RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 IGKV3D-7A0A0C4DH55 119 aa4.06□□□□□ -1.76
RTTN-209ENST00000583043 MP68P56378 58 aa4.06□□□□□ -1.76
RTTN-209ENST00000583043 ZNF706Q9Y5V0 76 aaPredicted RBP4.05□□□□□ -1.76
RTTN-209ENST00000583043 CHD7Q9P2D1 2997 aa4.05□□□□□ -1.76
RTTN-209ENST00000583043 PLAC8L1A1L4L8 177 aa4.05□□□□□ -1.76
RTTN-209ENST00000583043 DEFB4AO15263 64 aa4.05□□□□□ -1.76
RTTN-209ENST00000583043 PRM2P04554 102 aa4.05□□□□□ -1.76
RTTN-209ENST00000583043 HTTP42858 3142 aa4.05□□□□□ -1.76
RTTN-209ENST00000583043 TRAV7A0A075B6U4 112 aa4.05□□□□□ -1.76
RTTN-209ENST00000583043 Q8NAQ8 132 aa4.05□□□□□ -1.76
RTTN-209ENST00000583043 UNQ6190/PRO20217Q6UXQ8 127 aa4.04□□□□□ -1.76
RTTN-209ENST00000583043 PRR34Q9NV39 138 aa4.04□□□□□ -1.76
RTTN-209ENST00000583043 NACAE9PAV3 2078 aa4.04□□□□□ -1.76
RTTN-209ENST00000583043 SOSTDC1Q6X4U4 206 aa4.04□□□□□ -1.76
RTTN-209ENST00000583043 GIG44P09565 113 aaPredicted RBP4.04□□□□□ -1.76
RTTN-209ENST00000583043 SS18L2Q9UHA2 77 aa4.03□□□□□ -1.76
RTTN-209ENST00000583043 A0A087WYN8 130 aa4.03□□□□□ -1.76
RTTN-209ENST00000583043 NHLRC4P0CG21 123 aaPredicted RBP4.03□□□□□ -1.76
RTTN-209ENST00000583043 C6orf223Q8N319 242 aa4.03□□□□□ -1.76
RTTN-209ENST00000583043 NUPR2A6NF83 97 aa4.03□□□□□ -1.76
RTTN-209ENST00000583043 SPATA3Q8NHX4 192 aa4.03□□□□□ -1.76
RTTN-209ENST00000583043 LINC00167Q96N53 147 aa4.03□□□□□ -1.77
RTTN-209ENST00000583043 DOPEY2Q9Y3R5 2298 aa4.02□□□□□ -1.77
RTTN-209ENST00000583043 AGRNO00468 2067 aa4.02□□□□□ -1.77
RTTN-209ENST00000583043 UBE2AP49459 152 aa4.02□□□□□ -1.77
RTTN-209ENST00000583043 CRYGAP11844 174 aa4.01□□□□□ -1.77
RTTN-209ENST00000583043 ELOF1P60002 83 aaKnown RBP4.01□□□□□ -1.77
RTTN-209ENST00000583043 IGLV6-57P01721 117 aa4.01□□□□□ -1.77
RTTN-209ENST00000583043 KRTAP1-1Q07627 177 aa4.01□□□□□ -1.77
RTTN-209ENST00000583043 XAGE1AQ9HD64 81 aa4.01□□□□□ -1.77
RTTN-209ENST00000583043 PLA2G2DQ9UNK4 145 aa4.01□□□□□ -1.77
RTTN-209ENST00000583043 LAMA3Q16787 3333 aa4.01□□□□□ -1.77
RTTN-209ENST00000583043 LAMA2P24043 3122 aaKnown RBP4.01□□□□□ -1.77
RTTN-209ENST00000583043 IGKV2-28A0A075B6P5 120 aa4.01□□□□□ -1.77
RTTN-209ENST00000583043 FAM236DA0A1B0GTK5 79 aa4.01□□□□□ -1.77
RTTN-209ENST00000583043 IGKV2D-28P01615 120 aa4.01□□□□□ -1.77
RTTN-209ENST00000583043 SLPIP03973 132 aa4.01□□□□□ -1.77
RTTN-209ENST00000583043 FAM236CP0DP71 79 aa4.01□□□□□ -1.77
RTTN-209ENST00000583043 ENHOQ6UWT2 76 aa4.01□□□□□ -1.77
RTTN-209ENST00000583043 LRCOL1A6NCL2 159 aa4□□□□□ -1.77
RTTN-209ENST00000583043 RPS28P62857 69 aaKnown RBP4□□□□□ -1.77
RTTN-209ENST00000583043 DNAH10OSP0CZ25 163 aa4□□□□□ -1.77
RTTN-209ENST00000583043 PKD1L2Q7Z442 2459 aa4□□□□□ -1.77
RTTN-209ENST00000583043 KIAA0087Q14695 138 aa4□□□□□ -1.77
RTTN-209ENST00000583043 TLX1NBP0CAT3 122 aa4□□□□□ -1.77
RTTN-209ENST00000583043 Q6ZTC4 211 aa4□□□□□ -1.77
RTTN-209ENST00000583043 WDR87Q6ZQQ6 2873 aa4□□□□□ -1.77
RTTN-209ENST00000583043 DEFB105AQ8NG35 78 aa3.99□□□□□ -1.77
RTTN-209ENST00000583043 V9GYY9 64 aa3.99□□□□□ -1.77
RTTN-209ENST00000583043 ERC2-IT1O76042 136 aa3.99□□□□□ -1.77
RTTN-209ENST00000583043 OBSCN-AS1Q96MR7 158 aa3.99□□□□□ -1.77
RTTN-209ENST00000583043 REG3GQ6UW15 175 aa3.98□□□□□ -1.77
RTTN-209ENST00000583043 FAM104AQ969W3 186 aa3.98□□□□□ -1.77
RTTN-209ENST00000583043 LINC00846Q9NV44 126 aa3.98□□□□□ -1.77
RTTN-209ENST00000583043 C6orf48Q9UBA6 75 aa3.98□□□□□ -1.77
RTTN-209ENST00000583043 MYO9AB2RTY4 2548 aa3.98□□□□□ -1.77
RTTN-209ENST00000583043 FAM229AH3BQW9 127 aa3.98□□□□□ -1.77
RTTN-209ENST00000583043 FAM19A1Q7Z5A9 133 aa3.98□□□□□ -1.77
RTTN-209ENST00000583043 Q9UF83 564 aa3.98□□□□□ -1.77
RTTN-209ENST00000583043 CELA1Q9UNI1 258 aa3.98□□□□□ -1.77
RTTN-209ENST00000583043 USP9XQ93008 2570 aaPredicted RBP3.98□□□□□ -1.77
RTTN-209ENST00000583043 NANOS2P60321 138 aaKnown RBP3.97□□□□□ -1.77
RTTN-209ENST00000583043 Q6ZQT0 140 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 Q6ZVQ6 151 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 CCDC179H3BU77 68 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 Q6ZRU5 148 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 MRPL55Q7Z7F7 128 aaKnown RBP3.97□□□□□ -1.77
RTTN-209ENST00000583043 FAM218AQ96MZ4 157 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 OXLD1Q5BKU9 147 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 WFDC10BQ8IUB3 73 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 PTPN13Q12923 2485 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 C20orf197Q8N268 126 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 SERP1Q9Y6X1 66 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 ZNF462Q96JM2 2506 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 A0A0U1RQV1 116 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 M0R2N4 97 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 VPREB1P12018 145 aa3.97□□□□□ -1.77
RTTN-209ENST00000583043 C1orf137Q5JT78 98 aa3.96□□□□□ -1.77
RTTN-209ENST00000583043 USP9YO00507 2555 aaPredicted RBP3.96□□□□□ -1.78
RTTN-209ENST00000583043 NOTCH3Q9UM47 2321 aa3.96□□□□□ -1.78
RTTN-209ENST00000583043 SMR3AQ99954 134 aa3.96□□□□□ -1.78
RTTN-209ENST00000583043 KCNQ1DNQ9H478 68 aa3.96□□□□□ -1.78
RTTN-209ENST00000583043 MYO18BQ8IUG5 2567 aa3.96□□□□□ -1.78
RTTN-209ENST00000583043 H3BPC8 53 aa3.96□□□□□ -1.78
RTTN-209ENST00000583043 LINC01547P58512 204 aaPredicted RBP3.96□□□□□ -1.78
RTTN-209ENST00000583043 MUC4Q99102 2169 aa3.96□□□□□ -1.78
RTTN-209ENST00000583043 ESRGQ1W209 222 aa3.96□□□□□ -1.78
RTTN-209ENST00000583043 C9orf116Q5BN46 136 aaPredicted RBP3.96□□□□□ -1.78
RTTN-209ENST00000583043 C7orf33Q8WU49 177 aa3.96□□□□□ -1.78
RTTN-209ENST00000583043 IGLV5-37A0A075B6J1 123 aa3.95□□□□□ -1.78
RTTN-209ENST00000583043 C5orf47Q569G3 176 aa3.95□□□□□ -1.78
RTTN-209ENST00000583043 FAM19A5Q7Z5A7 132 aaPredicted RBP3.95□□□□□ -1.78
RTTN-209ENST00000583043 SMIM26A0A096LP01 95 aa3.95□□□□□ -1.78
RTTN-209ENST00000583043 EIF4EBP3O60516 100 aaPredicted RBP3.94□□□□□ -1.78
RTTN-209ENST00000583043 RPL37AP61513 92 aaKnown RBP3.94□□□□□ -1.78
RTTN-209ENST00000583043 Q6ZRX8 168 aa3.94□□□□□ -1.78
RTTN-209ENST00000583043 CCDC168Q8NDH2 2452 aa3.94□□□□□ -1.78
RTTN-209ENST00000583043 WNK1Q9H4A3 2382 aa3.94□□□□□ -1.78
RTTN-209ENST00000583043 HIGD2AQ9BW72 106 aa3.94□□□□□ -1.78
RTTN-209ENST00000583043 C10orf25Q5T742 122 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms