RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 F8WEM9 126 aa6.33□□□□□ -1.4
TVP23A-205ENST00000572428 MSRB1Q9NZV6 116 aa6.33□□□□□ -1.4
TVP23A-205ENST00000572428 MRPL51Q4U2R6 128 aaKnown RBP6.32□□□□□ -1.4
TVP23A-205ENST00000572428 FAM30AQ9NZY2 134 aa6.32□□□□□ -1.4
TVP23A-205ENST00000572428 A0A0B4J2C4 111 aa6.32□□□□□ -1.4
TVP23A-205ENST00000572428 IGKV3D-20A0A0C4DH25 116 aa6.32□□□□□ -1.4
TVP23A-205ENST00000572428 D6R8Y8 96 aa6.32□□□□□ -1.4
TVP23A-205ENST00000572428 PRSS2P07478 247 aa6.32□□□□□ -1.4
TVP23A-205ENST00000572428 KLHL30-AS1Q8NEE0 82 aa6.32□□□□□ -1.4
TVP23A-205ENST00000572428 IGHV4-4A0A075B6R2 117 aa6.31□□□□□ -1.4
TVP23A-205ENST00000572428 H7C423 109 aa6.31□□□□□ -1.4
TVP23A-205ENST00000572428 CKS2P33552 79 aa6.31□□□□□ -1.4
TVP23A-205ENST00000572428 ESRGQ1W209 222 aa6.31□□□□□ -1.4
TVP23A-205ENST00000572428 CHCHD10Q8WYQ3 142 aaPredicted RBP6.31□□□□□ -1.4
TVP23A-205ENST00000572428 IFI27L1Q96BM0 104 aa6.31□□□□□ -1.4
TVP23A-205ENST00000572428 TRAV13-2A0A0B4J235 113 aa6.31□□□□□ -1.4
TVP23A-205ENST00000572428 TRAV21A0A0B4J279 112 aa6.31□□□□□ -1.4
TVP23A-205ENST00000572428 KLKP1Q107X0 134 aa6.31□□□□□ -1.4
TVP23A-205ENST00000572428 ATXN8Q156A1 80 aa6.31□□□□□ -1.4
TVP23A-205ENST00000572428 SYCNQ0VAF6 134 aa6.31□□□□□ -1.4
TVP23A-205ENST00000572428 PSMG4Q5JS54 123 aa6.31□□□□□ -1.4
TVP23A-205ENST00000572428 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
TVP23A-205ENST00000572428 C11orf21Q9P2W6 132 aa6.3□□□□□ -1.4
TVP23A-205ENST00000572428 NF1P21359 2839 aa6.3□□□□□ -1.4
TVP23A-205ENST00000572428 PRSS1P07477 247 aa6.3□□□□□ -1.4
TVP23A-205ENST00000572428 ATP5EP56381 51 aaPredicted RBP6.3□□□□□ -1.4
TVP23A-205ENST00000572428 ZFAND2AQ8N6M9 145 aa6.3□□□□□ -1.4
TVP23A-205ENST00000572428 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.3□□□□□ -1.4
TVP23A-205ENST00000572428 C16orf90A8MZG2 172 aa6.3□□□□□ -1.4
TVP23A-205ENST00000572428 S100A4P26447 101 aaKnown RBP6.3□□□□□ -1.4
TVP23A-205ENST00000572428 SLURP1P55000 103 aa6.3□□□□□ -1.4
TVP23A-205ENST00000572428 KRTAP24-1Q3LI83 254 aa6.3□□□□□ -1.4
TVP23A-205ENST00000572428 Q6ZRP5 223 aa6.3□□□□□ -1.4
TVP23A-205ENST00000572428 LINC01546A6NGU7 62 aa6.29□□□□□ -1.4
TVP23A-205ENST00000572428 PSPHP1O15172 72 aa6.29□□□□□ -1.4
TVP23A-205ENST00000572428 Q1T7F1 81 aa6.29□□□□□ -1.4
TVP23A-205ENST00000572428 BAALC-AS2P0C853 105 aa6.29□□□□□ -1.4
TVP23A-205ENST00000572428 DEFB136Q30KP8 78 aa6.29□□□□□ -1.4
TVP23A-205ENST00000572428 SPTSSBQ8NFR3 76 aa6.29□□□□□ -1.4
TVP23A-205ENST00000572428 RMI2Q96E14 147 aa6.29□□□□□ -1.4
TVP23A-205ENST00000572428 MUC4Q99102 2169 aa6.29□□□□□ -1.4
TVP23A-205ENST00000572428 CFC1BP0CG36 223 aa6.28□□□□□ -1.4
TVP23A-205ENST00000572428 CFC1P0CG37 223 aa6.28□□□□□ -1.4
TVP23A-205ENST00000572428 GAS8-AS1O95177 125 aa6.28□□□□□ -1.4
TVP23A-205ENST00000572428 PRR9Q5T870 116 aa6.28□□□□□ -1.4
TVP23A-205ENST00000572428 SPANXN1Q5VSR9 72 aa6.28□□□□□ -1.4
TVP23A-205ENST00000572428 MGPP08493 103 aa6.27□□□□□ -1.41
TVP23A-205ENST00000572428 IGKV3D-7A0A0C4DH55 119 aa6.27□□□□□ -1.41
TVP23A-205ENST00000572428 UBE2AP49459 152 aa6.27□□□□□ -1.41
TVP23A-205ENST00000572428 TMEM61Q8N0U2 210 aa6.27□□□□□ -1.41
TVP23A-205ENST00000572428 SNURFQ9Y675 71 aa6.27□□□□□ -1.41
TVP23A-205ENST00000572428 LINC00269Q8N2A0 174 aa6.26□□□□□ -1.41
TVP23A-205ENST00000572428 UBE2D4Q9Y2X8 147 aa6.26□□□□□ -1.41
TVP23A-205ENST00000572428 CELA1Q9UNI1 258 aa6.26□□□□□ -1.41
TVP23A-205ENST00000572428 K7EQG2 157 aa6.26□□□□□ -1.41
TVP23A-205ENST00000572428 ATP11AUNQ6ZP68 121 aa6.25□□□□□ -1.41
TVP23A-205ENST00000572428 DEFB114Q30KQ6 69 aa6.25□□□□□ -1.41
TVP23A-205ENST00000572428 FAM74A4Q5TZK3 123 aa6.25□□□□□ -1.41
TVP23A-205ENST00000572428 PRO1854Q9UHT4 67 aa6.25□□□□□ -1.41
TVP23A-205ENST00000572428 TIMM21Q9BVV7 248 aa6.24□□□□□ -1.41
TVP23A-205ENST00000572428 PHLDA3Q9Y5J5 127 aa6.24□□□□□ -1.41
TVP23A-205ENST00000572428 PPP1R17O96001 155 aa6.24□□□□□ -1.41
TVP23A-205ENST00000572428 A0A0J9YX75 114 aa6.24□□□□□ -1.41
TVP23A-205ENST00000572428 PRM2P04554 102 aa6.24□□□□□ -1.41
TVP23A-205ENST00000572428 WFDC9Q8NEX5 89 aa6.24□□□□□ -1.41
TVP23A-205ENST00000572428 IGLV1-51P01701 117 aa6.23□□□□□ -1.41
TVP23A-205ENST00000572428 IGLV2-18A0A075B6J9 118 aa6.23□□□□□ -1.41
TVP23A-205ENST00000572428 IGHV3OR16-9A0A0B4J2B5 98 aa6.23□□□□□ -1.41
TVP23A-205ENST00000572428 TMEM223A0PJW6 202 aa6.23□□□□□ -1.41
TVP23A-205ENST00000572428 DAND5Q8N907 189 aa6.23□□□□□ -1.41
TVP23A-205ENST00000572428 NDUFA12Q9UI09 145 aa6.23□□□□□ -1.41
TVP23A-205ENST00000572428 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
TVP23A-205ENST00000572428 PRAC1Q96KF2 57 aa6.23□□□□□ -1.41
TVP23A-205ENST00000572428 SND1-IT1Q9HBX3 110 aa6.23□□□□□ -1.41
TVP23A-205ENST00000572428 TRAV22A0A0B4J277 110 aa6.22□□□□□ -1.41
TVP23A-205ENST00000572428 A8MTW9 85 aa6.22□□□□□ -1.41
TVP23A-205ENST00000572428 RNASE3P12724 160 aaKnown RBP6.22□□□□□ -1.41
TVP23A-205ENST00000572428 IGHV3-33P01772 117 aa6.22□□□□□ -1.41
TVP23A-205ENST00000572428 Q6JHZ5 121 aa6.22□□□□□ -1.41
TVP23A-205ENST00000572428 C14orf178Q8N769 122 aaPredicted RBP6.22□□□□□ -1.41
TVP23A-205ENST00000572428 MAST4O15021 2626 aa6.22□□□□□ -1.41
TVP23A-205ENST00000572428 GNRH2O43555 120 aa6.21□□□□□ -1.42
TVP23A-205ENST00000572428 SMIM2Q9BVW6 85 aa6.21□□□□□ -1.42
TVP23A-205ENST00000572428 NIPBLQ6KC79 2804 aaeCLIP6.2□□□□□ -1.42
TVP23A-205ENST00000572428 TRAV23DV6A0A075B6W5 121 aa6.2□□□□□ -1.42
TVP23A-205ENST00000572428 IGHV3-73A0A0B4J1V6 119 aa6.2□□□□□ -1.42
TVP23A-205ENST00000572428 MIFP14174 115 aa6.2□□□□□ -1.42
TVP23A-205ENST00000572428 RPL28P46779 137 aaKnown RBP6.2□□□□□ -1.42
TVP23A-205ENST00000572428 CMYA5Q8N3K9 4069 aa6.2□□□□□ -1.42
TVP23A-205ENST00000572428 FBN1P35555 2871 aaKnown RBP6.2□□□□□ -1.42
TVP23A-205ENST00000572428 TRAV12-3A0A0B4J271 114 aa6.2□□□□□ -1.42
TVP23A-205ENST00000572428 H7C2G1 150 aa6.2□□□□□ -1.42
TVP23A-205ENST00000572428 DYNLRB2Q8TF09 96 aa6.19□□□□□ -1.42
TVP23A-205ENST00000572428 IGHV3OR16-12A0A075B7B8 117 aa6.19□□□□□ -1.42
TVP23A-205ENST00000572428 CMC4P56277 68 aaPredicted RBP6.19□□□□□ -1.42
TVP23A-205ENST00000572428 CXCL6P80162 114 aa6.19□□□□□ -1.42
TVP23A-205ENST00000572428 C9orf66Q5T8R8 295 aa6.19□□□□□ -1.42
TVP23A-205ENST00000572428 ADM2Q7Z4H4 148 aa6.19□□□□□ -1.42
TVP23A-205ENST00000572428 TEP1Q99973 2627 aaKnown RBP6.19□□□□□ -1.42
TVP23A-205ENST00000572428 IGHV1OR15-1A0A075B7D0 117 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms