RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 TCL1BO95988 128 aa12.83□□□□□ -0.36
SPNS3-204ENST00000575194 Q8IZM0 81 aa12.83□□□□□ -0.36
SPNS3-204ENST00000575194 PRO0461Q9UI25 63 aa12.83□□□□□ -0.36
SPNS3-204ENST00000575194 DNAH9Q9NYC9 4486 aa12.83□□□□□ -0.36
SPNS3-204ENST00000575194 A0A0U1RRA0 63 aa12.82□□□□□ -0.36
SPNS3-204ENST00000575194 IBA57-AS1B1ANH7 110 aa12.82□□□□□ -0.36
SPNS3-204ENST00000575194 COX7A2LO14548 114 aa12.82□□□□□ -0.36
SPNS3-204ENST00000575194 RPL13AP40429 203 aaKnown RBP12.82□□□□□ -0.36
SPNS3-204ENST00000575194 C6orf226Q5I0X4 101 aa12.82□□□□□ -0.36
SPNS3-204ENST00000575194 CHCHD10Q8WYQ3 142 aaPredicted RBP12.82□□□□□ -0.36
SPNS3-204ENST00000575194 COX6CP09669 75 aa12.81□□□□□ -0.36
SPNS3-204ENST00000575194 WFDC2Q14508 124 aa12.81□□□□□ -0.36
SPNS3-204ENST00000575194 TM2D3Q9BRN9 247 aa12.81□□□□□ -0.36
SPNS3-204ENST00000575194 FBN3Q75N90 2809 aa12.8□□□□□ -0.36
SPNS3-204ENST00000575194 LYPD5Q6UWN5 251 aa12.8□□□□□ -0.36
SPNS3-204ENST00000575194 HUWE1Q7Z6Z7 4374 aaKnown RBP12.8□□□□□ -0.36
SPNS3-204ENST00000575194 ATXN8Q156A1 80 aa12.79□□□□□ -0.36
SPNS3-204ENST00000575194 B9D2Q9BPU9 175 aa12.79□□□□□ -0.36
SPNS3-204ENST00000575194 TRIAP1O43715 76 aa12.79□□□□□ -0.36
SPNS3-204ENST00000575194 CXCL5P42830 114 aa12.79□□□□□ -0.36
SPNS3-204ENST00000575194 LINC00158P58513 81 aa12.79□□□□□ -0.36
SPNS3-204ENST00000575194 SOSTDC1Q6X4U4 206 aa12.79□□□□□ -0.36
SPNS3-204ENST00000575194 Q6ZTC4 211 aa12.79□□□□□ -0.36
SPNS3-204ENST00000575194 A0A0J9YWU9 116 aa12.78□□□□□ -0.36
SPNS3-204ENST00000575194 MALP21145 153 aa12.78□□□□□ -0.36
SPNS3-204ENST00000575194 CFAP161Q6P656 301 aa12.77□□□□□ -0.36
SPNS3-204ENST00000575194 MIR7-3HGQ8N6C7 128 aa12.77□□□□□ -0.36
SPNS3-204ENST00000575194 SPATA25Q9BR10 227 aa12.77□□□□□ -0.36
SPNS3-204ENST00000575194 Q8N3U1 123 aa12.76□□□□□ -0.37
SPNS3-204ENST00000575194 STAB2Q8WWQ8 2551 aa12.76□□□□□ -0.37
SPNS3-204ENST00000575194 CKS1BP61024 79 aa12.76□□□□□ -0.37
SPNS3-204ENST00000575194 RNF151Q2KHN1 245 aa12.76□□□□□ -0.37
SPNS3-204ENST00000575194 MTURNQ8N3F0 131 aa12.76□□□□□ -0.37
SPNS3-204ENST00000575194 C11orf45Q8TAV5 145 aa12.76□□□□□ -0.37
SPNS3-204ENST00000575194 PRR34Q9NV39 138 aa12.76□□□□□ -0.37
SPNS3-204ENST00000575194 J3QR89 54 aa12.75□□□□□ -0.37
SPNS3-204ENST00000575194 IGLV10-54A0A075B6I4 117 aa12.74□□□□□ -0.37
SPNS3-204ENST00000575194 FOXI1Q12951 378 aa12.74□□□□□ -0.37
SPNS3-204ENST00000575194 CBY1Q9Y3M2 126 aa12.74□□□□□ -0.37
SPNS3-204ENST00000575194 TRAV13-2A0A0B4J235 113 aa12.74□□□□□ -0.37
SPNS3-204ENST00000575194 CRPP02741 224 aa12.74□□□□□ -0.37
SPNS3-204ENST00000575194 ETDBQ3ZM63 59 aa12.74□□□□□ -0.37
SPNS3-204ENST00000575194 M0QXV9 152 aa12.73□□□□□ -0.37
SPNS3-204ENST00000575194 KLK12Q9UKR0 248 aa12.73□□□□□ -0.37
SPNS3-204ENST00000575194 DEFB131BA0A096LNP1 70 aa12.72□□□□□ -0.37
SPNS3-204ENST00000575194 TRAV8-4A0A0B4J246 113 aa12.72□□□□□ -0.37
SPNS3-204ENST00000575194 NANOS2P60321 138 aaKnown RBP12.72□□□□□ -0.37
SPNS3-204ENST00000575194 VPS25Q9BRG1 176 aa12.72□□□□□ -0.37
SPNS3-204ENST00000575194 SND1-IT1Q9HBX3 110 aa12.72□□□□□ -0.37
SPNS3-204ENST00000575194 GAGE12HA6NDE8 117 aa12.71□□□□□ -0.37
SPNS3-204ENST00000575194 PFN2P35080 140 aa12.71□□□□□ -0.37
SPNS3-204ENST00000575194 SMCPP49901 116 aaPredicted RBP12.71□□□□□ -0.37
SPNS3-204ENST00000575194 COX17Q14061 63 aa12.71□□□□□ -0.38
SPNS3-204ENST00000575194 KLK5Q9Y337 293 aaPredicted RBP12.71□□□□□ -0.38
SPNS3-204ENST00000575194 C9JAW5 83 aa12.7□□□□□ -0.38
SPNS3-204ENST00000575194 KIAA0087Q14695 138 aa12.7□□□□□ -0.38
SPNS3-204ENST00000575194 LINC01620Q4KN68 170 aa12.7□□□□□ -0.38
SPNS3-204ENST00000575194 SLC25A20O43772 301 aa12.69□□□□□ -0.38
SPNS3-204ENST00000575194 NHLRC4P0CG21 123 aaPredicted RBP12.69□□□□□ -0.38
SPNS3-204ENST00000575194 CCL18P55774 89 aa12.69□□□□□ -0.38
SPNS3-204ENST00000575194 TGP01266 2768 aa12.69□□□□□ -0.38
SPNS3-204ENST00000575194 ENHOQ6UWT2 76 aa12.68□□□□□ -0.38
SPNS3-204ENST00000575194 TEN1Q86WV5 123 aa12.68□□□□□ -0.38
SPNS3-204ENST00000575194 LST1O00453 97 aa12.67□□□□□ -0.38
SPNS3-204ENST00000575194 C2orf82Q6UX34 121 aa12.67□□□□□ -0.38
SPNS3-204ENST00000575194 WFDC10BQ8IUB3 73 aa12.67□□□□□ -0.38
SPNS3-204ENST00000575194 TRAV10A0A0B4J240 114 aa12.66□□□□□ -0.38
SPNS3-204ENST00000575194 SPAG11BQ08648 103 aa12.66□□□□□ -0.38
SPNS3-204ENST00000575194 MUC7Q8TAX7 377 aa12.66□□□□□ -0.38
SPNS3-204ENST00000575194 UBE2WQ96B02 151 aa12.66□□□□□ -0.38
SPNS3-204ENST00000575194 TRBV10-2A0A0K0K1G8 114 aa12.65□□□□□ -0.38
SPNS3-204ENST00000575194 LINC01600Q96MT4 127 aa12.65□□□□□ -0.38
SPNS3-204ENST00000575194 C15orf53Q8NAA6 179 aa12.65□□□□□ -0.38
SPNS3-204ENST00000575194 ESRGQ1W209 222 aa12.64□□□□□ -0.39
SPNS3-204ENST00000575194 ANKRD29Q8N6D5 301 aa12.64□□□□□ -0.39
SPNS3-204ENST00000575194 PPDPFLQ8WWR9 84 aa12.64□□□□□ -0.39
SPNS3-204ENST00000575194 IGKV2-28A0A075B6P5 120 aa12.63□□□□□ -0.39
SPNS3-204ENST00000575194 IGKV2D-28P01615 120 aa12.63□□□□□ -0.39
SPNS3-204ENST00000575194 CLEC2BQ92478 149 aa12.63□□□□□ -0.39
SPNS3-204ENST00000575194 LINC00337Q8N6G1 96 aa12.62□□□□□ -0.39
SPNS3-204ENST00000575194 H3BT86 120 aa12.62□□□□□ -0.39
SPNS3-204ENST00000575194 RPL28P46779 137 aaKnown RBP12.62□□□□□ -0.39
SPNS3-204ENST00000575194 LINC01556Q5JQF7 62 aa12.62□□□□□ -0.39
SPNS3-204ENST00000575194 NDUFC2O95298 119 aa12.59□□□□□ -0.39
SPNS3-204ENST00000575194 GVQW2A0A096LPI5 108 aaPredicted RBP12.57□□□□□ -0.4
SPNS3-204ENST00000575194 TRACP01848 142 aa12.57□□□□□ -0.4
SPNS3-204ENST00000575194 CARD19Q96LW7 228 aa12.57□□□□□ -0.4
SPNS3-204ENST00000575194 UNQ6190/PRO20217Q6UXQ8 127 aa12.55□□□□□ -0.4
SPNS3-204ENST00000575194 OR13C6PQ8NH95 151 aa12.55□□□□□ -0.4
SPNS3-204ENST00000575194 NTN5Q8WTR8 489 aaPredicted RBP12.55□□□□□ -0.4
SPNS3-204ENST00000575194 C1orf43Q9BWL3 253 aa12.55□□□□□ -0.4
SPNS3-204ENST00000575194 DNAH10OSP0CZ25 163 aa12.54□□□□□ -0.4
SPNS3-204ENST00000575194 C6orf223Q8N319 242 aa12.54□□□□□ -0.4
SPNS3-204ENST00000575194 SMIM11BQ8TCY0 68 aa12.54□□□□□ -0.4
SPNS3-204ENST00000575194 H0YGX0 51 aa12.54□□□□□ -0.4
SPNS3-204ENST00000575194 C9orf116Q5BN46 136 aaPredicted RBP12.54□□□□□ -0.4
SPNS3-204ENST00000575194 ZNF561-AS1K7EIQ3 104 aa12.53□□□□□ -0.4
SPNS3-204ENST00000575194 KRTAP26-1Q6PEX3 210 aa12.53□□□□□ -0.4
SPNS3-204ENST00000575194 DNAH7Q8WXX0 4024 aa12.53□□□□□ -0.4
SPNS3-204ENST00000575194 C10orf25Q5T742 122 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms