RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 MRPL35Q9NZE8 188 aaKnown RBP5.41□□□□□ -1.54
SMG6-210ENST00000572205 A0A1W2PNN7 141 aa5.4□□□□□ -1.54
SMG6-210ENST00000572205 TLX1NBP0CAT3 122 aa5.4□□□□□ -1.54
SMG6-210ENST00000572205 MT1HL1P0DM35 61 aa5.4□□□□□ -1.54
SMG6-210ENST00000572205 PRR3P79522 188 aaKnown RBP5.4□□□□□ -1.54
SMG6-210ENST00000572205 FABP9Q0Z7S8 132 aa5.4□□□□□ -1.54
SMG6-210ENST00000572205 UNQ6190/PRO20217Q6UXQ8 127 aa5.4□□□□□ -1.54
SMG6-210ENST00000572205 Q6ZRP5 223 aa5.4□□□□□ -1.54
SMG6-210ENST00000572205 SLC7A5P1Q8MH63 180 aa5.4□□□□□ -1.54
SMG6-210ENST00000572205 STPG4Q8N801 248 aa5.4□□□□□ -1.54
SMG6-210ENST00000572205 CAMK2N2Q96S95 79 aa5.4□□□□□ -1.54
SMG6-210ENST00000572205 CDKN2A-AS1Q9UH64 79 aa5.4□□□□□ -1.54
SMG6-210ENST00000572205 LOC107984640A0A0U1RRK4 108 aa5.39□□□□□ -1.55
SMG6-210ENST00000572205 SMIM1B2RUZ4 78 aa5.39□□□□□ -1.55
SMG6-210ENST00000572205 MAJINQ3KP22 176 aa5.39□□□□□ -1.55
SMG6-210ENST00000572205 LBHQ53QV2 105 aaPredicted RBP5.39□□□□□ -1.55
SMG6-210ENST00000572205 PDZD11Q5EBL8 140 aa5.39□□□□□ -1.55
SMG6-210ENST00000572205 C2orf82Q6UX34 121 aa5.39□□□□□ -1.55
SMG6-210ENST00000572205 KRTAP11-1Q8IUC1 163 aa5.39□□□□□ -1.55
SMG6-210ENST00000572205 F8WDY8 70 aa5.38□□□□□ -1.55
SMG6-210ENST00000572205 CST9LQ9H4G1 147 aa5.38□□□□□ -1.55
SMG6-210ENST00000572205 TRAPPC1Q9Y5R8 145 aa5.38□□□□□ -1.55
SMG6-210ENST00000572205 TINCRA0A1B0GVN0 87 aa5.37□□□□□ -1.55
SMG6-210ENST00000572205 FAM168BA1KXE4 195 aa5.37□□□□□ -1.55
SMG6-210ENST00000572205 C5orf52A6NGY3 159 aa5.37□□□□□ -1.55
SMG6-210ENST00000572205 PMCHL1Q16048 86 aa5.37□□□□□ -1.55
SMG6-210ENST00000572205 C9orf129Q5T035 196 aaKnown RBP5.37□□□□□ -1.55
SMG6-210ENST00000572205 Q6ZN92 141 aa5.37□□□□□ -1.55
SMG6-210ENST00000572205 Q8IZM0 81 aa5.37□□□□□ -1.55
SMG6-210ENST00000572205 SCGB3A1Q96QR1 104 aa5.37□□□□□ -1.55
SMG6-210ENST00000572205 C2orf88Q9BSF0 95 aa5.37□□□□□ -1.55
SMG6-210ENST00000572205 VCX2Q9H322 139 aa5.37□□□□□ -1.55
SMG6-210ENST00000572205 IGLV5-39A0A0G2JS06 123 aa5.36□□□□□ -1.55
SMG6-210ENST00000572205 NDUFA1O15239 70 aa5.36□□□□□ -1.55
SMG6-210ENST00000572205 IGLC3P0DOY3 106 aa5.36□□□□□ -1.55
SMG6-210ENST00000572205 HERVK_113P63121 156 aa5.36□□□□□ -1.55
SMG6-210ENST00000572205 NDUFA5Q16718 116 aa5.36□□□□□ -1.55
SMG6-210ENST00000572205 C9orf116Q5BN46 136 aaPredicted RBP5.36□□□□□ -1.55
SMG6-210ENST00000572205 LINC00474Q9P2X8 69 aa5.36□□□□□ -1.55
SMG6-210ENST00000572205 UBR4Q5T4S7 5183 aa5.35□□□□□ -1.55
SMG6-210ENST00000572205 TRBV30A0A0K0K1B3 111 aa5.35□□□□□ -1.55
SMG6-210ENST00000572205 COLCA2A8K830 154 aa5.35□□□□□ -1.55
SMG6-210ENST00000572205 HBDP02042 147 aa5.35□□□□□ -1.55
SMG6-210ENST00000572205 LINC00614P0C842 121 aa5.35□□□□□ -1.55
SMG6-210ENST00000572205 RPL18AQ02543 176 aaKnown RBP5.35□□□□□ -1.55
SMG6-210ENST00000572205 GAGE2BQ13066 116 aa5.35□□□□□ -1.55
SMG6-210ENST00000572205 UBE2V1Q13404 147 aa5.35□□□□□ -1.55
SMG6-210ENST00000572205 PMVKQ15126 192 aa5.35□□□□□ -1.55
SMG6-210ENST00000572205 FA2HQ7L5A8 372 aa5.35□□□□□ -1.55
SMG6-210ENST00000572205 LINC01549A6NIU2 74 aa5.34□□□□□ -1.55
SMG6-210ENST00000572205 ZNF22P17026 224 aaPredicted RBP5.34□□□□□ -1.55
SMG6-210ENST00000572205 SRSF9Q13242 221 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMG6-210ENST00000572205 PAPPA-AS1Q5QFB9 102 aa5.34□□□□□ -1.55
SMG6-210ENST00000572205 PKIGQ9Y2B9 76 aa5.34□□□□□ -1.55
SMG6-210ENST00000572205 C11orf86A6NJI1 115 aa5.33□□□□□ -1.56
SMG6-210ENST00000572205 NDUFC2-KCTD14E9PQ53 114 aa5.33□□□□□ -1.56
SMG6-210ENST00000572205 OXTP01178 125 aa5.33□□□□□ -1.56
SMG6-210ENST00000572205 G0S2P27469 103 aa5.33□□□□□ -1.56
SMG6-210ENST00000572205 SNRPEP62304 92 aaKnown RBP5.33□□□□□ -1.56
SMG6-210ENST00000572205 PHF5AQ7RTV0 110 aaKnown RBP5.33□□□□□ -1.56
SMG6-210ENST00000572205 SMCO4Q9NRQ5 59 aa5.33□□□□□ -1.56
SMG6-210ENST00000572205 TRGC2P03986 189 aa5.32□□□□□ -1.56
SMG6-210ENST00000572205 SPINK8P0C7L1 97 aa5.32□□□□□ -1.56
SMG6-210ENST00000572205 SEC11AP67812 179 aa5.32□□□□□ -1.56
SMG6-210ENST00000572205 LINC00469Q8N7U9 141 aa5.32□□□□□ -1.56
SMG6-210ENST00000572205 PSORS1C2Q9UIG4 136 aa5.32□□□□□ -1.56
SMG6-210ENST00000572205 LRP2P98164 4655 aa5.32□□□□□ -1.56
SMG6-210ENST00000572205 F8VRH5 84 aa5.31□□□□□ -1.56
SMG6-210ENST00000572205 NUPR1O60356 82 aa5.31□□□□□ -1.56
SMG6-210ENST00000572205 SCO1O75880 301 aa5.31□□□□□ -1.56
SMG6-210ENST00000572205 C7orf33Q8WU49 177 aa5.31□□□□□ -1.56
SMG6-210ENST00000572205 CHCHD1Q96BP2 118 aaKnown RBP5.31□□□□□ -1.56
SMG6-210ENST00000572205 GEMIN7Q9H840 131 aaKnown RBP5.31□□□□□ -1.56
SMG6-210ENST00000572205 GAGE2EQ4V326 116 aa5.3□□□□□ -1.56
SMG6-210ENST00000572205 FAM19A5Q7Z5A7 132 aaPredicted RBP5.3□□□□□ -1.56
SMG6-210ENST00000572205 Q8NDZ9 215 aa5.3□□□□□ -1.56
SMG6-210ENST00000572205 COX7B2Q8TF08 81 aa5.3□□□□□ -1.56
SMG6-210ENST00000572205 TOMM7Q9P0U1 55 aa5.3□□□□□ -1.56
SMG6-210ENST00000572205 GAGE2DQ9UEU5 116 aa5.3□□□□□ -1.56
SMG6-210ENST00000572205 TRAV12-1A0A0B4J245 112 aa5.29□□□□□ -1.56
SMG6-210ENST00000572205 SERF1AO75920 110 aa5.29□□□□□ -1.56
SMG6-210ENST00000572205 CXCL5P42830 114 aa5.29□□□□□ -1.56
SMG6-210ENST00000572205 FAM19A2Q8N3H0 131 aa5.29□□□□□ -1.56
SMG6-210ENST00000572205 ZNF625Q96I27 306 aaPredicted RBP5.29□□□□□ -1.56
SMG6-210ENST00000572205 M0QXV9 152 aa5.28□□□□□ -1.56
SMG6-210ENST00000572205 ATP5LO75964 103 aa5.28□□□□□ -1.56
SMG6-210ENST00000572205 RAB5BP61020 215 aa5.28□□□□□ -1.56
SMG6-210ENST00000572205 LINC01600Q96MT4 127 aa5.28□□□□□ -1.56
SMG6-210ENST00000572205 XAGE1AQ9HD64 81 aa5.28□□□□□ -1.56
SMG6-210ENST00000572205 IGLV5-37A0A075B6J1 123 aa5.27□□□□□ -1.57
SMG6-210ENST00000572205 TMEM223A0PJW6 202 aa5.27□□□□□ -1.57
SMG6-210ENST00000572205 PRSS2P07478 247 aa5.27□□□□□ -1.57
SMG6-210ENST00000572205 KRTAP1-4P0C5Y4 121 aa5.27□□□□□ -1.57
SMG6-210ENST00000572205 C6orf226Q5I0X4 101 aa5.27□□□□□ -1.57
SMG6-210ENST00000572205 BAGE3Q86Y29 109 aa5.27□□□□□ -1.57
SMG6-210ENST00000572205 IFI27L1Q96BM0 104 aa5.27□□□□□ -1.57
SMG6-210ENST00000572205 DPH3Q96FX2 82 aa5.27□□□□□ -1.57
SMG6-210ENST00000572205 PACRGQ96M98 296 aaPredicted RBP5.27□□□□□ -1.57
SMG6-210ENST00000572205 TSPEAR-AS2P59090 65 aa5.26□□□□□ -1.57
SMG6-210ENST00000572205 KRTAP10-8P60410 259 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms