RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 Q6ZN92 141 aa5.64□□□□□ -1.51
CDK5RAP3-211ENST00000578996 PACRGQ96M98 296 aaPredicted RBP5.64□□□□□ -1.51
CDK5RAP3-211ENST00000578996 CYSLTR1Q9Y271 337 aa5.64□□□□□ -1.51
CDK5RAP3-211ENST00000578996 PYGO1Q9Y3Y4 419 aa5.64□□□□□ -1.51
CDK5RAP3-211ENST00000578996 TRAPPC1Q9Y5R8 145 aa5.64□□□□□ -1.51
CDK5RAP3-211ENST00000578996 M0QXV9 152 aa5.63□□□□□ -1.51
CDK5RAP3-211ENST00000578996 IGLV7-43P04211 117 aa5.63□□□□□ -1.51
CDK5RAP3-211ENST00000578996 PRSS2P07478 247 aa5.63□□□□□ -1.51
CDK5RAP3-211ENST00000578996 TLX1NBP0CAT3 122 aa5.63□□□□□ -1.51
CDK5RAP3-211ENST00000578996 UBE2D1P51668 147 aa5.63□□□□□ -1.51
CDK5RAP3-211ENST00000578996 C2orf66Q6UXQ4 117 aa5.63□□□□□ -1.51
CDK5RAP3-211ENST00000578996 TOMM7Q9P0U1 55 aa5.63□□□□□ -1.51
CDK5RAP3-211ENST00000578996 LAMTOR2Q9Y2Q5 125 aa5.63□□□□□ -1.51
CDK5RAP3-211ENST00000578996 LRP2P98164 4655 aa5.63□□□□□ -1.51
CDK5RAP3-211ENST00000578996 FABP9Q0Z7S8 132 aa5.62□□□□□ -1.51
CDK5RAP3-211ENST00000578996 KIAA0087Q14695 138 aa5.62□□□□□ -1.51
CDK5RAP3-211ENST00000578996 KRTAP11-1Q8IUC1 163 aa5.62□□□□□ -1.51
CDK5RAP3-211ENST00000578996 Q8N8P6 123 aa5.62□□□□□ -1.51
CDK5RAP3-211ENST00000578996 DIRC1Q969H9 104 aa5.62□□□□□ -1.51
CDK5RAP3-211ENST00000578996 MRPL18Q9H0U6 180 aaKnown RBP5.62□□□□□ -1.51
CDK5RAP3-211ENST00000578996 VCX2Q9H322 139 aa5.62□□□□□ -1.51
CDK5RAP3-211ENST00000578996 TRBV30A0A0K0K1B3 111 aa5.61□□□□□ -1.51
CDK5RAP3-211ENST00000578996 PRSS47A8MTI9 375 aa5.61□□□□□ -1.51
CDK5RAP3-211ENST00000578996 CKS1BP61024 79 aa5.61□□□□□ -1.51
CDK5RAP3-211ENST00000578996 SNRPEP62304 92 aaKnown RBP5.61□□□□□ -1.51
CDK5RAP3-211ENST00000578996 ORMDL2Q53FV1 153 aa5.61□□□□□ -1.51
CDK5RAP3-211ENST00000578996 RNF213Q63HN8 5207 aa5.61□□□□□ -1.51
CDK5RAP3-211ENST00000578996 PRR26Q8N8Z3 221 aa5.61□□□□□ -1.51
CDK5RAP3-211ENST00000578996 NDUFC2-KCTD14E9PQ53 114 aa5.6□□□□□ -1.51
CDK5RAP3-211ENST00000578996 H0Y9J4 135 aa5.6□□□□□ -1.51
CDK5RAP3-211ENST00000578996 C6orf226Q5I0X4 101 aa5.6□□□□□ -1.51
CDK5RAP3-211ENST00000578996 LINC00173Q6ZV60 143 aa5.6□□□□□ -1.51
CDK5RAP3-211ENST00000578996 LINC00469Q8N7U9 141 aa5.6□□□□□ -1.51
CDK5RAP3-211ENST00000578996 NDUFA6P56556 154 aa5.59□□□□□ -1.51
CDK5RAP3-211ENST00000578996 C9orf129Q5T035 196 aaKnown RBP5.59□□□□□ -1.51
CDK5RAP3-211ENST00000578996 KRTAP7-1Q8IUC3 87 aa5.59□□□□□ -1.51
CDK5RAP3-211ENST00000578996 LINC01561Q8N1V8 128 aa5.59□□□□□ -1.51
CDK5RAP3-211ENST00000578996 AMELXQ99217 191 aa5.59□□□□□ -1.51
CDK5RAP3-211ENST00000578996 ALKBH7Q9BT30 221 aaPredicted RBP5.59□□□□□ -1.51
CDK5RAP3-211ENST00000578996 HERVK_113P63121 156 aa5.58□□□□□ -1.52
CDK5RAP3-211ENST00000578996 KIAA1644Q3SXP7 199 aa5.58□□□□□ -1.52
CDK5RAP3-211ENST00000578996 HIST3H2BBQ8N257 126 aa5.58□□□□□ -1.52
CDK5RAP3-211ENST00000578996 GEMIN7Q9H840 131 aaKnown RBP5.58□□□□□ -1.52
CDK5RAP3-211ENST00000578996 NXT2Q9NPJ8 142 aaKnown RBP5.58□□□□□ -1.52
CDK5RAP3-211ENST00000578996 IGIPA6NJ69 53 aa5.57□□□□□ -1.52
CDK5RAP3-211ENST00000578996 K7EMI3 77 aa5.57□□□□□ -1.52
CDK5RAP3-211ENST00000578996 PAPPA-AS1Q5QFB9 102 aa5.57□□□□□ -1.52
CDK5RAP3-211ENST00000578996 Q8IZM0 81 aa5.57□□□□□ -1.52
CDK5RAP3-211ENST00000578996 XAGE1AQ9HD64 81 aa5.57□□□□□ -1.52
CDK5RAP3-211ENST00000578996 CDKN2A-AS1Q9UH64 79 aa5.57□□□□□ -1.52
CDK5RAP3-211ENST00000578996 NPSP0C0P6 89 aa5.56□□□□□ -1.52
CDK5RAP3-211ENST00000578996 G0S2P27469 103 aa5.56□□□□□ -1.52
CDK5RAP3-211ENST00000578996 SEC11AP67812 179 aa5.56□□□□□ -1.52
CDK5RAP3-211ENST00000578996 SCGB3A1Q96QR1 104 aa5.56□□□□□ -1.52
CDK5RAP3-211ENST00000578996 TIMM17AQ99595 171 aa5.56□□□□□ -1.52
CDK5RAP3-211ENST00000578996 C22orf24Q9Y442 160 aa5.56□□□□□ -1.52
CDK5RAP3-211ENST00000578996 LPAP08519 4548 aa5.55□□□□□ -1.52
CDK5RAP3-211ENST00000578996 IGLV1-50A0A075B6I6 118 aa5.55□□□□□ -1.52
CDK5RAP3-211ENST00000578996 F8VRH5 84 aa5.55□□□□□ -1.52
CDK5RAP3-211ENST00000578996 SMIM6P0DI80 62 aa5.55□□□□□ -1.52
CDK5RAP3-211ENST00000578996 S100A2P29034 98 aa5.55□□□□□ -1.52
CDK5RAP3-211ENST00000578996 FAM19A3Q7Z5A8 133 aa5.55□□□□□ -1.52
CDK5RAP3-211ENST00000578996 C18orf32Q8TCD1 76 aa5.55□□□□□ -1.52
CDK5RAP3-211ENST00000578996 TOMM6Q96B49 74 aa5.55□□□□□ -1.52
CDK5RAP3-211ENST00000578996 HIST1H2BLQ99880 126 aa5.55□□□□□ -1.52
CDK5RAP3-211ENST00000578996 KRTAP1-4P0C5Y4 121 aa5.54□□□□□ -1.52
CDK5RAP3-211ENST00000578996 LBHQ53QV2 105 aaPredicted RBP5.54□□□□□ -1.52
CDK5RAP3-211ENST00000578996 ERASQ7Z444 233 aa5.54□□□□□ -1.52
CDK5RAP3-211ENST00000578996 BAGE3Q86Y29 109 aa5.54□□□□□ -1.52
CDK5RAP3-211ENST00000578996 CHCHD1Q96BP2 118 aaKnown RBP5.54□□□□□ -1.52
CDK5RAP3-211ENST00000578996 KRTAP3-3Q9BYR6 98 aa5.54□□□□□ -1.52
CDK5RAP3-211ENST00000578996 KRTAP3-2Q9BYR7 98 aa5.54□□□□□ -1.52
CDK5RAP3-211ENST00000578996 NUPR1O60356 82 aa5.53□□□□□ -1.52
CDK5RAP3-211ENST00000578996 ZNF861PO60384 105 aa5.53□□□□□ -1.52
CDK5RAP3-211ENST00000578996 SERF1AO75920 110 aa5.53□□□□□ -1.52
CDK5RAP3-211ENST00000578996 RPL13AP40429 203 aaKnown RBP5.53□□□□□ -1.52
CDK5RAP3-211ENST00000578996 CXCL5P42830 114 aa5.53□□□□□ -1.52
CDK5RAP3-211ENST00000578996 AKR1D1P51857 326 aa5.53□□□□□ -1.52
CDK5RAP3-211ENST00000578996 LINC00310P59036 64 aa5.53□□□□□ -1.52
CDK5RAP3-211ENST00000578996 MRPL55Q7Z7F7 128 aaKnown RBP5.53□□□□□ -1.52
CDK5RAP3-211ENST00000578996 LINC00518Q8N0U6 118 aa5.53□□□□□ -1.52
CDK5RAP3-211ENST00000578996 TINCRA0A1B0GVN0 87 aa5.52□□□□□ -1.53
CDK5RAP3-211ENST00000578996 SMIM1B2RUZ4 78 aa5.52□□□□□ -1.53
CDK5RAP3-211ENST00000578996 SPINK8P0C7L1 97 aa5.52□□□□□ -1.53
CDK5RAP3-211ENST00000578996 FABP4P15090 132 aa5.52□□□□□ -1.53
CDK5RAP3-211ENST00000578996 PRR4Q16378 134 aa5.52□□□□□ -1.53
CDK5RAP3-211ENST00000578996 COX7B2Q8TF08 81 aa5.52□□□□□ -1.53
CDK5RAP3-211ENST00000578996 GAGE10A6NGK3 116 aa5.51□□□□□ -1.53
CDK5RAP3-211ENST00000578996 LINC01546A6NGU7 62 aa5.51□□□□□ -1.53
CDK5RAP3-211ENST00000578996 RPL37AP8A6NKH3 93 aa5.51□□□□□ -1.53
CDK5RAP3-211ENST00000578996 PDZD11Q5EBL8 140 aa5.51□□□□□ -1.53
CDK5RAP3-211ENST00000578996 FA2HQ7L5A8 372 aa5.51□□□□□ -1.53
CDK5RAP3-211ENST00000578996 LINC00614P0C842 121 aa5.5□□□□□ -1.53
CDK5RAP3-211ENST00000578996 RPL28P46779 137 aaKnown RBP5.5□□□□□ -1.53
CDK5RAP3-211ENST00000578996 JOSD1Q15040 202 aaPredicted RBP5.5□□□□□ -1.53
CDK5RAP3-211ENST00000578996 CST9LQ9H4G1 147 aa5.5□□□□□ -1.53
CDK5RAP3-211ENST00000578996 TP73-AS1Q9UF72 201 aa5.5□□□□□ -1.53
CDK5RAP3-211ENST00000578996 LINC01549A6NIU2 74 aa5.49□□□□□ -1.53
CDK5RAP3-211ENST00000578996 BCE1O60756 84 aa5.49□□□□□ -1.53
CDK5RAP3-211ENST00000578996 HSBP1O75506 76 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms