RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 M0R143 59 aa4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 LY6G6CO95867 125 aa4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 SLPIP03973 132 aa4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 PRSS2P07478 247 aa4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 FUSP35637 526 aaKnown RBP eCLIP4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 C6orf226Q5I0X4 101 aa4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 MEIG1Q5JSS6 88 aa4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 CFAP161Q6P656 301 aa4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 MUSTN1Q8IVN3 82 aa4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 Q8IZM0 81 aa4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 LINC01561Q8N1V8 128 aa4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 HIST1H4GQ99525 98 aa4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 NAA38Q9BRA0 125 aaKnown RBP4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 COL7A1Q02388 2944 aa4.05□□□□□ -1.76
RNU4ATAC-201ENST00000580972 PFN2P35080 140 aa4.04□□□□□ -1.76
RNU4ATAC-201ENST00000580972 Q6ZRN7 208 aaPredicted RBP4.04□□□□□ -1.76
RNU4ATAC-201ENST00000580972 Q6ZRU5 148 aa4.04□□□□□ -1.76
RNU4ATAC-201ENST00000580972 CEND1Q8N111 149 aa4.04□□□□□ -1.76
RNU4ATAC-201ENST00000580972 MIR7-3HGQ8N6C7 128 aa4.04□□□□□ -1.76
RNU4ATAC-201ENST00000580972 Q8NDZ9 215 aa4.04□□□□□ -1.76
RNU4ATAC-201ENST00000580972 NTN5Q8WTR8 489 aaPredicted RBP4.04□□□□□ -1.76
RNU4ATAC-201ENST00000580972 LINC00476Q8WZB0 136 aa4.04□□□□□ -1.76
RNU4ATAC-201ENST00000580972 C6orf48Q9UBA6 75 aa4.04□□□□□ -1.76
RNU4ATAC-201ENST00000580972 GVQW2A0A096LPI5 108 aaPredicted RBP4.03□□□□□ -1.76
RNU4ATAC-201ENST00000580972 LINC00158P58513 81 aa4.03□□□□□ -1.76
RNU4ATAC-201ENST00000580972 CKS1BP61024 79 aa4.03□□□□□ -1.76
RNU4ATAC-201ENST00000580972 SRSF9Q13242 221 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNU4ATAC-201ENST00000580972 Q6ZR54 194 aa4.03□□□□□ -1.76
RNU4ATAC-201ENST00000580972 SPANXDQ9BXN6 97 aa4.03□□□□□ -1.76
RNU4ATAC-201ENST00000580972 SPANXB1Q9NS25 103 aaPredicted RBP4.03□□□□□ -1.76
RNU4ATAC-201ENST00000580972 SPANXCQ9NY87 97 aa4.03□□□□□ -1.76
RNU4ATAC-201ENST00000580972 ERG28Q9UKR5 140 aa4.03□□□□□ -1.76
RNU4ATAC-201ENST00000580972 ALMS1Q8TCU4 4167 aa4.02□□□□□ -1.77
RNU4ATAC-201ENST00000580972 VPS13DQ5THJ4 4388 aa4.02□□□□□ -1.77
RNU4ATAC-201ENST00000580972 A4D1N5 150 aa4.02□□□□□ -1.77
RNU4ATAC-201ENST00000580972 TMEM238C9JI98 176 aa4.02□□□□□ -1.77
RNU4ATAC-201ENST00000580972 TIMM17BO60830 172 aa4.02□□□□□ -1.77
RNU4ATAC-201ENST00000580972 APOMO95445 188 aa4.02□□□□□ -1.77
RNU4ATAC-201ENST00000580972 HERV-K104P63124 156 aa4.02□□□□□ -1.77
RNU4ATAC-201ENST00000580972 LINC00308Q8TCZ7 52 aa4.02□□□□□ -1.77
RNU4ATAC-201ENST00000580972 RMI2Q96E14 147 aa4.02□□□□□ -1.77
RNU4ATAC-201ENST00000580972 CAMK2N2Q96S95 79 aa4.02□□□□□ -1.77
RNU4ATAC-201ENST00000580972 TM2D2Q9BX73 214 aa4.02□□□□□ -1.77
RNU4ATAC-201ENST00000580972 NHP2Q9NX24 153 aaKnown RBP4.02□□□□□ -1.77
RNU4ATAC-201ENST00000580972 CSMD3Q7Z407 3707 aa4.01□□□□□ -1.77
RNU4ATAC-201ENST00000580972 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.01□□□□□ -1.77
RNU4ATAC-201ENST00000580972 A0A1B0GV90 55 aa4.01□□□□□ -1.77
RNU4ATAC-201ENST00000580972 LRCOL1A6NCL2 159 aa4.01□□□□□ -1.77
RNU4ATAC-201ENST00000580972 C3orf84H3BNL1 204 aa4.01□□□□□ -1.77
RNU4ATAC-201ENST00000580972 ZNF561-AS1K7EIQ3 104 aa4.01□□□□□ -1.77
RNU4ATAC-201ENST00000580972 TAX1BP3O14907 124 aa4.01□□□□□ -1.77
RNU4ATAC-201ENST00000580972 PTTG1IPP53801 180 aa4.01□□□□□ -1.77
RNU4ATAC-201ENST00000580972 TAL2Q16559 108 aa4.01□□□□□ -1.77
RNU4ATAC-201ENST00000580972 LINC01620Q4KN68 170 aa4.01□□□□□ -1.77
RNU4ATAC-201ENST00000580972 TTC32Q5I0X7 151 aa4.01□□□□□ -1.77
RNU4ATAC-201ENST00000580972 RAB37Q96AX2 223 aa4.01□□□□□ -1.77
RNU4ATAC-201ENST00000580972 PSCAO43653 123 aa4□□□□□ -1.77
RNU4ATAC-201ENST00000580972 CFC1BP0CG36 223 aa4□□□□□ -1.77
RNU4ATAC-201ENST00000580972 CFC1P0CG37 223 aa4□□□□□ -1.77
RNU4ATAC-201ENST00000580972 CXCL5P42830 114 aa4□□□□□ -1.77
RNU4ATAC-201ENST00000580972 PRR3P79522 188 aaKnown RBP4□□□□□ -1.77
RNU4ATAC-201ENST00000580972 SYCNQ0VAF6 134 aa4□□□□□ -1.77
RNU4ATAC-201ENST00000580972 C2orf48Q96LS8 159 aa4□□□□□ -1.77
RNU4ATAC-201ENST00000580972 SND1-IT1Q9HBX3 110 aa4□□□□□ -1.77
RNU4ATAC-201ENST00000580972 XAGE1AQ9HD64 81 aa4□□□□□ -1.77
RNU4ATAC-201ENST00000580972 LYSTQ99698 3801 aa3.99□□□□□ -1.77
RNU4ATAC-201ENST00000580972 A0A1B0GWB2 263 aa3.99□□□□□ -1.77
RNU4ATAC-201ENST00000580972 H7C2G1 150 aa3.99□□□□□ -1.77
RNU4ATAC-201ENST00000580972 GAGE2EQ4V326 116 aa3.99□□□□□ -1.77
RNU4ATAC-201ENST00000580972 COL5A1-AS1Q5SY13 56 aa3.99□□□□□ -1.77
RNU4ATAC-201ENST00000580972 SFTA2Q6UW10 78 aa3.99□□□□□ -1.77
RNU4ATAC-201ENST00000580972 CARD19Q96LW7 228 aa3.99□□□□□ -1.77
RNU4ATAC-201ENST00000580972 GAGE2DQ9UEU5 116 aa3.99□□□□□ -1.77
RNU4ATAC-201ENST00000580972 IGKV2-28A0A075B6P5 120 aa3.98□□□□□ -1.77
RNU4ATAC-201ENST00000580972 NCR3O14931 201 aa3.98□□□□□ -1.77
RNU4ATAC-201ENST00000580972 RTL8CO15255 209 aa3.98□□□□□ -1.77
RNU4ATAC-201ENST00000580972 IGKV2D-28P01615 120 aa3.98□□□□□ -1.77
RNU4ATAC-201ENST00000580972 CIRBPQ14011 172 aaKnown RBP3.98□□□□□ -1.77
RNU4ATAC-201ENST00000580972 Q6ZRP5 223 aa3.98□□□□□ -1.77
RNU4ATAC-201ENST00000580972 A0A087WTM6 91 aa3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 TRBV30A0A0K0K1B3 111 aa3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 FAM168BA1KXE4 195 aa3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 A6NDN8 102 aa3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 H3BUT2 72 aa3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 TSPAN13O95857 204 aa3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 IFITM1P13164 125 aa3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 RPL13AP40429 203 aaKnown RBP3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 RPL24P83731 157 aaKnown RBP3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 RPL18AQ02543 176 aaKnown RBP3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 TNP2Q05952 138 aa3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 C9orf129Q5T035 196 aaKnown RBP3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 C1orf134Q5TEV5 83 aa3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 LINC00337Q8N6G1 96 aa3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 PGPEP1Q9NXJ5 209 aa3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 COX11Q9Y6N1 276 aa3.97□□□□□ -1.77
RNU4ATAC-201ENST00000580972 DNAH10Q8IVF4 4471 aa3.96□□□□□ -1.77
RNU4ATAC-201ENST00000580972 A0A0B4J2C4 111 aa3.96□□□□□ -1.78
RNU4ATAC-201ENST00000580972 PANO1I0J062 215 aa3.96□□□□□ -1.78
RNU4ATAC-201ENST00000580972 CHTF8P0CG12 524 aa3.96□□□□□ -1.78
RNU4ATAC-201ENST00000580972 GAGE2BQ13066 116 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms