RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 S100A8P05109 93 aa3.93□□□□□ -1.78
SMG6-204ENST00000570606 RPL23P62829 140 aaKnown RBP3.93□□□□□ -1.78
SMG6-204ENST00000570606 RPL32P62910 135 aaKnown RBP3.93□□□□□ -1.78
SMG6-204ENST00000570606 TMEM241Q24JQ0 296 aa3.93□□□□□ -1.78
SMG6-204ENST00000570606 FAM74A3Q4VXF1 159 aa3.93□□□□□ -1.78
SMG6-204ENST00000570606 MRPL54Q6P161 138 aaKnown RBP3.93□□□□□ -1.78
SMG6-204ENST00000570606 UNQ6190/PRO20217Q6UXQ8 127 aa3.93□□□□□ -1.78
SMG6-204ENST00000570606 SMDT1Q9H4I9 107 aa3.93□□□□□ -1.78
SMG6-204ENST00000570606 C6orf48Q9UBA6 75 aa3.93□□□□□ -1.78
SMG6-204ENST00000570606 TRBV24-1A0A075B6N3 115 aa3.92□□□□□ -1.78
SMG6-204ENST00000570606 IGHV3OR16-9A0A0B4J2B5 98 aa3.92□□□□□ -1.78
SMG6-204ENST00000570606 A4D1N5 150 aa3.92□□□□□ -1.78
SMG6-204ENST00000570606 C5orf52A6NGY3 159 aa3.92□□□□□ -1.78
SMG6-204ENST00000570606 F8W036 122 aa3.92□□□□□ -1.78
SMG6-204ENST00000570606 TLX1NBP0CAT3 122 aa3.92□□□□□ -1.78
SMG6-204ENST00000570606 IFI27P40305 119 aaPredicted RBP3.92□□□□□ -1.78
SMG6-204ENST00000570606 RPL13AP40429 203 aaKnown RBP3.92□□□□□ -1.78
SMG6-204ENST00000570606 MRPS36P82909 103 aaKnown RBP3.92□□□□□ -1.78
SMG6-204ENST00000570606 PRR4Q16378 134 aa3.92□□□□□ -1.78
SMG6-204ENST00000570606 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
SMG6-204ENST00000570606 PACRGQ96M98 296 aaPredicted RBP3.92□□□□□ -1.78
SMG6-204ENST00000570606 NAT8Q9UHE5 227 aa3.92□□□□□ -1.78
SMG6-204ENST00000570606 IGLV5-45A0A087WSX0 123 aa3.91□□□□□ -1.78
SMG6-204ENST00000570606 TRBV30A0A0K0K1B3 111 aa3.91□□□□□ -1.78
SMG6-204ENST00000570606 SMIM27A0A1W2PRY6 76 aa3.91□□□□□ -1.78
SMG6-204ENST00000570606 NPYP01303 97 aa3.91□□□□□ -1.78
SMG6-204ENST00000570606 RAB5AP20339 215 aa3.91□□□□□ -1.78
SMG6-204ENST00000570606 LBHQ53QV2 105 aaPredicted RBP3.91□□□□□ -1.78
SMG6-204ENST00000570606 KRTAP11-1Q8IUC1 163 aa3.91□□□□□ -1.78
SMG6-204ENST00000570606 IGLV4-3A0A075B6K6 122 aa3.9□□□□□ -1.79
SMG6-204ENST00000570606 NDUFC2-KCTD14E9PQ53 114 aa3.9□□□□□ -1.79
SMG6-204ENST00000570606 PPBPP02775 128 aa3.9□□□□□ -1.79
SMG6-204ENST00000570606 KRTAP1-4P0C5Y4 121 aa3.9□□□□□ -1.79
SMG6-204ENST00000570606 C2orf82Q6UX34 121 aa3.9□□□□□ -1.79
SMG6-204ENST00000570606 TEX43Q6ZNM6 134 aa3.9□□□□□ -1.79
SMG6-204ENST00000570606 ORMDL3Q8N138 153 aa3.9□□□□□ -1.79
SMG6-204ENST00000570606 FAM104AQ969W3 186 aa3.9□□□□□ -1.79
SMG6-204ENST00000570606 TMEM141Q96I45 108 aa3.9□□□□□ -1.79
SMG6-204ENST00000570606 PRELID3AQ96N28 172 aa3.9□□□□□ -1.79
SMG6-204ENST00000570606 C2orf88Q9BSF0 95 aa3.9□□□□□ -1.79
SMG6-204ENST00000570606 TOMM7Q9P0U1 55 aa3.9□□□□□ -1.79
SMG6-204ENST00000570606 A0A1B0GXF2 115 aa3.89□□□□□ -1.79
SMG6-204ENST00000570606 KIAA0087Q14695 138 aa3.89□□□□□ -1.79
SMG6-204ENST00000570606 PEA15Q15121 130 aa3.89□□□□□ -1.79
SMG6-204ENST00000570606 C9orf129Q5T035 196 aaKnown RBP3.89□□□□□ -1.79
SMG6-204ENST00000570606 LINC00242Q5T6M2 205 aa3.89□□□□□ -1.79
SMG6-204ENST00000570606 Q6ZN92 141 aa3.89□□□□□ -1.79
SMG6-204ENST00000570606 PYGO1Q9Y3Y4 419 aa3.89□□□□□ -1.79
SMG6-204ENST00000570606 MUC2Q02817 5179 aa3.88□□□□□ -1.79
SMG6-204ENST00000570606 A0A0U1RQV1 116 aa3.88□□□□□ -1.79
SMG6-204ENST00000570606 LOC389332A0A1B0GUA5 103 aa3.88□□□□□ -1.79
SMG6-204ENST00000570606 CKS1BP61024 79 aa3.88□□□□□ -1.79
SMG6-204ENST00000570606 TMEM136Q6ZRR5 245 aa3.88□□□□□ -1.79
SMG6-204ENST00000570606 ATP5L2Q7Z4Y8 100 aa3.88□□□□□ -1.79
SMG6-204ENST00000570606 KRTAP7-1Q8IUC3 87 aa3.88□□□□□ -1.79
SMG6-204ENST00000570606 LINC00469Q8N7U9 141 aa3.88□□□□□ -1.79
SMG6-204ENST00000570606 MAP1LC3AQ9H492 121 aa3.88□□□□□ -1.79
SMG6-204ENST00000570606 CYSLTR1Q9Y271 337 aa3.88□□□□□ -1.79
SMG6-204ENST00000570606 C9JQL5 133 aa3.87□□□□□ -1.79
SMG6-204ENST00000570606 NUPR1O60356 82 aa3.87□□□□□ -1.79
SMG6-204ENST00000570606 ZNF861PO60384 105 aa3.87□□□□□ -1.79
SMG6-204ENST00000570606 C2orf66Q6UXQ4 117 aa3.87□□□□□ -1.79
SMG6-204ENST00000570606 LINC01561Q8N1V8 128 aa3.87□□□□□ -1.79
SMG6-204ENST00000570606 LAMTOR2Q9Y2Q5 125 aa3.87□□□□□ -1.79
SMG6-204ENST00000570606 CARHSP1Q9Y2V2 147 aaKnown RBP3.87□□□□□ -1.79
SMG6-204ENST00000570606 TSPAN13O95857 204 aa3.86□□□□□ -1.79
SMG6-204ENST00000570606 RPL28P46779 137 aaKnown RBP3.86□□□□□ -1.79
SMG6-204ENST00000570606 C6orf226Q5I0X4 101 aa3.86□□□□□ -1.79
SMG6-204ENST00000570606 ZC2HC1BQ5TFG8 222 aa3.86□□□□□ -1.79
SMG6-204ENST00000570606 Q8IZM0 81 aa3.86□□□□□ -1.79
SMG6-204ENST00000570606 ALKBH7Q9BT30 221 aaPredicted RBP3.86□□□□□ -1.79
SMG6-204ENST00000570606 VCX2Q9H322 139 aa3.86□□□□□ -1.79
SMG6-204ENST00000570606 XAGE1AQ9HD64 81 aa3.86□□□□□ -1.79
SMG6-204ENST00000570606 C22orf24Q9Y442 160 aa3.86□□□□□ -1.79
SMG6-204ENST00000570606 HERVK_113P63121 156 aa3.85□□□□□ -1.79
SMG6-204ENST00000570606 ORMDL2Q53FV1 153 aa3.85□□□□□ -1.79
SMG6-204ENST00000570606 LINC00173Q6ZV60 143 aa3.85□□□□□ -1.79
SMG6-204ENST00000570606 MRPL55Q7Z7F7 128 aaKnown RBP3.85□□□□□ -1.79
SMG6-204ENST00000570606 Q8N8P6 123 aa3.85□□□□□ -1.79
SMG6-204ENST00000570606 AMELXQ99217 191 aa3.85□□□□□ -1.79
SMG6-204ENST00000570606 GEMIN7Q9H840 131 aaKnown RBP3.85□□□□□ -1.79
SMG6-204ENST00000570606 F8VRH5 84 aa3.84□□□□□ -1.79
SMG6-204ENST00000570606 BCE1O60756 84 aa3.84□□□□□ -1.79
SMG6-204ENST00000570606 CRYGAP11844 174 aa3.84□□□□□ -1.79
SMG6-204ENST00000570606 CXCL5P42830 114 aa3.84□□□□□ -1.79
SMG6-204ENST00000570606 SEC11AP67812 179 aa3.84□□□□□ -1.79
SMG6-204ENST00000570606 TYMSOSQ8TAI1 123 aa3.84□□□□□ -1.79
SMG6-204ENST00000570606 TP73-AS1Q9UF72 201 aa3.84□□□□□ -1.79
SMG6-204ENST00000570606 IGKV2D-30A0A075B6S6 120 aa3.83□□□□□ -1.8
SMG6-204ENST00000570606 A0A087X002 238 aa3.83□□□□□ -1.8
SMG6-204ENST00000570606 IGLV9-49A0A0B4J1Y8 123 aa3.83□□□□□ -1.8
SMG6-204ENST00000570606 SMIM29Q86T20 159 aa3.83□□□□□ -1.8
SMG6-204ENST00000570606 NKAPP1Q8N9T2 125 aa3.83□□□□□ -1.8
SMG6-204ENST00000570606 NXT2Q9NPJ8 142 aaKnown RBP3.83□□□□□ -1.8
SMG6-204ENST00000570606 CDKN2A-AS1Q9UH64 79 aa3.83□□□□□ -1.8
SMG6-204ENST00000570606 IGIPA6NJ69 53 aa3.82□□□□□ -1.8
SMG6-204ENST00000570606 RPL37AP8A6NKH3 93 aa3.82□□□□□ -1.8
SMG6-204ENST00000570606 K7EMI3 77 aa3.82□□□□□ -1.8
SMG6-204ENST00000570606 MT-ND4LP03901 98 aa3.82□□□□□ -1.8
SMG6-204ENST00000570606 G0S2P27469 103 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms