RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 DNHD1Q96M86 4753 aa8.65□□□□□ -1.02
PRPF8-207ENST00000573681 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.65□□□□□ -1.02
PRPF8-207ENST00000573681 KRTAP26-1Q6PEX3 210 aa8.65□□□□□ -1.02
PRPF8-207ENST00000573681 RMI2Q96E14 147 aa8.65□□□□□ -1.02
PRPF8-207ENST00000573681 COX11Q9Y6N1 276 aa8.65□□□□□ -1.02
PRPF8-207ENST00000573681 TENM3Q9P273 2699 aa8.65□□□□□ -1.03
PRPF8-207ENST00000573681 C9orf118A6NHY6 69 aa8.64□□□□□ -1.03
PRPF8-207ENST00000573681 A4D1N5 150 aa8.63□□□□□ -1.03
PRPF8-207ENST00000573681 UBE2DNLQ8IWF7 75 aa8.63□□□□□ -1.03
PRPF8-207ENST00000573681 IGKV2D-24A0A075B6R9 120 aa8.62□□□□□ -1.03
PRPF8-207ENST00000573681 F8WDY8 70 aa8.62□□□□□ -1.03
PRPF8-207ENST00000573681 LINC00158P58513 81 aa8.62□□□□□ -1.03
PRPF8-207ENST00000573681 SPAG11BQ08648 103 aa8.62□□□□□ -1.03
PRPF8-207ENST00000573681 COX17Q14061 63 aa8.62□□□□□ -1.03
PRPF8-207ENST00000573681 LINC00308Q8TCZ7 52 aa8.62□□□□□ -1.03
PRPF8-207ENST00000573681 RAB37Q96AX2 223 aa8.62□□□□□ -1.03
PRPF8-207ENST00000573681 CFC1BP0CG36 223 aa8.61□□□□□ -1.03
PRPF8-207ENST00000573681 CFC1P0CG37 223 aa8.61□□□□□ -1.03
PRPF8-207ENST00000573681 ERG28Q9UKR5 140 aa8.61□□□□□ -1.03
PRPF8-207ENST00000573681 A0A0B4J2C4 111 aa8.6□□□□□ -1.03
PRPF8-207ENST00000573681 A0A0U1RRA0 63 aa8.6□□□□□ -1.03
PRPF8-207ENST00000573681 ZNF561-AS1K7EIQ3 104 aa8.6□□□□□ -1.03
PRPF8-207ENST00000573681 C2orf82Q6UX34 121 aa8.6□□□□□ -1.03
PRPF8-207ENST00000573681 MUC7Q8TAX7 377 aa8.6□□□□□ -1.03
PRPF8-207ENST00000573681 NTN5Q8WTR8 489 aaPredicted RBP8.6□□□□□ -1.03
PRPF8-207ENST00000573681 PRO1854Q9UHT4 67 aa8.6□□□□□ -1.03
PRPF8-207ENST00000573681 K7ERJ3 54 aa8.59□□□□□ -1.03
PRPF8-207ENST00000573681 DAND5Q8N907 189 aa8.59□□□□□ -1.03
PRPF8-207ENST00000573681 C2orf48Q96LS8 159 aa8.59□□□□□ -1.03
PRPF8-207ENST00000573681 GVQW2A0A096LPI5 108 aaPredicted RBP8.58□□□□□ -1.04
PRPF8-207ENST00000573681 H3BUT2 72 aa8.58□□□□□ -1.04
PRPF8-207ENST00000573681 PFN2P35080 140 aa8.58□□□□□ -1.04
PRPF8-207ENST00000573681 MIR7-3HGQ8N6C7 128 aa8.58□□□□□ -1.04
PRPF8-207ENST00000573681 Q9HAA7 133 aa8.58□□□□□ -1.04
PRPF8-207ENST00000573681 NPC2P61916 151 aa8.57□□□□□ -1.04
PRPF8-207ENST00000573681 VAMP3Q15836 100 aa8.57□□□□□ -1.04
PRPF8-207ENST00000573681 LOC107984156A0A0G2JMH3 177 aa8.56□□□□□ -1.04
PRPF8-207ENST00000573681 UNQ6190/PRO20217Q6UXQ8 127 aa8.56□□□□□ -1.04
PRPF8-207ENST00000573681 ARL17AQ8IVW1 177 aa8.56□□□□□ -1.04
PRPF8-207ENST00000573681 PGPEP1Q9NXJ5 209 aa8.56□□□□□ -1.04
PRPF8-207ENST00000573681 TRBV30A0A0K0K1B3 111 aa8.55□□□□□ -1.04
PRPF8-207ENST00000573681 A0A1W2PPM0 123 aa8.55□□□□□ -1.04
PRPF8-207ENST00000573681 FABP2P12104 132 aa8.55□□□□□ -1.04
PRPF8-207ENST00000573681 TTC32Q5I0X7 151 aa8.55□□□□□ -1.04
PRPF8-207ENST00000573681 SOSTDC1Q6X4U4 206 aa8.55□□□□□ -1.04
PRPF8-207ENST00000573681 C6orf223Q8N319 242 aa8.55□□□□□ -1.04
PRPF8-207ENST00000573681 C15orf56Q8N910 161 aa8.55□□□□□ -1.04
PRPF8-207ENST00000573681 EIF4EBP3O60516 100 aaPredicted RBP8.54□□□□□ -1.04
PRPF8-207ENST00000573681 C10orf25Q5T742 122 aa8.54□□□□□ -1.04
PRPF8-207ENST00000573681 CAMK2N2Q96S95 79 aa8.54□□□□□ -1.04
PRPF8-207ENST00000573681 UBE2V1Q13404 147 aa8.53□□□□□ -1.04
PRPF8-207ENST00000573681 HIGD2BQ4VC39 106 aa8.53□□□□□ -1.04
PRPF8-207ENST00000573681 GTF2H5Q6ZYL4 71 aa8.53□□□□□ -1.04
PRPF8-207ENST00000573681 LINC00526Q96FQ7 95 aa8.53□□□□□ -1.04
PRPF8-207ENST00000573681 SND1-IT1Q9HBX3 110 aa8.53□□□□□ -1.04
PRPF8-207ENST00000573681 GAGE10A6NGK3 116 aa8.52□□□□□ -1.05
PRPF8-207ENST00000573681 TSPAN13O95857 204 aa8.52□□□□□ -1.05
PRPF8-207ENST00000573681 LYRM7Q5U5X0 104 aa8.52□□□□□ -1.05
PRPF8-207ENST00000573681 DYNC2H1Q8NCM8 4307 aaKnown RBP8.51□□□□□ -1.05
PRPF8-207ENST00000573681 TRAV13-2A0A0B4J235 113 aa8.51□□□□□ -1.05
PRPF8-207ENST00000573681 RNF151Q2KHN1 245 aa8.51□□□□□ -1.05
PRPF8-207ENST00000573681 WWC2-AS2Q96NR7 200 aa8.51□□□□□ -1.05
PRPF8-207ENST00000573681 NAA38Q9BRA0 125 aaKnown RBP8.51□□□□□ -1.05
PRPF8-207ENST00000573681 C6orf48Q9UBA6 75 aa8.51□□□□□ -1.05
PRPF8-207ENST00000573681 NBDYA0A0U1RRE5 68 aa8.5□□□□□ -1.05
PRPF8-207ENST00000573681 USP17L23D6RBM5 183 aa8.5□□□□□ -1.05
PRPF8-207ENST00000573681 SYCNQ0VAF6 134 aa8.5□□□□□ -1.05
PRPF8-207ENST00000573681 C9orf116Q5BN46 136 aaPredicted RBP8.5□□□□□ -1.05
PRPF8-207ENST00000573681 SPCS1Q9Y6A9 102 aa8.5□□□□□ -1.05
PRPF8-207ENST00000573681 K7EP34 96 aa8.49□□□□□ -1.05
PRPF8-207ENST00000573681 NDUFC2O95298 119 aa8.49□□□□□ -1.05
PRPF8-207ENST00000573681 PSMB2P49721 201 aa8.49□□□□□ -1.05
PRPF8-207ENST00000573681 Q1RN00 199 aa8.49□□□□□ -1.05
PRPF8-207ENST00000573681 Q6ZRU5 148 aa8.49□□□□□ -1.05
PRPF8-207ENST00000573681 COX6CP09669 75 aa8.48□□□□□ -1.05
PRPF8-207ENST00000573681 SCGB1C2P0DMR2 95 aa8.48□□□□□ -1.05
PRPF8-207ENST00000573681 KRTAP1-5Q9BYS1 174 aa8.48□□□□□ -1.05
PRPF8-207ENST00000573681 H7C2G1 150 aa8.47□□□□□ -1.05
PRPF8-207ENST00000573681 PSCAO43653 123 aa8.47□□□□□ -1.05
PRPF8-207ENST00000573681 RPL13AP40429 203 aaKnown RBP8.47□□□□□ -1.05
PRPF8-207ENST00000573681 CASC10Q5T4H9 136 aa8.47□□□□□ -1.05
PRPF8-207ENST00000573681 LCE2DQ5TA82 110 aaPredicted RBP8.47□□□□□ -1.05
PRPF8-207ENST00000573681 COL7A1Q02388 2944 aa8.46□□□□□ -1.06
PRPF8-207ENST00000573681 TRBV20-1A0A075B6N2 111 aa8.46□□□□□ -1.06
PRPF8-207ENST00000573681 NDUFC2-KCTD14E9PQ53 114 aa8.46□□□□□ -1.06
PRPF8-207ENST00000573681 C14orf177Q52M58 125 aa8.46□□□□□ -1.06
PRPF8-207ENST00000573681 MEGF8Q7Z7M0 2845 aa8.46□□□□□ -1.06
PRPF8-207ENST00000573681 IGKV2-28A0A075B6P5 120 aa8.45□□□□□ -1.06
PRPF8-207ENST00000573681 IGKV2D-28P01615 120 aa8.45□□□□□ -1.06
PRPF8-207ENST00000573681 TLX1NBP0CAT3 122 aa8.45□□□□□ -1.06
PRPF8-207ENST00000573681 CARD19Q96LW7 228 aa8.45□□□□□ -1.06
PRPF8-207ENST00000573681 STAB2Q8WWQ8 2551 aa8.44□□□□□ -1.06
PRPF8-207ENST00000573681 C3orf84H3BNL1 204 aa8.43□□□□□ -1.06
PRPF8-207ENST00000573681 LINC00337Q8N6G1 96 aa8.43□□□□□ -1.06
PRPF8-207ENST00000573681 PRKDCP78527 4128 aaKnown RBP8.42□□□□□ -1.06
PRPF8-207ENST00000573681 TRBV10-2A0A0K0K1G8 114 aa8.42□□□□□ -1.06
PRPF8-207ENST00000573681 SLPIP03973 132 aa8.42□□□□□ -1.06
PRPF8-207ENST00000573681 RPL28P46779 137 aaKnown RBP8.42□□□□□ -1.06
PRPF8-207ENST00000573681 OR13C6PQ8NH95 151 aa8.42□□□□□ -1.06
PRPF8-207ENST00000573681 TRIAP1O43715 76 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms