RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 X6R8D5 127 aa9.75□□□□□ -0.85
RNF43-202ENST00000577625 CMYA5Q8N3K9 4069 aa9.75□□□□□ -0.85
RNF43-202ENST00000577625 IGHV1-58A0A0C4DH39 117 aa9.75□□□□□ -0.85
RNF43-202ENST00000577625 K7EQD1 137 aa9.75□□□□□ -0.85
RNF43-202ENST00000577625 TIRAPP58753 221 aa9.75□□□□□ -0.85
RNF43-202ENST00000577625 TRGV2A0A075B6R0 118 aa9.74□□□□□ -0.85
RNF43-202ENST00000577625 OXLD1Q5BKU9 147 aa9.74□□□□□ -0.85
RNF43-202ENST00000577625 FAM222AQ5U5X8 452 aa9.74□□□□□ -0.85
RNF43-202ENST00000577625 IGLV4-3A0A075B6K6 122 aa9.74□□□□□ -0.85
RNF43-202ENST00000577625 NPC2P61916 151 aa9.74□□□□□ -0.85
RNF43-202ENST00000577625 PYGO1Q9Y3Y4 419 aa9.74□□□□□ -0.85
RNF43-202ENST00000577625 BAALC-AS2P0C853 105 aa9.73□□□□□ -0.85
RNF43-202ENST00000577625 APOC4P55056 127 aa9.73□□□□□ -0.85
RNF43-202ENST00000577625 CHCHD7Q9BUK0 85 aa9.73□□□□□ -0.85
RNF43-202ENST00000577625 MRPS36P82909 103 aaKnown RBP9.73□□□□□ -0.85
RNF43-202ENST00000577625 RPL36AP83881 106 aaKnown RBP9.73□□□□□ -0.85
RNF43-202ENST00000577625 DEFB135Q30KP9 77 aa9.73□□□□□ -0.85
RNF43-202ENST00000577625 RPL36ALQ969Q0 106 aaKnown RBP9.73□□□□□ -0.85
RNF43-202ENST00000577625 IGHV3-38A0A0C4DH36 116 aa9.72□□□□□ -0.85
RNF43-202ENST00000577625 IGHV4-30-4P0DP06 118 aa9.72□□□□□ -0.85
RNF43-202ENST00000577625 MALP21145 153 aa9.71□□□□□ -0.85
RNF43-202ENST00000577625 LINC00612Q8N6U2 182 aa9.71□□□□□ -0.85
RNF43-202ENST00000577625 TRBV6-4A0A1B0GX49 114 aa9.71□□□□□ -0.86
RNF43-202ENST00000577625 KRTAP10-11P60412 298 aa9.71□□□□□ -0.86
RNF43-202ENST00000577625 VSIG2Q96IQ7 327 aa9.71□□□□□ -0.86
RNF43-202ENST00000577625 NDUFC2-KCTD14E9PQ53 114 aa9.7□□□□□ -0.86
RNF43-202ENST00000577625 Q6JHZ5 121 aa9.7□□□□□ -0.86
RNF43-202ENST00000577625 PRO0628Q9UI54 55 aa9.7□□□□□ -0.86
RNF43-202ENST00000577625 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
RNF43-202ENST00000577625 EGFEM1PQ0D2K5 195 aa9.7□□□□□ -0.86
RNF43-202ENST00000577625 NOTCH1P46531 2555 aa9.69□□□□□ -0.86
RNF43-202ENST00000577625 FAM104AQ969W3 186 aa9.69□□□□□ -0.86
RNF43-202ENST00000577625 UBE2D4Q9Y2X8 147 aa9.69□□□□□ -0.86
RNF43-202ENST00000577625 TRGV4A0A0C4DH28 118 aa9.68□□□□□ -0.86
RNF43-202ENST00000577625 F8WDY8 70 aa9.68□□□□□ -0.86
RNF43-202ENST00000577625 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.68□□□□□ -0.86
RNF43-202ENST00000577625 IGKV2-29A2NJV5 120 aaPredicted RBP9.68□□□□□ -0.86
RNF43-202ENST00000577625 FHL2Q14192 279 aa9.68□□□□□ -0.86
RNF43-202ENST00000577625 DEFB130BP0DP73 79 aa9.67□□□□□ -0.86
RNF43-202ENST00000577625 DEFB130AP0DP74 79 aa9.67□□□□□ -0.86
RNF43-202ENST00000577625 USP17L23D6RBM5 183 aa9.67□□□□□ -0.86
RNF43-202ENST00000577625 NDUFC2O95298 119 aa9.67□□□□□ -0.86
RNF43-202ENST00000577625 CIRBPQ14011 172 aaKnown RBP9.67□□□□□ -0.86
RNF43-202ENST00000577625 TINCRA0A1B0GVN0 87 aa9.66□□□□□ -0.86
RNF43-202ENST00000577625 DNAL4O96015 105 aa9.66□□□□□ -0.86
RNF43-202ENST00000577625 COPS9Q8WXC6 57 aa9.66□□□□□ -0.86
RNF43-202ENST00000577625 IGHV4-28A0A0C4DH34 117 aa9.65□□□□□ -0.86
RNF43-202ENST00000577625 LOC100131303A0A0U1RQF7 123 aa9.65□□□□□ -0.86
RNF43-202ENST00000577625 LYRM9A8MSI8 78 aa9.65□□□□□ -0.86
RNF43-202ENST00000577625 NTM-AS1Q6ZSK4 140 aa9.65□□□□□ -0.86
RNF43-202ENST00000577625 ANK2Q01484 3957 aa9.65□□□□□ -0.86
RNF43-202ENST00000577625 DNAH3Q8TD57 4116 aa9.65□□□□□ -0.86
RNF43-202ENST00000577625 PFN2P35080 140 aa9.65□□□□□ -0.86
RNF43-202ENST00000577625 Q8NAQ8 132 aa9.65□□□□□ -0.86
RNF43-202ENST00000577625 LINC00308Q8TCZ7 52 aa9.65□□□□□ -0.86
RNF43-202ENST00000577625 NBEAL1Q6ZS30 2694 aa9.65□□□□□ -0.87
RNF43-202ENST00000577625 IGKV3D-7A0A0C4DH55 119 aa9.64□□□□□ -0.87
RNF43-202ENST00000577625 NDUFA1O15239 70 aa9.64□□□□□ -0.87
RNF43-202ENST00000577625 DEFB4AO15263 64 aa9.64□□□□□ -0.87
RNF43-202ENST00000577625 LINC01561Q8N1V8 128 aa9.64□□□□□ -0.87
RNF43-202ENST00000577625 A8MZ25 164 aa9.64□□□□□ -0.87
RNF43-202ENST00000577625 MIFP14174 115 aa9.64□□□□□ -0.87
RNF43-202ENST00000577625 RNASE13Q5GAN3 156 aaKnown RBP9.62□□□□□ -0.87
RNF43-202ENST00000577625 A0A087WVE0 104 aa9.61□□□□□ -0.87
RNF43-202ENST00000577625 DGAT2L7PQ6IED9 249 aa9.61□□□□□ -0.87
RNF43-202ENST00000577625 FAM218AQ96MZ4 157 aa9.61□□□□□ -0.87
RNF43-202ENST00000577625 EPM2AB3EWF7 344 aa9.61□□□□□ -0.87
RNF43-202ENST00000577625 CELA1Q9UNI1 258 aa9.61□□□□□ -0.87
RNF43-202ENST00000577625 TMEM243Q9BU79 118 aa9.6□□□□□ -0.87
RNF43-202ENST00000577625 TENM3Q9P273 2699 aa9.6□□□□□ -0.87
RNF43-202ENST00000577625 LINC00336Q6ZUF6 198 aa9.6□□□□□ -0.87
RNF43-202ENST00000577625 LINC00846Q9NV44 126 aa9.6□□□□□ -0.87
RNF43-202ENST00000577625 PRO0255Q9UI72 69 aa9.6□□□□□ -0.87
RNF43-202ENST00000577625 MGAM2Q2M2H8 2515 aa9.59□□□□□ -0.87
RNF43-202ENST00000577625 C1orf43Q9BWL3 253 aa9.59□□□□□ -0.87
RNF43-202ENST00000577625 SERP1Q9Y6X1 66 aa9.59□□□□□ -0.87
RNF43-202ENST00000577625 FAM236DA0A1B0GTK5 79 aa9.58□□□□□ -0.88
RNF43-202ENST00000577625 FAM236CP0DP71 79 aa9.58□□□□□ -0.88
RNF43-202ENST00000577625 DAD1P61803 113 aa9.58□□□□□ -0.88
RNF43-202ENST00000577625 UBE2L6O14933 153 aa9.58□□□□□ -0.88
RNF43-202ENST00000577625 OBSCN-AS1Q96MR7 158 aa9.58□□□□□ -0.88
RNF43-202ENST00000577625 RETNQ9HD89 108 aa9.58□□□□□ -0.88
RNF43-202ENST00000577625 TRBV6-8A0A0A6YYG3 113 aa9.57□□□□□ -0.88
RNF43-202ENST00000577625 GYPEP15421 78 aa9.57□□□□□ -0.88
RNF43-202ENST00000577625 Q9HAA7 133 aa9.57□□□□□ -0.88
RNF43-202ENST00000577625 C14orf132Q9NPU4 83 aa9.57□□□□□ -0.88
RNF43-202ENST00000577625 CDC42SE2Q9NRR3 84 aa9.57□□□□□ -0.88
RNF43-202ENST00000577625 SPART-AS1P0CW21 52 aa9.56□□□□□ -0.88
RNF43-202ENST00000577625 SOSTDC1Q6X4U4 206 aa9.56□□□□□ -0.88
RNF43-202ENST00000577625 IGLV5-45A0A087WSX0 123 aa9.56□□□□□ -0.88
RNF43-202ENST00000577625 RPL28P46779 137 aaKnown RBP9.56□□□□□ -0.88
RNF43-202ENST00000577625 FAM19A3Q7Z5A8 133 aa9.56□□□□□ -0.88
RNF43-202ENST00000577625 Q9H8V8 135 aa9.56□□□□□ -0.88
RNF43-202ENST00000577625 GHRHP01286 108 aa9.55□□□□□ -0.88
RNF43-202ENST00000577625 PAX4O43316 350 aa9.54□□□□□ -0.88
RNF43-202ENST00000577625 CDKN2A-AS1Q9UH64 79 aa9.54□□□□□ -0.88
RNF43-202ENST00000577625 S100A7L2Q5SY68 101 aa9.53□□□□□ -0.88
RNF43-202ENST00000577625 LINC00242Q5T6M2 205 aa9.53□□□□□ -0.88
RNF43-202ENST00000577625 ATP5EP2Q5VTU8 51 aa9.53□□□□□ -0.88
RNF43-202ENST00000577625 TRAV13-2A0A0B4J235 113 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms