RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 LINC01549A6NIU2 74 aa12.08□□□□□ -0.48
SCARF1-208ENST00000574545 KRTAP10-8P60410 259 aa12.08□□□□□ -0.48
SCARF1-208ENST00000574545 FABP9Q0Z7S8 132 aa12.08□□□□□ -0.48
SCARF1-208ENST00000574545 PACRGQ96M98 296 aaPredicted RBP12.08□□□□□ -0.48
SCARF1-208ENST00000574545 C9orf129Q5T035 196 aaKnown RBP12.07□□□□□ -0.48
SCARF1-208ENST00000574545 TOMM7Q9P0U1 55 aa12.07□□□□□ -0.48
SCARF1-208ENST00000574545 PLA2G2DQ9UNK4 145 aa12.07□□□□□ -0.48
SCARF1-208ENST00000574545 C6orf226Q5I0X4 101 aa12.06□□□□□ -0.48
SCARF1-208ENST00000574545 IGLV5-45A0A087WSX0 123 aa12.05□□□□□ -0.48
SCARF1-208ENST00000574545 TINCRA0A1B0GVN0 87 aa12.05□□□□□ -0.48
SCARF1-208ENST00000574545 PRSS2P07478 247 aa12.05□□□□□ -0.48
SCARF1-208ENST00000574545 REG3GQ6UW15 175 aa12.05□□□□□ -0.48
SCARF1-208ENST00000574545 GEMIN7Q9H840 131 aaKnown RBP12.05□□□□□ -0.48
SCARF1-208ENST00000574545 C1orf137Q5JT78 98 aa12.04□□□□□ -0.48
SCARF1-208ENST00000574545 FAM19A5Q7Z5A7 132 aaPredicted RBP12.04□□□□□ -0.48
SCARF1-208ENST00000574545 URB1-AS1Q96HZ7 61 aa12.04□□□□□ -0.48
SCARF1-208ENST00000574545 CST9LQ9H4G1 147 aa12.04□□□□□ -0.48
SCARF1-208ENST00000574545 A0A096LNJ9 63 aa12.03□□□□□ -0.48
SCARF1-208ENST00000574545 SMIM1B2RUZ4 78 aa12.03□□□□□ -0.48
SCARF1-208ENST00000574545 CKS1BP61024 79 aa12.03□□□□□ -0.48
SCARF1-208ENST00000574545 FA2HQ7L5A8 372 aa12.03□□□□□ -0.48
SCARF1-208ENST00000574545 APOC3P02656 99 aa12.01□□□□□ -0.49
SCARF1-208ENST00000574545 IGLV7-43P04211 117 aa12.01□□□□□ -0.49
SCARF1-208ENST00000574545 LINC00469Q8N7U9 141 aa12.01□□□□□ -0.49
SCARF1-208ENST00000574545 C18orf32Q8TCD1 76 aa12.01□□□□□ -0.49
SCARF1-208ENST00000574545 LRP2P98164 4655 aa12□□□□□ -0.49
SCARF1-208ENST00000574545 F8VRH5 84 aa12□□□□□ -0.49
SCARF1-208ENST00000574545 ODF1Q14990 250 aa12□□□□□ -0.49
SCARF1-208ENST00000574545 PMVKQ15126 192 aa12□□□□□ -0.49
SCARF1-208ENST00000574545 PDZD11Q5EBL8 140 aa12□□□□□ -0.49
SCARF1-208ENST00000574545 SMCO4Q9NRQ5 59 aa12□□□□□ -0.49
SCARF1-208ENST00000574545 TRAPPC1Q9Y5R8 145 aa12□□□□□ -0.49
SCARF1-208ENST00000574545 M0QXV9 152 aa11.99□□□□□ -0.49
SCARF1-208ENST00000574545 CXCL5P42830 114 aa11.98□□□□□ -0.49
SCARF1-208ENST00000574545 SNAPINO95295 136 aa11.97□□□□□ -0.49
SCARF1-208ENST00000574545 LINC00614P0C842 121 aa11.97□□□□□ -0.49
SCARF1-208ENST00000574545 SVBPQ8N300 66 aa11.97□□□□□ -0.49
SCARF1-208ENST00000574545 COX7B2Q8TF08 81 aa11.97□□□□□ -0.49
SCARF1-208ENST00000574545 YPEL4Q96NS1 127 aa11.96□□□□□ -0.49
SCARF1-208ENST00000574545 XAGE1AQ9HD64 81 aa11.96□□□□□ -0.49
SCARF1-208ENST00000574545 SPINK8P0C7L1 97 aa11.94□□□□□ -0.5
SCARF1-208ENST00000574545 IGLC3P0DOY3 106 aa11.94□□□□□ -0.5
SCARF1-208ENST00000574545 C22orf24Q9Y442 160 aa11.94□□□□□ -0.5
SCARF1-208ENST00000574545 UBE2BP63146 152 aa11.93□□□□□ -0.5
SCARF1-208ENST00000574545 NDUFA5Q16718 116 aa11.93□□□□□ -0.5
SCARF1-208ENST00000574545 HBDP02042 147 aa11.92□□□□□ -0.5
SCARF1-208ENST00000574545 DIRC1Q969H9 104 aa11.92□□□□□ -0.5
SCARF1-208ENST00000574545 IGLV5-39A0A0G2JS06 123 aa11.91□□□□□ -0.5
SCARF1-208ENST00000574545 H0Y9J4 135 aa11.91□□□□□ -0.5
SCARF1-208ENST00000574545 PMCHL1Q16048 86 aa11.91□□□□□ -0.5
SCARF1-208ENST00000574545 TP73-AS1Q9UF72 201 aa11.9□□□□□ -0.5
SCARF1-208ENST00000574545 H3BRM9 83 aa11.89□□□□□ -0.51
SCARF1-208ENST00000574545 ZNF22P17026 224 aaPredicted RBP11.89□□□□□ -0.51
SCARF1-208ENST00000574545 RAB5BP61020 215 aa11.89□□□□□ -0.51
SCARF1-208ENST00000574545 KRTAP1-4P0C5Y4 121 aa11.88□□□□□ -0.51
SCARF1-208ENST00000574545 LBHQ53QV2 105 aaPredicted RBP11.87□□□□□ -0.51
SCARF1-208ENST00000574545 ATP5LO75964 103 aa11.86□□□□□ -0.51
SCARF1-208ENST00000574545 NDUFA6P56556 154 aa11.86□□□□□ -0.51
SCARF1-208ENST00000574545 NUPR1O60356 82 aa11.85□□□□□ -0.51
SCARF1-208ENST00000574545 MRPL55Q7Z7F7 128 aaKnown RBP11.85□□□□□ -0.51
SCARF1-208ENST00000574545 PRR26Q8N8Z3 221 aa11.85□□□□□ -0.51
SCARF1-208ENST00000574545 C11orf86A6NJI1 115 aa11.84□□□□□ -0.51
SCARF1-208ENST00000574545 ZNF861PO60384 105 aa11.84□□□□□ -0.51
SCARF1-208ENST00000574545 BAGE3Q86Y29 109 aa11.84□□□□□ -0.51
SCARF1-208ENST00000574545 IGLV5-37A0A075B6J1 123 aa11.83□□□□□ -0.52
SCARF1-208ENST00000574545 LINC00167Q96N53 147 aa11.83□□□□□ -0.52
SCARF1-208ENST00000574545 CHCHD1Q96BP2 118 aaKnown RBP11.82□□□□□ -0.52
SCARF1-208ENST00000574545 LPAP08519 4548 aa11.81□□□□□ -0.52
SCARF1-208ENST00000574545 CBLN2Q8IUK8 224 aa11.8□□□□□ -0.52
SCARF1-208ENST00000574545 IGLV1-50A0A075B6I6 118 aa11.79□□□□□ -0.52
SCARF1-208ENST00000574545 CHTOPQ9Y3Y2 248 aaKnown RBP11.79□□□□□ -0.52
SCARF1-208ENST00000574545 TRAV12-1A0A0B4J245 112 aa11.78□□□□□ -0.52
SCARF1-208ENST00000574545 PFN2P35080 140 aa11.78□□□□□ -0.52
SCARF1-208ENST00000574545 RPL37AP8A6NKH3 93 aa11.77□□□□□ -0.53
SCARF1-208ENST00000574545 BCE1O60756 84 aa11.77□□□□□ -0.53
SCARF1-208ENST00000574545 TMEM170BQ5T4T1 132 aa11.77□□□□□ -0.53
SCARF1-208ENST00000574545 ZNF625Q96I27 306 aaPredicted RBP11.77□□□□□ -0.53
SCARF1-208ENST00000574545 ERG28Q9UKR5 140 aa11.77□□□□□ -0.53
SCARF1-208ENST00000574545 COX17Q14061 63 aa11.76□□□□□ -0.53
SCARF1-208ENST00000574545 IFI27L1Q96BM0 104 aa11.76□□□□□ -0.53
SCARF1-208ENST00000574545 GAGE10A6NGK3 116 aa11.75□□□□□ -0.53
SCARF1-208ENST00000574545 SND1-IT1Q9HBX3 110 aa11.75□□□□□ -0.53
SCARF1-208ENST00000574545 RNF213Q63HN8 5207 aa11.74□□□□□ -0.53
SCARF1-208ENST00000574545 TMEM223A0PJW6 202 aa11.74□□□□□ -0.53
SCARF1-208ENST00000574545 VPREB1P12018 145 aa11.74□□□□□ -0.53
SCARF1-208ENST00000574545 SCO1O75880 301 aa11.73□□□□□ -0.53
SCARF1-208ENST00000574545 TRGC2P03986 189 aa11.73□□□□□ -0.53
SCARF1-208ENST00000574545 SFTA2Q6UW10 78 aa11.73□□□□□ -0.53
SCARF1-208ENST00000574545 KRTAP13-1Q8IUC0 172 aa11.73□□□□□ -0.53
SCARF1-208ENST00000574545 FAM19A2Q8N3H0 131 aa11.73□□□□□ -0.53
SCARF1-208ENST00000574545 NKAPP1Q8N9T2 125 aa11.73□□□□□ -0.53
SCARF1-208ENST00000574545 RPL28P46779 137 aaKnown RBP11.72□□□□□ -0.53
SCARF1-208ENST00000574545 LINC00310P59036 64 aa11.72□□□□□ -0.53
SCARF1-208ENST00000574545 SLC7A5P1Q8MH63 180 aa11.72□□□□□ -0.53
SCARF1-208ENST00000574545 Q8NDZ9 215 aa11.72□□□□□ -0.53
SCARF1-208ENST00000574545 HSBP1O75506 76 aa11.7□□□□□ -0.54
SCARF1-208ENST00000574545 RPL13AP40429 203 aaKnown RBP11.69□□□□□ -0.54
SCARF1-208ENST00000574545 IGKV2-28A0A075B6P5 120 aa11.68□□□□□ -0.54
SCARF1-208ENST00000574545 IGKV2D-28P01615 120 aa11.68□□□□□ -0.54
SCARF1-208ENST00000574545 RPL24P83731 157 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms