RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 ERASQ7Z444 233 aa8.8□□□□□ -1
SMARCE1-216ENST00000580419 RNF213Q63HN8 5207 aa8.79□□□□□ -1
SMARCE1-216ENST00000580419 M0QXV9 152 aa8.79□□□□□ -1
SMARCE1-216ENST00000580419 CKS1BP61024 79 aa8.79□□□□□ -1
SMARCE1-216ENST00000580419 COX19Q49B96 90 aa8.79□□□□□ -1
SMARCE1-216ENST00000580419 GAGE2EQ4V326 116 aa8.79□□□□□ -1
SMARCE1-216ENST00000580419 C6orf226Q5I0X4 101 aa8.79□□□□□ -1
SMARCE1-216ENST00000580419 C9orf129Q5T035 196 aaKnown RBP8.79□□□□□ -1
SMARCE1-216ENST00000580419 C2orf82Q6UX34 121 aa8.79□□□□□ -1
SMARCE1-216ENST00000580419 GAGE2DQ9UEU5 116 aa8.79□□□□□ -1
SMARCE1-216ENST00000580419 TP73-AS1Q9UF72 201 aa8.79□□□□□ -1
SMARCE1-216ENST00000580419 GNB1LQ9BYB4 327 aa8.78□□□□□ -1
SMARCE1-216ENST00000580419 IGLV5-45A0A087WSX0 123 aa8.77□□□□□ -1.01
SMARCE1-216ENST00000580419 TMEM218A2RU14 115 aa8.77□□□□□ -1.01
SMARCE1-216ENST00000580419 F8VRH5 84 aa8.77□□□□□ -1.01
SMARCE1-216ENST00000580419 NUPR1O60356 82 aa8.77□□□□□ -1.01
SMARCE1-216ENST00000580419 FAM19A5Q7Z5A7 132 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1-216ENST00000580419 KRTAP11-1Q8IUC1 163 aa8.77□□□□□ -1.01
SMARCE1-216ENST00000580419 ALKBH7Q9BT30 221 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1-216ENST00000580419 SEC11CQ9BY50 192 aa8.77□□□□□ -1.01
SMARCE1-216ENST00000580419 CARHSP1Q9Y2V2 147 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-216ENST00000580419 KRTAP1-4P0C5Y4 121 aa8.76□□□□□ -1.01
SMARCE1-216ENST00000580419 RPL13AP40429 203 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-216ENST00000580419 LBHQ53QV2 105 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-216ENST00000580419 GEMIN7Q9H840 131 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-216ENST00000580419 CDKN2A-AS1Q9UH64 79 aa8.76□□□□□ -1.01
SMARCE1-216ENST00000580419 TINCRA0A1B0GVN0 87 aa8.75□□□□□ -1.01
SMARCE1-216ENST00000580419 UBE2BP63146 152 aa8.75□□□□□ -1.01
SMARCE1-216ENST00000580419 PDZD11Q5EBL8 140 aa8.75□□□□□ -1.01
SMARCE1-216ENST00000580419 ADCYAP1P18509 176 aa8.74□□□□□ -1.01
SMARCE1-216ENST00000580419 ZNF861PO60384 105 aa8.73□□□□□ -1.01
SMARCE1-216ENST00000580419 S100PP25815 95 aa8.73□□□□□ -1.01
SMARCE1-216ENST00000580419 ZC2HC1BQ5TFG8 222 aa8.73□□□□□ -1.01
SMARCE1-216ENST00000580419 SCGB3A1Q96QR1 104 aa8.73□□□□□ -1.01
SMARCE1-216ENST00000580419 TOMM7Q9P0U1 55 aa8.73□□□□□ -1.01
SMARCE1-216ENST00000580419 SMIM1B2RUZ4 78 aa8.72□□□□□ -1.01
SMARCE1-216ENST00000580419 PRR26Q8N8Z3 221 aa8.72□□□□□ -1.01
SMARCE1-216ENST00000580419 MRPL18Q9H0U6 180 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-216ENST00000580419 C22orf24Q9Y442 160 aa8.72□□□□□ -1.01
SMARCE1-216ENST00000580419 C10orf91Q5T1B1 145 aa8.71□□□□□ -1.02
SMARCE1-216ENST00000580419 LINC00469Q8N7U9 141 aa8.7□□□□□ -1.02
SMARCE1-216ENST00000580419 CST9LQ9H4G1 147 aa8.7□□□□□ -1.02
SMARCE1-216ENST00000580419 IGLV5-37A0A075B6J1 123 aa8.69□□□□□ -1.02
SMARCE1-216ENST00000580419 PMVKQ15126 192 aa8.69□□□□□ -1.02
SMARCE1-216ENST00000580419 RHEBQ15382 184 aa8.69□□□□□ -1.02
SMARCE1-216ENST00000580419 KIAA1644Q3SXP7 199 aa8.69□□□□□ -1.02
SMARCE1-216ENST00000580419 MRPL55Q7Z7F7 128 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-216ENST00000580419 COX7B2Q8TF08 81 aa8.68□□□□□ -1.02
SMARCE1-216ENST00000580419 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-216ENST00000580419 IFITM2Q01629 132 aa8.67□□□□□ -1.02
SMARCE1-216ENST00000580419 XAGE1AQ9HD64 81 aa8.67□□□□□ -1.02
SMARCE1-216ENST00000580419 H3BRM9 83 aa8.66□□□□□ -1.02
SMARCE1-216ENST00000580419 BCE1O60756 84 aa8.66□□□□□ -1.02
SMARCE1-216ENST00000580419 SFTA2Q6UW10 78 aa8.66□□□□□ -1.02
SMARCE1-216ENST00000580419 IGLV5-39A0A0G2JS06 123 aa8.65□□□□□ -1.02
SMARCE1-216ENST00000580419 FA2HQ7L5A8 372 aa8.65□□□□□ -1.02
SMARCE1-216ENST00000580419 IGLC3P0DOY3 106 aa8.64□□□□□ -1.03
SMARCE1-216ENST00000580419 CTAG1AP78358 180 aa8.64□□□□□ -1.03
SMARCE1-216ENST00000580419 COX17Q14061 63 aa8.64□□□□□ -1.03
SMARCE1-216ENST00000580419 SMCO4Q9NRQ5 59 aa8.64□□□□□ -1.03
SMARCE1-216ENST00000580419 LPAP08519 4548 aa8.64□□□□□ -1.03
SMARCE1-216ENST00000580419 ATP5LO75964 103 aa8.62□□□□□ -1.03
SMARCE1-216ENST00000580419 FABP9Q0Z7S8 132 aa8.62□□□□□ -1.03
SMARCE1-216ENST00000580419 LINC00167Q96N53 147 aa8.62□□□□□ -1.03
SMARCE1-216ENST00000580419 KRTAP13-1Q8IUC0 172 aa8.61□□□□□ -1.03
SMARCE1-216ENST00000580419 A0A096LNJ9 63 aa8.6□□□□□ -1.03
SMARCE1-216ENST00000580419 SPINK8P0C7L1 97 aa8.6□□□□□ -1.03
SMARCE1-216ENST00000580419 LINC00614P0C842 121 aa8.6□□□□□ -1.03
SMARCE1-216ENST00000580419 RAB5BP61020 215 aa8.6□□□□□ -1.03
SMARCE1-216ENST00000580419 HBDP02042 147 aa8.59□□□□□ -1.03
SMARCE1-216ENST00000580419 CRYGAP11844 174 aa8.59□□□□□ -1.03
SMARCE1-216ENST00000580419 FAM229BQ4G0N7 80 aa8.59□□□□□ -1.03
SMARCE1-216ENST00000580419 COMMD7Q86VX2 200 aa8.59□□□□□ -1.03
SMARCE1-216ENST00000580419 NKAPP1Q8N9T2 125 aa8.59□□□□□ -1.03
SMARCE1-216ENST00000580419 C18orf32Q8TCD1 76 aa8.59□□□□□ -1.03
SMARCE1-216ENST00000580419 RPS10P5Q9NQ39 176 aa8.58□□□□□ -1.04
SMARCE1-216ENST00000580419 ZNF22P17026 224 aaPredicted RBP8.57□□□□□ -1.04
SMARCE1-216ENST00000580419 URB1-AS1Q96HZ7 61 aa8.57□□□□□ -1.04
SMARCE1-216ENST00000580419 RPL24P83731 157 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-216ENST00000580419 TRAPPC1Q9Y5R8 145 aa8.56□□□□□ -1.04
SMARCE1-216ENST00000580419 ERG28Q9UKR5 140 aa8.55□□□□□ -1.04
SMARCE1-216ENST00000580419 A0A087X002 238 aa8.54□□□□□ -1.04
SMARCE1-216ENST00000580419 RPL37AP8A6NKH3 93 aa8.54□□□□□ -1.04
SMARCE1-216ENST00000580419 VPREB1P12018 145 aa8.54□□□□□ -1.04
SMARCE1-216ENST00000580419 SND1-IT1Q9HBX3 110 aa8.54□□□□□ -1.04
SMARCE1-216ENST00000580419 SVBPQ8N300 66 aa8.53□□□□□ -1.04
SMARCE1-216ENST00000580419 TYMSOSQ8TAI1 123 aa8.53□□□□□ -1.04
SMARCE1-216ENST00000580419 ZNF625Q96I27 306 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-216ENST00000580419 TRAV12-1A0A0B4J245 112 aa8.52□□□□□ -1.05
SMARCE1-216ENST00000580419 SNAPINO95295 136 aa8.52□□□□□ -1.05
SMARCE1-216ENST00000580419 UBE2AP49459 152 aa8.52□□□□□ -1.05
SMARCE1-216ENST00000580419 XP32Q5T750 250 aa8.52□□□□□ -1.05
SMARCE1-216ENST00000580419 C11orf86A6NJI1 115 aa8.51□□□□□ -1.05
SMARCE1-216ENST00000580419 PFN2P35080 140 aa8.51□□□□□ -1.05
SMARCE1-216ENST00000580419 NDUFA5Q16718 116 aa8.51□□□□□ -1.05
SMARCE1-216ENST00000580419 BAGE3Q86Y29 109 aa8.51□□□□□ -1.05
SMARCE1-216ENST00000580419 CHCHD1Q96BP2 118 aaKnown RBP8.51□□□□□ -1.05
SMARCE1-216ENST00000580419 GAGE10A6NGK3 116 aa8.5□□□□□ -1.05
SMARCE1-216ENST00000580419 NDUFA6P56556 154 aa8.5□□□□□ -1.05
SMARCE1-216ENST00000580419 MUC2Q02817 5179 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms