RNA–Protein interactions for RNA: ENST00000578386.5

SMURF2-203, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene SMURF2, Length 3,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-203ENST00000578386 CIRBPQ14011 172 aaKnown RBP7.03□□□□□ -1.28
SMURF2-203ENST00000578386 MIR7-3HGQ8N6C7 128 aa7.03□□□□□ -1.28
SMURF2-203ENST00000578386 SPANXDQ9BXN6 97 aa7.03□□□□□ -1.28
SMURF2-203ENST00000578386 SPANXCQ9NY87 97 aa7.03□□□□□ -1.28
SMURF2-203ENST00000578386 C9orf116Q5BN46 136 aaPredicted RBP7.03□□□□□ -1.28
SMURF2-203ENST00000578386 DNAH9Q9NYC9 4486 aa7.02□□□□□ -1.29
SMURF2-203ENST00000578386 C6orf223Q8N319 242 aa7.02□□□□□ -1.29
SMURF2-203ENST00000578386 GAGE12HA6NDE8 117 aa7.02□□□□□ -1.29
SMURF2-203ENST00000578386 WFDC2Q14508 124 aa7.02□□□□□ -1.29
SMURF2-203ENST00000578386 ENHOQ6UWT2 76 aa7.02□□□□□ -1.29
SMURF2-203ENST00000578386 ERG28Q9UKR5 140 aa7.02□□□□□ -1.29
SMURF2-203ENST00000578386 MALP21145 153 aa7.01□□□□□ -1.29
SMURF2-203ENST00000578386 TCL1BO95988 128 aa7.01□□□□□ -1.29
SMURF2-203ENST00000578386 TEX48A0A1B0GUV7 120 aa7.01□□□□□ -1.29
SMURF2-203ENST00000578386 COX7A2LO14548 114 aa7.01□□□□□ -1.29
SMURF2-203ENST00000578386 SPATA25Q9BR10 227 aa7.01□□□□□ -1.29
SMURF2-203ENST00000578386 CD164L2Q6UWJ8 174 aa7□□□□□ -1.29
SMURF2-203ENST00000578386 SH2D6Q7Z4S9 175 aa7□□□□□ -1.29
SMURF2-203ENST00000578386 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.99□□□□□ -1.29
SMURF2-203ENST00000578386 RPL13AP40429 203 aaKnown RBP6.99□□□□□ -1.29
SMURF2-203ENST00000578386 FOXI1Q12951 378 aa6.99□□□□□ -1.29
SMURF2-203ENST00000578386 TM2D3Q9BRN9 247 aa6.99□□□□□ -1.29
SMURF2-203ENST00000578386 CSMD3Q7Z407 3707 aa6.99□□□□□ -1.29
SMURF2-203ENST00000578386 A0A0B4J2C4 111 aa6.99□□□□□ -1.29
SMURF2-203ENST00000578386 TRIAP1O43715 76 aa6.98□□□□□ -1.29
SMURF2-203ENST00000578386 RNF151Q2KHN1 245 aa6.98□□□□□ -1.29
SMURF2-203ENST00000578386 C10orf25Q5T742 122 aa6.98□□□□□ -1.29
SMURF2-203ENST00000578386 TIMM17BO60830 172 aa6.98□□□□□ -1.29
SMURF2-203ENST00000578386 CRPP02741 224 aa6.98□□□□□ -1.29
SMURF2-203ENST00000578386 CKS1BP61024 79 aa6.98□□□□□ -1.29
SMURF2-203ENST00000578386 HERV-K104P63124 156 aa6.98□□□□□ -1.29
SMURF2-203ENST00000578386 Q9HAA7 133 aa6.98□□□□□ -1.29
SMURF2-203ENST00000578386 PRR3P79522 188 aaKnown RBP6.97□□□□□ -1.29
SMURF2-203ENST00000578386 KIAA0087Q14695 138 aa6.97□□□□□ -1.29
SMURF2-203ENST00000578386 ETDBQ3ZM63 59 aa6.97□□□□□ -1.29
SMURF2-203ENST00000578386 CLEC2BQ92478 149 aa6.97□□□□□ -1.29
SMURF2-203ENST00000578386 PRKDCP78527 4128 aaKnown RBP6.97□□□□□ -1.29
SMURF2-203ENST00000578386 HIGD2BQ4VC39 106 aa6.97□□□□□ -1.29
SMURF2-203ENST00000578386 CCL18P55774 89 aa6.96□□□□□ -1.29
SMURF2-203ENST00000578386 UNQ6190/PRO20217Q6UXQ8 127 aa6.96□□□□□ -1.29
SMURF2-203ENST00000578386 IFITM1P13164 125 aa6.96□□□□□ -1.3
SMURF2-203ENST00000578386 CFAP161Q6P656 301 aa6.96□□□□□ -1.3
SMURF2-203ENST00000578386 OCIAD2Q56VL3 154 aa6.96□□□□□ -1.3
SMURF2-203ENST00000578386 PRR34Q9NV39 138 aa6.96□□□□□ -1.3
SMURF2-203ENST00000578386 SMCPP49901 116 aaPredicted RBP6.95□□□□□ -1.3
SMURF2-203ENST00000578386 Q8IZM0 81 aa6.95□□□□□ -1.3
SMURF2-203ENST00000578386 SND1-IT1Q9HBX3 110 aa6.95□□□□□ -1.3
SMURF2-203ENST00000578386 DNAH7Q8WXX0 4024 aa6.95□□□□□ -1.3
SMURF2-203ENST00000578386 SPAG11BQ08648 103 aa6.95□□□□□ -1.3
SMURF2-203ENST00000578386 PRO0461Q9UI25 63 aa6.95□□□□□ -1.3
SMURF2-203ENST00000578386 DNAH10Q8IVF4 4471 aa6.95□□□□□ -1.3
SMURF2-203ENST00000578386 MEGF8Q7Z7M0 2845 aa6.94□□□□□ -1.3
SMURF2-203ENST00000578386 IGKV2-28A0A075B6P5 120 aa6.94□□□□□ -1.3
SMURF2-203ENST00000578386 TRAV10A0A0B4J240 114 aa6.94□□□□□ -1.3
SMURF2-203ENST00000578386 IGKV2D-28P01615 120 aa6.94□□□□□ -1.3
SMURF2-203ENST00000578386 LINC00337Q8N6G1 96 aa6.94□□□□□ -1.3
SMURF2-203ENST00000578386 IGKV2D-24A0A075B6R9 120 aa6.94□□□□□ -1.3
SMURF2-203ENST00000578386 H3BNG1 76 aa6.94□□□□□ -1.3
SMURF2-203ENST00000578386 LINC00588Q9Y4M8 146 aa6.94□□□□□ -1.3
SMURF2-203ENST00000578386 IBA57-AS1B1ANH7 110 aa6.93□□□□□ -1.3
SMURF2-203ENST00000578386 C9JAW5 83 aa6.93□□□□□ -1.3
SMURF2-203ENST00000578386 OR13C6PQ8NH95 151 aa6.92□□□□□ -1.3
SMURF2-203ENST00000578386 DNAH1Q9P2D7 4330 aa6.92□□□□□ -1.3
SMURF2-203ENST00000578386 Q8NDZ9 215 aa6.92□□□□□ -1.3
SMURF2-203ENST00000578386 F8W1H4 67 aa6.91□□□□□ -1.3
SMURF2-203ENST00000578386 PLECQ15149 4684 aaKnown RBP6.91□□□□□ -1.3
SMURF2-203ENST00000578386 TRBV30A0A0K0K1B3 111 aa6.9□□□□□ -1.3
SMURF2-203ENST00000578386 CASC10Q5T4H9 136 aa6.9□□□□□ -1.3
SMURF2-203ENST00000578386 LECT2O14960 151 aa6.9□□□□□ -1.3
SMURF2-203ENST00000578386 KRTAP26-1Q6PEX3 210 aa6.9□□□□□ -1.3
SMURF2-203ENST00000578386 XAGE1AQ9HD64 81 aa6.9□□□□□ -1.3
SMURF2-203ENST00000578386 LYRM7Q5U5X0 104 aa6.9□□□□□ -1.31
SMURF2-203ENST00000578386 TGP01266 2768 aa6.89□□□□□ -1.31
SMURF2-203ENST00000578386 C1orf43Q9BWL3 253 aa6.89□□□□□ -1.31
SMURF2-203ENST00000578386 DYNC2H1Q8NCM8 4307 aaKnown RBP6.89□□□□□ -1.31
SMURF2-203ENST00000578386 TRBV20-1A0A075B6N2 111 aa6.88□□□□□ -1.31
SMURF2-203ENST00000578386 NCR3O14931 201 aa6.88□□□□□ -1.31
SMURF2-203ENST00000578386 LINC01556Q5JQF7 62 aa6.88□□□□□ -1.31
SMURF2-203ENST00000578386 C6orf48Q9UBA6 75 aa6.88□□□□□ -1.31
SMURF2-203ENST00000578386 KLK5Q9Y337 293 aaPredicted RBP6.88□□□□□ -1.31
SMURF2-203ENST00000578386 ZNF561-AS1K7EIQ3 104 aa6.88□□□□□ -1.31
SMURF2-203ENST00000578386 SLC25A20O43772 301 aa6.88□□□□□ -1.31
SMURF2-203ENST00000578386 COX6CP09669 75 aa6.88□□□□□ -1.31
SMURF2-203ENST00000578386 LINC01620Q4KN68 170 aa6.88□□□□□ -1.31
SMURF2-203ENST00000578386 FAM218AQ96MZ4 157 aa6.88□□□□□ -1.31
SMURF2-203ENST00000578386 TRAV8-4A0A0B4J246 113 aa6.87□□□□□ -1.31
SMURF2-203ENST00000578386 C15orf56Q8N910 161 aa6.87□□□□□ -1.31
SMURF2-203ENST00000578386 SMIM11BQ8TCY0 68 aa6.87□□□□□ -1.31
SMURF2-203ENST00000578386 VPS25Q9BRG1 176 aa6.87□□□□□ -1.31
SMURF2-203ENST00000578386 ATXN8Q156A1 80 aa6.87□□□□□ -1.31
SMURF2-203ENST00000578386 COPS9Q8WXC6 57 aa6.87□□□□□ -1.31
SMURF2-203ENST00000578386 K7ERU9 68 aa6.87□□□□□ -1.31
SMURF2-203ENST00000578386 LINC01561Q8N1V8 128 aa6.87□□□□□ -1.31
SMURF2-203ENST00000578386 CAMK2N2Q96S95 79 aa6.87□□□□□ -1.31
SMURF2-203ENST00000578386 Q6ZRU5 148 aa6.86□□□□□ -1.31
SMURF2-203ENST00000578386 ANKRD29Q8N6D5 301 aa6.86□□□□□ -1.31
SMURF2-203ENST00000578386 C15orf53Q8NAA6 179 aa6.86□□□□□ -1.31
SMURF2-203ENST00000578386 NTN5Q8WTR8 489 aaPredicted RBP6.86□□□□□ -1.31
SMURF2-203ENST00000578386 STARD9Q9P2P6 4700 aa6.86□□□□□ -1.31
SMURF2-203ENST00000578386 DNAH10OSP0CZ25 163 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms