.3
MKS1-212ENST00000583577 GAGE2DQ9UEU5 116 aa6.91□□□□□ -1.3
MKS1-212ENST00000583577 X6R8D5 127 aa6.91□□□□□ -1.3
MKS1-212ENST00000583577 HMCN2Q8NDA2 5059 aa6.91□□□□□ -1.3
MKS1-212ENST00000583577 IGHV4-28A0A0C4DH34 117 aa6.9□□□□□ -1.3
MKS1-212ENST00000583577 K7EQD1 137 aa6.9□□□□□ -1.3
MKS1-212ENST00000583577 TRACP01848 142 aa6.9□□□□□ -1.3
MKS1-212ENST00000583577 C1orf158Q8N1D5 194 aa6.9□□□□□ -1.3
MKS1-212ENST00000583577 Q8NAQ8 132 aa6.9□□□□□ -1.3
MKS1-212ENST00000583577 C16orf74Q96GX8 76 aa6.9□□□□□ -1.3
MKS1-212ENST00000583577 TMEM101Q96IK0 257 aa6.9□□□□□ -1.3
MKS1-212ENST00000583577 IGHV3-64A0A075B6Q5 118 aa6.89□□□□□ -1.31
MKS1-212ENST00000583577 TRAV8-3A0A0A6YYJ7 113 aa6.89□□□□□ -1.31
MKS1-212ENST00000583577 TRBV6-4A0A1B0GX49 114 aa6.89□□□□□ -1.31
MKS1-212ENST00000583577 M0R2N4 97 aa6.89□□□□□ -1.31
MKS1-212ENST00000583577 COX7A2LO14548 114 aa6.89□□□□□ -1.31
MKS1-212ENST00000583577 DEFB4AO15263 64 aa6.89□□□□□ -1.31
MKS1-212ENST00000583577 MT-ATP8P03928 68 aa6.89□□□□□ -1.31
MKS1-212ENST00000583577 LINC00242Q5T6M2 205 aa6.89□□□□□ -1.31
MKS1-212ENST00000583577 LINC00308Q8TCZ7 52 aa6.89□□□□□ -1.31
MKS1-212ENST00000583577 CDKN2A-AS1Q9UH64 79 aa6.89□□□□□ -1.31
MKS1-212ENST00000583577 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.88□□□□□ -1.31
MKS1-212ENST00000583577 TRAV13-2A0A0B4J235 113 aa6.88□□□□□ -1.31
MKS1-212ENST00000583577 IGKV2-29A2NJV5 120 aaPredicted RBP6.88□□□□□ -1.31
MKS1-212ENST00000583577 C16orf90A8MZG2 172 aa6.88□□□□□ -1.31
MKS1-212ENST00000583577 HTN1P15515 57 aa6.88□□□□□ -1.31
MKS1-212ENST00000583577 ADAMTSL4-AS1Q5T5F5 129 aa6.88□□□□□ -1.31
MKS1-212ENST00000583577 ANAPC13Q9BS18 74 aa6.88□□□□□ -1.31
MKS1-212ENST00000583577 NACAE9PAV3 2078 aa6.88□□□□□ -1.31
MKS1-212ENST00000583577 IGHV3-73A0A0B4J1V6 119 aa6.87□□□□□ -1.31
MKS1-212ENST00000583577 SMIM1B2RUZ4 78 aa6.87□□□□□ -1.31
MKS1-212ENST00000583577 H7C2G1 150 aa6.87□□□□□ -1.31
MKS1-212ENST00000583577 C11orf45Q8TAV5 145 aa6.87□□□□□ -1.31
MKS1-212ENST00000583577 ZNF625Q96I27 306 aaPredicted RBP6.87□□□□□ -1.31
MKS1-212ENST00000583577 TMEM243Q9BU79 118 aa6.87□□□□□ -1.31
MKS1-212ENST00000583577 CDC42SE2Q9NRR3 84 aa6.87□□□□□ -1.31
MKS1-212ENST00000583577 UBE2L6O14933 153 aa6.86□□□□□ -1.31
MKS1-212ENST00000583577 INAFM2P0DMQ5 153 aa6.86□□□□□ -1.31
MKS1-212ENST00000583577 NANOS2P60321 138 aaKnown RBP6.86□□□□□ -1.31
MKS1-212ENST00000583577 TTC32Q5I0X7 151 aa6.86□□□□□ -1.31
MKS1-212ENST00000583577 Q6ZSN1 163 aa6.86□□□□□ -1.31
MKS1-212ENST00000583577 LINC01561Q8N1V8 128 aa6.86□□□□□ -1.31
MKS1-212ENST00000583577 Q9H8V8 135 aa6.86□□□□□ -1.31
MKS1-212ENST00000583577 TRGV1A0A0A0MS02 117 aa6.85□□□□□ -1.31
MKS1-212ENST00000583577 TRBV7-7A0A0K0K1E9 115 aa6.85□□□□□ -1.31
MKS1-212ENST00000583577 ATP5G1P05496 136 aa6.85□□□□□ -1.31
MKS1-212ENST00000583577 SPART-AS1P0CW21 52 aa6.85□□□□□ -1.31
MKS1-212ENST00000583577 GAGE5Q13069 117 aa6.85□□□□□ -1.31
MKS1-212ENST00000583577 GAGE6Q13070 117 aa6.85□□□□□ -1.31
MKS1-212ENST00000583577 MEIG1Q5JSS6 88 aa6.85□□□□□ -1.31
MKS1-212ENST00000583577 APLNQ9ULZ1 77 aa6.85□□□□□ -1.31
MKS1-212ENST00000583577 H0YGX0 51 aa6.84□□□□□ -1.31
MKS1-212ENST00000583577 PRM2P04554 102 aa6.84□□□□□ -1.31
MKS1-212ENST00000583577 RPL28P46779 137 aaKnown RBP6.84□□□□□ -1.31
MKS1-212ENST00000583577 DAND5Q8N907 189 aa6.84□□□□□ -1.31
MKS1-212ENST00000583577 DEFB104AQ8WTQ1 72 aa6.84□□□□□ -1.31
MKS1-212ENST00000583577 CELA1Q9UNI1 258 aa6.84□□□□□ -1.31
MKS1-212ENST00000583577 TEX49A0A1B0GTD5 131 aa6.83□□□□□ -1.32
MKS1-212ENST00000583577 LYRM9A8MSI8 78 aa6.83□□□□□ -1.32
MKS1-212ENST00000583577 F5H768 121 aa6.83□□□□□ -1.32
MKS1-212ENST00000583577 NDUFV3P56181 108 aaKnown RBP6.83□□□□□ -1.32
MKS1-212ENST00000583577 IBA57-AS1B1ANH7 110 aa6.82□□□□□ -1.32
MKS1-212ENST00000583577 CXCL5P42830 114 aa6.82□□□□□ -1.32
MKS1-212ENST00000583577 DAD1P61803 113 aa6.82□□□□□ -1.32
MKS1-212ENST00000583577 C15orf53Q8NAA6 179 aa6.82□□□□□ -1.32
MKS1-212ENST00000583577 TRAV10A0A0B4J240 114 aa6.81□□□□□ -1.32
MKS1-212ENST00000583577 IGHV3-38A0A0C4DH36 116 aa6.81□□□□□ -1.32
MKS1-212ENST00000583577 A0A1B0GX51 115 aa6.81□□□□□ -1.32
MKS1-212ENST00000583577 GAGE12JA6NER3 117 aa6.81□□□□□ -1.32
MKS1-212ENST00000583577 EPM2AB3EWF7 344 aa6.81□□□□□ -1.32
MKS1-212ENST00000583577 GAGE7O76087 117 aa6.81□□□□□ -1.32
MKS1-212ENST00000583577 CRPP02741 224 aa6.81□□□□□ -1.32
MKS1-212ENST00000583577 GAGE12FP0CL80 117 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms