RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SEC11AP67812 179 aa5.19□□□□□ -1.58
CCDC40-215ENST00000576033 TAL2Q16559 108 aa5.19□□□□□ -1.58
CCDC40-215ENST00000576033 COL5A1-AS1Q5SY13 56 aa5.19□□□□□ -1.58
CCDC40-215ENST00000576033 TMEM170BQ5T4T1 132 aa5.19□□□□□ -1.58
CCDC40-215ENST00000576033 DGAT2L7PQ6IED9 249 aa5.19□□□□□ -1.58
CCDC40-215ENST00000576033 C1orf43Q9BWL3 253 aa5.19□□□□□ -1.58
CCDC40-215ENST00000576033 IGHV1-58A0A0C4DH39 117 aa5.18□□□□□ -1.58
CCDC40-215ENST00000576033 GAGE12HA6NDE8 117 aa5.18□□□□□ -1.58
CCDC40-215ENST00000576033 J3QQQ9 107 aa5.18□□□□□ -1.58
CCDC40-215ENST00000576033 HERVK_113P63121 156 aa5.18□□□□□ -1.58
CCDC40-215ENST00000576033 COX6A2Q02221 97 aa5.18□□□□□ -1.58
CCDC40-215ENST00000576033 MIAQ16674 131 aa5.18□□□□□ -1.58
CCDC40-215ENST00000576033 PLEKHB2Q96CS7 222 aa5.18□□□□□ -1.58
CCDC40-215ENST00000576033 TMEM101Q96IK0 257 aa5.18□□□□□ -1.58
CCDC40-215ENST00000576033 TM2D2Q9BX73 214 aa5.18□□□□□ -1.58
CCDC40-215ENST00000576033 RYR1P21817 5038 aa5.17□□□□□ -1.58
CCDC40-215ENST00000576033 ZNF815PA8K554 130 aa5.17□□□□□ -1.58
CCDC40-215ENST00000576033 USP17L23D6RBM5 183 aa5.17□□□□□ -1.58
CCDC40-215ENST00000576033 XCL1P47992 114 aa5.17□□□□□ -1.58
CCDC40-215ENST00000576033 C15orf56Q8N910 161 aa5.17□□□□□ -1.58
CCDC40-215ENST00000576033 ORAOV1Q8WV07 137 aa5.17□□□□□ -1.58
CCDC40-215ENST00000576033 CHCHD10Q8WYQ3 142 aaPredicted RBP5.17□□□□□ -1.58
CCDC40-215ENST00000576033 SPANXB1Q9NS25 103 aaPredicted RBP5.17□□□□□ -1.58
CCDC40-215ENST00000576033 CDKN2A-AS1Q9UH64 79 aa5.17□□□□□ -1.58
CCDC40-215ENST00000576033 IGLV5-52A0A0A0MRZ9 124 aa5.16□□□□□ -1.58
CCDC40-215ENST00000576033 LINC00959A0A1B0GUT2 108 aa5.16□□□□□ -1.58
CCDC40-215ENST00000576033 A0A1B0GV90 55 aa5.16□□□□□ -1.58
CCDC40-215ENST00000576033 SMIM1B2RUZ4 78 aa5.16□□□□□ -1.58
CCDC40-215ENST00000576033 CCL25O15444 150 aa5.16□□□□□ -1.58
CCDC40-215ENST00000576033 FOXI1Q12951 378 aa5.16□□□□□ -1.58
CCDC40-215ENST00000576033 HIGD2BQ4VC39 106 aa5.16□□□□□ -1.58
CCDC40-215ENST00000576033 LINC00469Q8N7U9 141 aa5.16□□□□□ -1.58
CCDC40-215ENST00000576033 LINC00526Q96FQ7 95 aa5.16□□□□□ -1.58
CCDC40-215ENST00000576033 GEMIN7Q9H840 131 aaKnown RBP5.16□□□□□ -1.58
CCDC40-215ENST00000576033 TRAV13-1A0A0B4J241 112 aa5.15□□□□□ -1.59
CCDC40-215ENST00000576033 IGHV3OR16-9A0A0B4J2B5 98 aa5.15□□□□□ -1.59
CCDC40-215ENST00000576033 A0A1B0GWB2 263 aa5.15□□□□□ -1.59
CCDC40-215ENST00000576033 H3BRM9 83 aa5.15□□□□□ -1.59
CCDC40-215ENST00000576033 TAX1BP3O14907 124 aa5.15□□□□□ -1.59
CCDC40-215ENST00000576033 SLPIP03973 132 aa5.15□□□□□ -1.59
CCDC40-215ENST00000576033 LGALS3P17931 250 aaKnown RBP5.15□□□□□ -1.59
CCDC40-215ENST00000576033 FXYD2P54710 66 aa5.15□□□□□ -1.59
CCDC40-215ENST00000576033 BATFQ16520 125 aa5.15□□□□□ -1.59
CCDC40-215ENST00000576033 CEND1Q8N111 149 aa5.15□□□□□ -1.59
CCDC40-215ENST00000576033 RMI2Q96E14 147 aa5.15□□□□□ -1.59
CCDC40-215ENST00000576033 LITAFQ99732 161 aa5.15□□□□□ -1.59
CCDC40-215ENST00000576033 FAM30AQ9NZY2 134 aa5.15□□□□□ -1.59
CCDC40-215ENST00000576033 SPINK8P0C7L1 97 aa5.14□□□□□ -1.59
CCDC40-215ENST00000576033 LINC01561Q8N1V8 128 aa5.14□□□□□ -1.59
CCDC40-215ENST00000576033 A0A087WZ39 114 aa5.13□□□□□ -1.59
CCDC40-215ENST00000576033 A0A0J9YXY3 114 aa5.13□□□□□ -1.59
CCDC40-215ENST00000576033 PANO1I0J062 215 aa5.13□□□□□ -1.59
CCDC40-215ENST00000576033 NDUFA1O15239 70 aa5.13□□□□□ -1.59
CCDC40-215ENST00000576033 TIMM17BO60830 172 aa5.13□□□□□ -1.59
CCDC40-215ENST00000576033 C5orf38Q86SI9 138 aa5.13□□□□□ -1.59
CCDC40-215ENST00000576033 ZNF625Q96I27 306 aaPredicted RBP5.13□□□□□ -1.59
CCDC40-215ENST00000576033 NDUFA12Q9UI09 145 aa5.13□□□□□ -1.59
CCDC40-215ENST00000576033 COX11Q9Y6N1 276 aa5.13□□□□□ -1.59
CCDC40-215ENST00000576033 VPS13BQ7Z7G8 4022 aa5.12□□□□□ -1.59
CCDC40-215ENST00000576033 IGHV3-64A0A075B6Q5 118 aa5.12□□□□□ -1.59
CCDC40-215ENST00000576033 TRAV8-4A0A0B4J246 113 aa5.12□□□□□ -1.59
CCDC40-215ENST00000576033 A6NDN8 102 aa5.12□□□□□ -1.59
CCDC40-215ENST00000576033 GCSHP23434 173 aa5.12□□□□□ -1.59
CCDC40-215ENST00000576033 KRTAP4-5Q9BYR2 181 aa5.12□□□□□ -1.59
CCDC40-215ENST00000576033 PTTG1IPP53801 180 aa5.11□□□□□ -1.59
CCDC40-215ENST00000576033 XGP55808 180 aa5.11□□□□□ -1.59
CCDC40-215ENST00000576033 SCGB1D4Q6XE38 83 aa5.11□□□□□ -1.59
CCDC40-215ENST00000576033 HIST1H4GQ99525 98 aa5.11□□□□□ -1.59
CCDC40-215ENST00000576033 SPANXDQ9BXN6 97 aa5.11□□□□□ -1.59
CCDC40-215ENST00000576033 PPDPFQ9H3Y8 114 aa5.11□□□□□ -1.59
CCDC40-215ENST00000576033 SPANXCQ9NY87 97 aa5.11□□□□□ -1.59
CCDC40-215ENST00000576033 TMEM238C9JI98 176 aa5.1□□□□□ -1.59
CCDC40-215ENST00000576033 CHTF8P0CG12 524 aa5.1□□□□□ -1.59
CCDC40-215ENST00000576033 SS18Q15532 418 aa5.1□□□□□ -1.59
CCDC40-215ENST00000576033 CD164L2Q6UWJ8 174 aa5.1□□□□□ -1.59
CCDC40-215ENST00000576033 Q6ZVH6 145 aa5.1□□□□□ -1.59
CCDC40-215ENST00000576033 PGPEP1Q9NXJ5 209 aa5.1□□□□□ -1.59
CCDC40-215ENST00000576033 GVQW2A0A096LPI5 108 aaPredicted RBP5.09□□□□□ -1.59
CCDC40-215ENST00000576033 C9orf118A6NHY6 69 aa5.09□□□□□ -1.59
CCDC40-215ENST00000576033 HERV-K104P63124 156 aa5.09□□□□□ -1.59
CCDC40-215ENST00000576033 ADAMTSL4-AS1Q5T5F5 129 aa5.09□□□□□ -1.59
CCDC40-215ENST00000576033 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.09□□□□□ -1.59
CCDC40-215ENST00000576033 ABCA13Q86UQ4 5058 aa5.08□□□□□ -1.6
CCDC40-215ENST00000576033 PKHD1L1Q86WI1 4243 aa5.08□□□□□ -1.6
CCDC40-215ENST00000576033 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
CCDC40-215ENST00000576033 TMEM238LA0A1B0GVL6 79 aa5.08□□□□□ -1.6
CCDC40-215ENST00000576033 A6NJY4 79 aa5.08□□□□□ -1.6
CCDC40-215ENST00000576033 COX7A2LO14548 114 aa5.08□□□□□ -1.6
CCDC40-215ENST00000576033 EIF4EBP3O60516 100 aaPredicted RBP5.08□□□□□ -1.6
CCDC40-215ENST00000576033 SMR3BP02814 79 aaPredicted RBP5.08□□□□□ -1.6
CCDC40-215ENST00000576033 SMIM13P0DJ93 91 aa5.08□□□□□ -1.6
CCDC40-215ENST00000576033 SRSF9Q13242 221 aaKnown RBP eCLIP5.08□□□□□ -1.6
CCDC40-215ENST00000576033 SFTA2Q6UW10 78 aa5.08□□□□□ -1.6
CCDC40-215ENST00000576033 COX7B2Q8TF08 81 aa5.08□□□□□ -1.6
CCDC40-215ENST00000576033 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
CCDC40-215ENST00000576033 NHP2Q9NX24 153 aaKnown RBP5.08□□□□□ -1.6
CCDC40-215ENST00000576033 K7ERJ3 54 aa5.07□□□□□ -1.6
CCDC40-215ENST00000576033 IFITM1P13164 125 aa5.07□□□□□ -1.6
CCDC40-215ENST00000576033 SPAG11BQ08648 103 aa5.07□□□□□ -1.6
CCDC40-215ENST00000576033 KIAA0087Q14695 138 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms