RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 R4GMQ9 66 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 HSPG2P98160 4391 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 PLCE1Q9P212 2302 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 DNAH17Q9UFH2 4485 aa0.94□□□□□ -2.26
SMCHD1-205ENST00000581383 DNAH6Q9C0G6 4158 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 TENM2Q9NT68 2774 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 FAT1Q14517 4588 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 LCE6AA0A183 80 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 ZNF670-ZNF695F2Z2N8 137 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 J3QLW9 94 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 GNGT2O14610 69 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 PPYP01298 95 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 IGLV3-1P01715 115 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 PRH1P02810 166 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 TPT1P13693 172 aaKnown RBP0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 GTF2A1P52655 376 aaPredicted RBP0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 CAV3P56539 151 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 MIR22HGQ0VDD5 57 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 INSL4Q14641 139 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 RPL39P5Q59GN2 51 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 Q5XG85 94 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 OR5AK2Q8NH90 309 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 MAFIPQ8WZ33 124 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 CST11Q9H112 138 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 BANF2Q9H503 90 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 NOP16Q9Y3C1 178 aaKnown RBP0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 MPC1Q9Y5U8 109 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 V9GYS6 101 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 TANC2Q9HCD6 1990 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 COL7A1Q02388 2944 aa0.93□□□□□ -2.26
SMCHD1-205ENST00000581383 FRAS1Q86XX4 4008 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 STAB2Q8WWQ8 2551 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 MUC4Q99102 2169 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 C3orf85A0A1B0GTC6 90 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 LOC105371267A0A1B0GV96 52 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 A0A1B0GW64 132 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 A0A1B0GX51 115 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 TMEM30CPA0ZSE6 113 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 DEGS1O15121 323 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 DEFB4AO15263 64 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 NDUFA2O43678 99 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 LY6G6CO95867 125 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 TRACP01848 142 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 SAA2P0DJI9 122 aaPredicted RBP0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 SMIM11AP58511 58 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 TPPP2P59282 170 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 RPS28P62857 69 aaKnown RBP0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 MINOS1Q5TGZ0 78 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 C12orf73Q69YU5 71 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 RPL13AP3Q6NVV1 102 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 IDO2Q6ZQW0 420 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 OR8I2Q8N0Y5 310 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 WFDC9Q8NEX5 89 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 ARL11Q969Q4 196 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 NABP2Q9BQ15 211 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 LIMD2Q9BT23 127 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 JPT1Q9UK76 154 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 LINC00312Q9Y6C7 94 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 PKHD1P08F94 4074 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 RNF213Q63HN8 5207 aa0.92□□□□□ -2.26
SMCHD1-205ENST00000581383 LOC107984156A0A0G2JMH3 177 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 TCRBV3S1A0A5B6 114 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 ARPC5O15511 151 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 DPM2O94777 84 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 CYB5AP00167 134 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 APOC1P02654 83 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 MT-ND4LP03901 98 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 HMGN1P05114 100 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 SAA1P0DJI8 122 aaPredicted RBP0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 PRB4P10163 310 aaPredicted RBP0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 SLC25A4P12235 298 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 RBP2P50120 134 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 PPP3R1P63098 170 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 PLGLAQ15195 96 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 DEFB135Q30KP9 77 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 UNQ5815/PRO19632Q6UWF5 114 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 GLIPR1L1Q6UWM5 242 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 HEPN1Q6WQI6 88 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 CASC2Q6XLA1 102 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 C6orf201Q7Z4U5 140 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 ARL17AQ8IVW1 177 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 OR5A2Q8NGI9 324 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 OR10AG1Q8NH19 301 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 MYOZ3Q8TDC0 251 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 DYNLRB2Q8TF09 96 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 BATF3Q9NR55 127 aa0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 METTL1Q9UBP6 276 aaKnown RBP0.91□□□□□ -2.26
SMCHD1-205ENST00000581383 KMT2AQ03164 3969 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 A0A1W2PPM0 123 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 JMJD7-PLA2G4BH0Y9G9 81 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 HBDP02042 147 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 RBP4P02753 201 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 TCRAP04437 139 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 SCTP09683 121 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 SCGB1A1P11684 91 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 RPS25P62851 125 aaKnown RBP0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 HAMPP81172 84 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 HMGN3Q15651 99 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 NEDD8Q15843 81 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 247.9 ms