RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 CELA1Q9UNI1 258 aa9.73□□□□□ -0.85
RAB40B-211ENST00000576359 A0A1B0GUV1 79 aa9.72□□□□□ -0.85
RAB40B-211ENST00000576359 Q8NAQ8 132 aa9.72□□□□□ -0.85
RAB40B-211ENST00000576359 SND1-IT1Q9HBX3 110 aa9.72□□□□□ -0.85
RAB40B-211ENST00000576359 TRAV8-4A0A0B4J246 113 aa9.72□□□□□ -0.85
RAB40B-211ENST00000576359 XCL1P47992 114 aa9.72□□□□□ -0.85
RAB40B-211ENST00000576359 TRAV13-2A0A0B4J235 113 aa9.71□□□□□ -0.85
RAB40B-211ENST00000576359 CLPSL2Q6UWE3 100 aa9.71□□□□□ -0.85
RAB40B-211ENST00000576359 WFDC9Q8NEX5 89 aa9.71□□□□□ -0.85
RAB40B-211ENST00000576359 IGKV2-28A0A075B6P5 120 aa9.71□□□□□ -0.86
RAB40B-211ENST00000576359 IGKV2D-28P01615 120 aa9.71□□□□□ -0.86
RAB40B-211ENST00000576359 LINC00337Q8N6G1 96 aa9.71□□□□□ -0.86
RAB40B-211ENST00000576359 IBA57-AS1B1ANH7 110 aa9.7□□□□□ -0.86
RAB40B-211ENST00000576359 CRPP02741 224 aa9.7□□□□□ -0.86
RAB40B-211ENST00000576359 PFN2P35080 140 aa9.7□□□□□ -0.86
RAB40B-211ENST00000576359 SS18Q15532 418 aa9.7□□□□□ -0.86
RAB40B-211ENST00000576359 C11orf68Q9H3H3 251 aaKnown RBP9.7□□□□□ -0.86
RAB40B-211ENST00000576359 CCL18P55774 89 aa9.7□□□□□ -0.86
RAB40B-211ENST00000576359 DAD1P61803 113 aa9.7□□□□□ -0.86
RAB40B-211ENST00000576359 IGHV4-30-4P0DP06 118 aa9.69□□□□□ -0.86
RAB40B-211ENST00000576359 C6orf226Q5I0X4 101 aa9.69□□□□□ -0.86
RAB40B-211ENST00000576359 WIPF1O43516 503 aa9.68□□□□□ -0.86
RAB40B-211ENST00000576359 Q8N3U1 123 aa9.68□□□□□ -0.86
RAB40B-211ENST00000576359 FAM218AQ96MZ4 157 aa9.68□□□□□ -0.86
RAB40B-211ENST00000576359 TRACP01848 142 aa9.67□□□□□ -0.86
RAB40B-211ENST00000576359 MIFP14174 115 aa9.67□□□□□ -0.86
RAB40B-211ENST00000576359 RPL28P46779 137 aaKnown RBP9.67□□□□□ -0.86
RAB40B-211ENST00000576359 DEFB121Q5J5C9 76 aa9.67□□□□□ -0.86
RAB40B-211ENST00000576359 ATP5G1P05496 136 aa9.65□□□□□ -0.86
RAB40B-211ENST00000576359 LINC00269Q8N2A0 174 aa9.65□□□□□ -0.86
RAB40B-211ENST00000576359 SNCGO76070 127 aa9.65□□□□□ -0.86
RAB40B-211ENST00000576359 NHLRC4P0CG21 123 aaPredicted RBP9.65□□□□□ -0.86
RAB40B-211ENST00000576359 Q8IZM0 81 aa9.65□□□□□ -0.86
RAB40B-211ENST00000576359 SMIM11BQ8TCY0 68 aa9.64□□□□□ -0.87
RAB40B-211ENST00000576359 CCDC179H3BU77 68 aa9.64□□□□□ -0.87
RAB40B-211ENST00000576359 BAALC-AS2P0C853 105 aa9.64□□□□□ -0.87
RAB40B-211ENST00000576359 HTN3P15516 51 aa9.63□□□□□ -0.87
RAB40B-211ENST00000576359 C15orf53Q8NAA6 179 aa9.63□□□□□ -0.87
RAB40B-211ENST00000576359 SPART-AS1P0CW21 52 aa9.63□□□□□ -0.87
RAB40B-211ENST00000576359 FAM240AA0A1B0GVK7 77 aa9.62□□□□□ -0.87
RAB40B-211ENST00000576359 ANGP03950 147 aaKnown RBP9.62□□□□□ -0.87
RAB40B-211ENST00000576359 LINC01561Q8N1V8 128 aa9.62□□□□□ -0.87
RAB40B-211ENST00000576359 Q9HAA7 133 aa9.62□□□□□ -0.87
RAB40B-211ENST00000576359 IGLV10-54A0A075B6I4 117 aa9.62□□□□□ -0.87
RAB40B-211ENST00000576359 CD164L2Q6UWJ8 174 aa9.62□□□□□ -0.87
RAB40B-211ENST00000576359 NDUFV3P56181 108 aaKnown RBP9.61□□□□□ -0.87
RAB40B-211ENST00000576359 CHCHD10Q8WYQ3 142 aaPredicted RBP9.61□□□□□ -0.87
RAB40B-211ENST00000576359 C22orf24Q9Y442 160 aa9.61□□□□□ -0.87
RAB40B-211ENST00000576359 REG3AQ06141 175 aa9.61□□□□□ -0.87
RAB40B-211ENST00000576359 GAGE2BQ13066 116 aa9.61□□□□□ -0.87
RAB40B-211ENST00000576359 GAGE2EQ4V326 116 aa9.61□□□□□ -0.87
RAB40B-211ENST00000576359 GAGE2DQ9UEU5 116 aa9.61□□□□□ -0.87
RAB40B-211ENST00000576359 OR13C6PQ8NH95 151 aa9.6□□□□□ -0.87
RAB40B-211ENST00000576359 KRTAP10-11P60412 298 aa9.6□□□□□ -0.87
RAB40B-211ENST00000576359 KIAA0087Q14695 138 aa9.6□□□□□ -0.87
RAB40B-211ENST00000576359 TTC32Q5I0X7 151 aa9.6□□□□□ -0.87
RAB40B-211ENST00000576359 A0A087WYN8 130 aa9.59□□□□□ -0.87
RAB40B-211ENST00000576359 MRPL23Q16540 153 aaKnown RBP9.59□□□□□ -0.87
RAB40B-211ENST00000576359 F8P00451 2351 aa9.59□□□□□ -0.87
RAB40B-211ENST00000576359 RETNQ9HD89 108 aa9.58□□□□□ -0.88
RAB40B-211ENST00000576359 CMYA5Q8N3K9 4069 aa9.58□□□□□ -0.88
RAB40B-211ENST00000576359 FBN1P35555 2871 aaKnown RBP9.58□□□□□ -0.88
RAB40B-211ENST00000576359 H0YGX0 51 aa9.58□□□□□ -0.88
RAB40B-211ENST00000576359 MALP21145 153 aa9.58□□□□□ -0.88
RAB40B-211ENST00000576359 DNAL4O96015 105 aa9.57□□□□□ -0.88
RAB40B-211ENST00000576359 LELP1Q5T871 98 aa9.57□□□□□ -0.88
RAB40B-211ENST00000576359 KRTAP24-1Q3LI83 254 aa9.57□□□□□ -0.88
RAB40B-211ENST00000576359 ANK2Q01484 3957 aa9.56□□□□□ -0.88
RAB40B-211ENST00000576359 CXCL5P42830 114 aa9.56□□□□□ -0.88
RAB40B-211ENST00000576359 Q6Q795 121 aa9.56□□□□□ -0.88
RAB40B-211ENST00000576359 ACYP1P07311 99 aa9.55□□□□□ -0.88
RAB40B-211ENST00000576359 PRR3P79522 188 aaKnown RBP9.55□□□□□ -0.88
RAB40B-211ENST00000576359 C9orf116Q5BN46 136 aaPredicted RBP9.55□□□□□ -0.88
RAB40B-211ENST00000576359 COX17Q14061 63 aa9.54□□□□□ -0.88
RAB40B-211ENST00000576359 LECT2O14960 151 aa9.54□□□□□ -0.88
RAB40B-211ENST00000576359 PKD1L1Q8TDX9 2849 aa9.53□□□□□ -0.88
RAB40B-211ENST00000576359 INAFM2P0DMQ5 153 aa9.52□□□□□ -0.88
RAB40B-211ENST00000576359 LYPD5Q6UWN5 251 aa9.52□□□□□ -0.88
RAB40B-211ENST00000576359 PRR34Q9NV39 138 aa9.52□□□□□ -0.88
RAB40B-211ENST00000576359 EGFEM1PQ0D2K5 195 aa9.52□□□□□ -0.89
RAB40B-211ENST00000576359 KLK12Q9UKR0 248 aa9.52□□□□□ -0.89
RAB40B-211ENST00000576359 NDUFC2O95298 119 aa9.51□□□□□ -0.89
RAB40B-211ENST00000576359 NANOS2P60321 138 aaKnown RBP9.51□□□□□ -0.89
RAB40B-211ENST00000576359 ENHOQ6UWT2 76 aa9.51□□□□□ -0.89
RAB40B-211ENST00000576359 C9orf129Q5T035 196 aaKnown RBP9.51□□□□□ -0.89
RAB40B-211ENST00000576359 C6orf223Q8N319 242 aa9.51□□□□□ -0.89
RAB40B-211ENST00000576359 SMCR5Q8TEV8 140 aa9.51□□□□□ -0.89
RAB40B-211ENST00000576359 KLK5Q9Y337 293 aaPredicted RBP9.5□□□□□ -0.89
RAB40B-211ENST00000576359 SLPIP03973 132 aa9.5□□□□□ -0.89
RAB40B-211ENST00000576359 SPAG11BQ08648 103 aa9.5□□□□□ -0.89
RAB40B-211ENST00000576359 C5orf47Q569G3 176 aa9.5□□□□□ -0.89
RAB40B-211ENST00000576359 C10orf25Q5T742 122 aa9.5□□□□□ -0.89
RAB40B-211ENST00000576359 LINC00526Q96FQ7 95 aa9.5□□□□□ -0.89
RAB40B-211ENST00000576359 GAGE2AQ6NT46 116 aa9.49□□□□□ -0.89
RAB40B-211ENST00000576359 UNQ6190/PRO20217Q6UXQ8 127 aa9.49□□□□□ -0.89
RAB40B-211ENST00000576359 Q6ZTC4 211 aa9.49□□□□□ -0.89
RAB40B-211ENST00000576359 Q8NDZ9 215 aa9.49□□□□□ -0.89
RAB40B-211ENST00000576359 TMEM126AQ9H061 195 aa9.49□□□□□ -0.89
RAB40B-211ENST00000576359 DNAH3Q8TD57 4116 aa9.48□□□□□ -0.89
RAB40B-211ENST00000576359 TRBV7-7A0A0K0K1E9 115 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms