RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 K7EP13 123 aa4.2□□□□□ -1.74
PTPRM-213ENST00000580949 CCL25O15444 150 aa4.2□□□□□ -1.74
PTPRM-213ENST00000580949 IGHV3-30P01768 117 aa4.2□□□□□ -1.74
PTPRM-213ENST00000580949 IGHV3-33P01772 117 aa4.2□□□□□ -1.74
PTPRM-213ENST00000580949 ANGP03950 147 aaKnown RBP4.2□□□□□ -1.74
PTPRM-213ENST00000580949 IGHV3-30-5P0DP03 117 aa4.2□□□□□ -1.74
PTPRM-213ENST00000580949 LGALS3P17931 250 aaKnown RBP4.2□□□□□ -1.74
PTPRM-213ENST00000580949 XCL1P47992 114 aa4.2□□□□□ -1.74
PTPRM-213ENST00000580949 ENHOQ6UWT2 76 aa4.2□□□□□ -1.74
PTPRM-213ENST00000580949 C5orf38Q86SI9 138 aa4.2□□□□□ -1.74
PTPRM-213ENST00000580949 PRR34Q9NV39 138 aa4.2□□□□□ -1.74
PTPRM-213ENST00000580949 KLK12Q9UKR0 248 aa4.2□□□□□ -1.74
PTPRM-213ENST00000580949 A0A087WZ39 114 aa4.19□□□□□ -1.74
PTPRM-213ENST00000580949 A0A0J9YXY3 114 aa4.19□□□□□ -1.74
PTPRM-213ENST00000580949 IGLL5B9A064 214 aa4.19□□□□□ -1.74
PTPRM-213ENST00000580949 REG3AQ06141 175 aa4.19□□□□□ -1.74
PTPRM-213ENST00000580949 HSD52Q0P140 79 aa4.19□□□□□ -1.74
PTPRM-213ENST00000580949 SS18Q15532 418 aa4.19□□□□□ -1.74
PTPRM-213ENST00000580949 ZFAND6Q6FIF0 208 aa4.19□□□□□ -1.74
PTPRM-213ENST00000580949 CHCHD10Q8WYQ3 142 aaPredicted RBP4.19□□□□□ -1.74
PTPRM-213ENST00000580949 LITAFQ99732 161 aa4.19□□□□□ -1.74
PTPRM-213ENST00000580949 NDUFA12Q9UI09 145 aa4.19□□□□□ -1.74
PTPRM-213ENST00000580949 LINC00588Q9Y4M8 146 aa4.19□□□□□ -1.74
PTPRM-213ENST00000580949 PRKDCP78527 4128 aaKnown RBP4.18□□□□□ -1.74
PTPRM-213ENST00000580949 IGLV10-54A0A075B6I4 117 aa4.18□□□□□ -1.74
PTPRM-213ENST00000580949 FXYD2P54710 66 aa4.18□□□□□ -1.74
PTPRM-213ENST00000580949 ADAMTSL4-AS1Q5T5F5 129 aa4.18□□□□□ -1.74
PTPRM-213ENST00000580949 KRTAP26-1Q6PEX3 210 aa4.18□□□□□ -1.74
PTPRM-213ENST00000580949 CD164L2Q6UWJ8 174 aa4.18□□□□□ -1.74
PTPRM-213ENST00000580949 Q6ZVH6 145 aa4.18□□□□□ -1.74
PTPRM-213ENST00000580949 C15orf53Q8NAA6 179 aa4.18□□□□□ -1.74
PTPRM-213ENST00000580949 ORAOV1Q8WV07 137 aa4.18□□□□□ -1.74
PTPRM-213ENST00000580949 ZNF625Q96I27 306 aaPredicted RBP4.18□□□□□ -1.74
PTPRM-213ENST00000580949 FBN3Q75N90 2809 aa4.17□□□□□ -1.74
PTPRM-213ENST00000580949 A0A1B0GV90 55 aa4.17□□□□□ -1.74
PTPRM-213ENST00000580949 NDUFA1O15239 70 aa4.17□□□□□ -1.74
PTPRM-213ENST00000580949 TAL2Q16559 108 aa4.17□□□□□ -1.74
PTPRM-213ENST00000580949 LBHQ53QV2 105 aaPredicted RBP4.17□□□□□ -1.74
PTPRM-213ENST00000580949 LINC01556Q5JQF7 62 aa4.17□□□□□ -1.74
PTPRM-213ENST00000580949 COL5A1-AS1Q5SY13 56 aa4.17□□□□□ -1.74
PTPRM-213ENST00000580949 SCGB1D4Q6XE38 83 aa4.17□□□□□ -1.74
PTPRM-213ENST00000580949 CEND1Q8N111 149 aa4.17□□□□□ -1.74
PTPRM-213ENST00000580949 COX7B2Q8TF08 81 aa4.17□□□□□ -1.74
PTPRM-213ENST00000580949 UBE2WQ96B02 151 aa4.17□□□□□ -1.74
PTPRM-213ENST00000580949 HIST1H4GQ99525 98 aa4.17□□□□□ -1.74
PTPRM-213ENST00000580949 Q9H8V8 135 aa4.17□□□□□ -1.74
PTPRM-213ENST00000580949 APLNQ9ULZ1 77 aa4.17□□□□□ -1.74
PTPRM-213ENST00000580949 COX7A2LO14548 114 aa4.16□□□□□ -1.74
PTPRM-213ENST00000580949 TAX1BP3O14907 124 aa4.16□□□□□ -1.74
PTPRM-213ENST00000580949 DNAH10OSP0CZ25 163 aa4.16□□□□□ -1.74
PTPRM-213ENST00000580949 GAGE2BQ13066 116 aa4.16□□□□□ -1.74
PTPRM-213ENST00000580949 KIAA0087Q14695 138 aa4.16□□□□□ -1.74
PTPRM-213ENST00000580949 GAGE2EQ4V326 116 aa4.16□□□□□ -1.74
PTPRM-213ENST00000580949 GAGE2AQ6NT46 116 aa4.16□□□□□ -1.74
PTPRM-213ENST00000580949 LINC01561Q8N1V8 128 aa4.16□□□□□ -1.74
PTPRM-213ENST00000580949 SPANXB1Q9NS25 103 aaPredicted RBP4.16□□□□□ -1.74
PTPRM-213ENST00000580949 GAGE2DQ9UEU5 116 aa4.16□□□□□ -1.74
PTPRM-213ENST00000580949 K7ERJ3 54 aa4.15□□□□□ -1.75
PTPRM-213ENST00000580949 CCL18P55774 89 aa4.15□□□□□ -1.75
PTPRM-213ENST00000580949 SRSF9Q13242 221 aaKnown RBP eCLIP4.15□□□□□ -1.75
PTPRM-213ENST00000580949 C2orf82Q6UX34 121 aa4.15□□□□□ -1.75
PTPRM-213ENST00000580949 MUSTN1Q8IVN3 82 aa4.15□□□□□ -1.75
PTPRM-213ENST00000580949 TOMM7Q9P0U1 55 aa4.15□□□□□ -1.75
PTPRM-213ENST00000580949 DYNC2H1Q8NCM8 4307 aaKnown RBP4.15□□□□□ -1.75
PTPRM-213ENST00000580949 TRAV8-4A0A0B4J246 113 aa4.14□□□□□ -1.75
PTPRM-213ENST00000580949 A0A1B0GWB2 263 aa4.14□□□□□ -1.75
PTPRM-213ENST00000580949 TIMM17BO60830 172 aa4.14□□□□□ -1.75
PTPRM-213ENST00000580949 UBE2V1Q13404 147 aa4.14□□□□□ -1.75
PTPRM-213ENST00000580949 MIAQ16674 131 aa4.14□□□□□ -1.75
PTPRM-213ENST00000580949 DAND5Q8N907 189 aa4.14□□□□□ -1.75
PTPRM-213ENST00000580949 UPK3BQ9BT76 320 aa4.14□□□□□ -1.75
PTPRM-213ENST00000580949 KLK5Q9Y337 293 aaPredicted RBP4.14□□□□□ -1.75
PTPRM-213ENST00000580949 A0A0U1RRA0 63 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 IBA57-AS1B1ANH7 110 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 TMEM238C9JI98 176 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 CRPP02741 224 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 PRSS2P07478 247 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 SMIM13P0DJ93 91 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 C6orf226Q5I0X4 101 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 SOSTDC1Q6X4U4 206 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 Q8IZM0 81 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 C6orf223Q8N319 242 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 LINC00526Q96FQ7 95 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 SPANXDQ9BXN6 97 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 NHP2Q9NX24 153 aaKnown RBP4.13□□□□□ -1.75
PTPRM-213ENST00000580949 SPANXCQ9NY87 97 aa4.13□□□□□ -1.75
PTPRM-213ENST00000580949 TENM2Q9NT68 2774 aa4.12□□□□□ -1.75
PTPRM-213ENST00000580949 A6NDN8 102 aa4.12□□□□□ -1.75
PTPRM-213ENST00000580949 CFC1BP0CG36 223 aa4.12□□□□□ -1.75
PTPRM-213ENST00000580949 CFC1P0CG37 223 aa4.12□□□□□ -1.75
PTPRM-213ENST00000580949 NPC2P61916 151 aa4.12□□□□□ -1.75
PTPRM-213ENST00000580949 HERV-K104P63124 156 aa4.12□□□□□ -1.75
PTPRM-213ENST00000580949 CASC10Q5T4H9 136 aa4.12□□□□□ -1.75
PTPRM-213ENST00000580949 LINC00308Q8TCZ7 52 aa4.12□□□□□ -1.75
PTPRM-213ENST00000580949 RAB37Q96AX2 223 aa4.12□□□□□ -1.75
PTPRM-213ENST00000580949 NAA38Q9BRA0 125 aaKnown RBP4.12□□□□□ -1.75
PTPRM-213ENST00000580949 KRTAP1-5Q9BYS1 174 aa4.12□□□□□ -1.75
PTPRM-213ENST00000580949 Q9HAA7 133 aa4.12□□□□□ -1.75
PTPRM-213ENST00000580949 PLECQ15149 4684 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms