RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 HERVK_113P63121 156 aa8.9□□□□□ -0.98
CCDC57-212ENST00000578910 SEC11AP67812 179 aa8.9□□□□□ -0.98
CCDC57-212ENST00000578910 C9orf129Q5T035 196 aaKnown RBP8.9□□□□□ -0.98
CCDC57-212ENST00000578910 C10orf91Q5T1B1 145 aa8.9□□□□□ -0.98
CCDC57-212ENST00000578910 LINC01546A6NGU7 62 aa8.89□□□□□ -0.99
CCDC57-212ENST00000578910 CKS1BP61024 79 aa8.89□□□□□ -0.99
CCDC57-212ENST00000578910 FABP9Q0Z7S8 132 aa8.89□□□□□ -0.99
CCDC57-212ENST00000578910 Q8IZM0 81 aa8.89□□□□□ -0.99
CCDC57-212ENST00000578910 GEMIN7Q9H840 131 aaKnown RBP8.89□□□□□ -0.99
CCDC57-212ENST00000578910 RPS10P5Q9NQ39 176 aa8.89□□□□□ -0.99
CCDC57-212ENST00000578910 IGLV7-43P04211 117 aa8.88□□□□□ -0.99
CCDC57-212ENST00000578910 MRPL18Q9H0U6 180 aaKnown RBP8.88□□□□□ -0.99
CCDC57-212ENST00000578910 COX19Q49B96 90 aa8.87□□□□□ -0.99
CCDC57-212ENST00000578910 LINC00469Q8N7U9 141 aa8.87□□□□□ -0.99
CCDC57-212ENST00000578910 M0QXV9 152 aa8.86□□□□□ -0.99
CCDC57-212ENST00000578910 CST9LQ9H4G1 147 aa8.86□□□□□ -0.99
CCDC57-212ENST00000578910 CARHSP1Q9Y2V2 147 aaKnown RBP8.86□□□□□ -0.99
CCDC57-212ENST00000578910 TINCRA0A1B0GVN0 87 aa8.85□□□□□ -0.99
CCDC57-212ENST00000578910 LINC01549A6NIU2 74 aa8.85□□□□□ -0.99
CCDC57-212ENST00000578910 F8VRH5 84 aa8.84□□□□□ -0.99
CCDC57-212ENST00000578910 UBE2BP63146 152 aa8.84□□□□□ -0.99
CCDC57-212ENST00000578910 RHEBQ15382 184 aa8.84□□□□□ -0.99
CCDC57-212ENST00000578910 FA2HQ7L5A8 372 aa8.84□□□□□ -0.99
CCDC57-212ENST00000578910 DIRC1Q969H9 104 aa8.84□□□□□ -0.99
CCDC57-212ENST00000578910 XAGE1AQ9HD64 81 aa8.84□□□□□ -0.99
CCDC57-212ENST00000578910 SMIM1B2RUZ4 78 aa8.83□□□□□ -1
CCDC57-212ENST00000578910 PMVKQ15126 192 aa8.83□□□□□ -1
CCDC57-212ENST00000578910 PDZD11Q5EBL8 140 aa8.83□□□□□ -1
CCDC57-212ENST00000578910 SMCO4Q9NRQ5 59 aa8.83□□□□□ -1
CCDC57-212ENST00000578910 C22orf24Q9Y442 160 aa8.83□□□□□ -1
CCDC57-212ENST00000578910 COX7B2Q8TF08 81 aa8.82□□□□□ -1
CCDC57-212ENST00000578910 IGLV5-45A0A087WSX0 123 aa8.81□□□□□ -1
CCDC57-212ENST00000578910 H0Y9J4 135 aa8.81□□□□□ -1
CCDC57-212ENST00000578910 PRR26Q8N8Z3 221 aa8.81□□□□□ -1
CCDC57-212ENST00000578910 URB1-AS1Q96HZ7 61 aa8.81□□□□□ -1
CCDC57-212ENST00000578910 TRAPPC1Q9Y5R8 145 aa8.81□□□□□ -1
CCDC57-212ENST00000578910 SPINK8P0C7L1 97 aa8.8□□□□□ -1
CCDC57-212ENST00000578910 LINC00614P0C842 121 aa8.8□□□□□ -1
CCDC57-212ENST00000578910 CXCL5P42830 114 aa8.8□□□□□ -1
CCDC57-212ENST00000578910 A0A096LNJ9 63 aa8.79□□□□□ -1
CCDC57-212ENST00000578910 APOC3P02656 99 aa8.79□□□□□ -1
CCDC57-212ENST00000578910 RAB5BP61020 215 aa8.79□□□□□ -1
CCDC57-212ENST00000578910 C18orf32Q8TCD1 76 aa8.79□□□□□ -1
CCDC57-212ENST00000578910 LRP2P98164 4655 aa8.78□□□□□ -1
CCDC57-212ENST00000578910 NDUFA6P56556 154 aa8.78□□□□□ -1
CCDC57-212ENST00000578910 LBHQ53QV2 105 aaPredicted RBP8.77□□□□□ -1.01
CCDC57-212ENST00000578910 KRTAP1-4P0C5Y4 121 aa8.76□□□□□ -1.01
CCDC57-212ENST00000578910 PMCHL1Q16048 86 aa8.76□□□□□ -1.01
CCDC57-212ENST00000578910 H3BRM9 83 aa8.75□□□□□ -1.01
CCDC57-212ENST00000578910 ZNF861PO60384 105 aa8.75□□□□□ -1.01
CCDC57-212ENST00000578910 SNAPINO95295 136 aa8.75□□□□□ -1.01
CCDC57-212ENST00000578910 IGLC3P0DOY3 106 aa8.75□□□□□ -1.01
CCDC57-212ENST00000578910 MRPL55Q7Z7F7 128 aaKnown RBP8.75□□□□□ -1.01
CCDC57-212ENST00000578910 LINC00167Q96N53 147 aa8.75□□□□□ -1.01
CCDC57-212ENST00000578910 TP73-AS1Q9UF72 201 aa8.75□□□□□ -1.01
CCDC57-212ENST00000578910 NUPR1O60356 82 aa8.74□□□□□ -1.01
CCDC57-212ENST00000578910 HBDP02042 147 aa8.74□□□□□ -1.01
CCDC57-212ENST00000578910 IGLV1-50A0A075B6I6 118 aa8.73□□□□□ -1.01
CCDC57-212ENST00000578910 IGLV5-39A0A0G2JS06 123 aa8.73□□□□□ -1.01
CCDC57-212ENST00000578910 RPL37AP8A6NKH3 93 aa8.73□□□□□ -1.01
CCDC57-212ENST00000578910 ZNF22P17026 224 aaPredicted RBP8.73□□□□□ -1.01
CCDC57-212ENST00000578910 BAGE3Q86Y29 109 aa8.73□□□□□ -1.01
CCDC57-212ENST00000578910 SVBPQ8N300 66 aa8.73□□□□□ -1.01
CCDC57-212ENST00000578910 NDUFA5Q16718 116 aa8.72□□□□□ -1.01
CCDC57-212ENST00000578910 ATP5LO75964 103 aa8.71□□□□□ -1.02
CCDC57-212ENST00000578910 PFN2P35080 140 aa8.71□□□□□ -1.02
CCDC57-212ENST00000578910 YPEL4Q96NS1 127 aa8.71□□□□□ -1.02
CCDC57-212ENST00000578910 GAGE10A6NGK3 116 aa8.7□□□□□ -1.02
CCDC57-212ENST00000578910 C11orf86A6NJI1 115 aa8.7□□□□□ -1.02
CCDC57-212ENST00000578910 IGLV5-37A0A075B6J1 123 aa8.69□□□□□ -1.02
CCDC57-212ENST00000578910 ZNF625Q96I27 306 aaPredicted RBP8.69□□□□□ -1.02
CCDC57-212ENST00000578910 BCE1O60756 84 aa8.68□□□□□ -1.02
CCDC57-212ENST00000578910 SCO1O75880 301 aa8.68□□□□□ -1.02
CCDC57-212ENST00000578910 TMEM170BQ5T4T1 132 aa8.68□□□□□ -1.02
CCDC57-212ENST00000578910 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
CCDC57-212ENST00000578910 NKAPP1Q8N9T2 125 aa8.67□□□□□ -1.02
CCDC57-212ENST00000578910 CHTOPQ9Y3Y2 248 aaKnown RBP8.67□□□□□ -1.02
CCDC57-212ENST00000578910 SND1-IT1Q9HBX3 110 aa8.66□□□□□ -1.02
CCDC57-212ENST00000578910 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
CCDC57-212ENST00000578910 RPL13AP40429 203 aaKnown RBP8.65□□□□□ -1.02
CCDC57-212ENST00000578910 COX17Q14061 63 aa8.65□□□□□ -1.02
CCDC57-212ENST00000578910 CHCHD1Q96BP2 118 aaKnown RBP8.65□□□□□ -1.02
CCDC57-212ENST00000578910 LPAP08519 4548 aa8.64□□□□□ -1.03
CCDC57-212ENST00000578910 VPREB1P12018 145 aa8.64□□□□□ -1.03
CCDC57-212ENST00000578910 IGKV2-28A0A075B6P5 120 aa8.63□□□□□ -1.03
CCDC57-212ENST00000578910 IGKV2D-28P01615 120 aa8.63□□□□□ -1.03
CCDC57-212ENST00000578910 IFI27L1Q96BM0 104 aa8.63□□□□□ -1.03
CCDC57-212ENST00000578910 ANAPC11Q9NYG5 84 aa8.63□□□□□ -1.03
CCDC57-212ENST00000578910 RNF213Q63HN8 5207 aa8.62□□□□□ -1.03
CCDC57-212ENST00000578910 TRAV12-1A0A0B4J245 112 aa8.62□□□□□ -1.03
CCDC57-212ENST00000578910 TMEM223A0PJW6 202 aa8.62□□□□□ -1.03
CCDC57-212ENST00000578910 KRTAP13-1Q8IUC0 172 aa8.62□□□□□ -1.03
CCDC57-212ENST00000578910 CBLN2Q8IUK8 224 aa8.62□□□□□ -1.03
CCDC57-212ENST00000578910 FAM19A2Q8N3H0 131 aa8.62□□□□□ -1.03
CCDC57-212ENST00000578910 Q8NDZ9 215 aa8.62□□□□□ -1.03
CCDC57-212ENST00000578910 A0A087X002 238 aa8.61□□□□□ -1.03
CCDC57-212ENST00000578910 UBE2AP49459 152 aa8.61□□□□□ -1.03
CCDC57-212ENST00000578910 RPL24P83731 157 aaKnown RBP8.61□□□□□ -1.03
CCDC57-212ENST00000578910 A0A0U1RRA0 63 aa8.6□□□□□ -1.03
CCDC57-212ENST00000578910 LINC00158P58513 81 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms