RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 GEMIN7Q9H840 131 aaKnown RBP5.1□□□□□ -1.59
CTDNEP1-203ENST00000570385 ANAPC11Q9NYG5 84 aa5.1□□□□□ -1.59
CTDNEP1-203ENST00000570385 LAMTOR2Q9Y2Q5 125 aa5.1□□□□□ -1.59
CTDNEP1-203ENST00000570385 MUC2Q02817 5179 aa5.09□□□□□ -1.59
CTDNEP1-203ENST00000570385 GAGE10A6NGK3 116 aa5.09□□□□□ -1.59
CTDNEP1-203ENST00000570385 ORMDL2Q53FV1 153 aa5.09□□□□□ -1.59
CTDNEP1-203ENST00000570385 LBHQ53QV2 105 aaPredicted RBP5.09□□□□□ -1.59
CTDNEP1-203ENST00000570385 MRPL55Q7Z7F7 128 aaKnown RBP5.09□□□□□ -1.59
CTDNEP1-203ENST00000570385 CARHSP1Q9Y2V2 147 aaKnown RBP5.09□□□□□ -1.59
CTDNEP1-203ENST00000570385 F8VRH5 84 aa5.08□□□□□ -1.6
CTDNEP1-203ENST00000570385 NUPR1O60356 82 aa5.08□□□□□ -1.6
CTDNEP1-203ENST00000570385 MT-ND4LP03901 98 aa5.08□□□□□ -1.6
CTDNEP1-203ENST00000570385 RAB5BP61020 215 aa5.08□□□□□ -1.6
CTDNEP1-203ENST00000570385 HERVK_113P63121 156 aa5.08□□□□□ -1.6
CTDNEP1-203ENST00000570385 KIAA1644Q3SXP7 199 aa5.08□□□□□ -1.6
CTDNEP1-203ENST00000570385 BCE1O60756 84 aa5.07□□□□□ -1.6
CTDNEP1-203ENST00000570385 RPL28P46779 137 aaKnown RBP5.07□□□□□ -1.6
CTDNEP1-203ENST00000570385 TYMSOSQ8TAI1 123 aa5.07□□□□□ -1.6
CTDNEP1-203ENST00000570385 LINC00167Q96N53 147 aa5.07□□□□□ -1.6
CTDNEP1-203ENST00000570385 SMIM1B2RUZ4 78 aa5.06□□□□□ -1.6
CTDNEP1-203ENST00000570385 SCO1O75880 301 aa5.06□□□□□ -1.6
CTDNEP1-203ENST00000570385 SPINK8P0C7L1 97 aa5.06□□□□□ -1.6
CTDNEP1-203ENST00000570385 CRYGAP11844 174 aa5.06□□□□□ -1.6
CTDNEP1-203ENST00000570385 ADCYAP1P18509 176 aa5.06□□□□□ -1.6
CTDNEP1-203ENST00000570385 SEC11AP67812 179 aa5.06□□□□□ -1.6
CTDNEP1-203ENST00000570385 PAPPA-AS1Q5QFB9 102 aa5.06□□□□□ -1.6
CTDNEP1-203ENST00000570385 FAM19A3Q7Z5A8 133 aa5.06□□□□□ -1.6
CTDNEP1-203ENST00000570385 TOMM6Q96B49 74 aa5.06□□□□□ -1.6
CTDNEP1-203ENST00000570385 ANAPC16Q96DE5 110 aa5.06□□□□□ -1.6
CTDNEP1-203ENST00000570385 SCGB3A1Q96QR1 104 aa5.06□□□□□ -1.6
CTDNEP1-203ENST00000570385 RETNLBQ9BQ08 111 aa5.06□□□□□ -1.6
CTDNEP1-203ENST00000570385 NXT2Q9NPJ8 142 aaKnown RBP5.06□□□□□ -1.6
CTDNEP1-203ENST00000570385 K7EMI3 77 aa5.05□□□□□ -1.6
CTDNEP1-203ENST00000570385 NPSP0C0P6 89 aa5.05□□□□□ -1.6
CTDNEP1-203ENST00000570385 PNRC1Q12796 327 aaPredicted RBP5.05□□□□□ -1.6
CTDNEP1-203ENST00000570385 COX7B2Q8TF08 81 aa5.05□□□□□ -1.6
CTDNEP1-203ENST00000570385 TIMM17AQ99595 171 aa5.05□□□□□ -1.6
CTDNEP1-203ENST00000570385 TP73-AS1Q9UF72 201 aa5.05□□□□□ -1.6
CTDNEP1-203ENST00000570385 CXCL5P42830 114 aa5.04□□□□□ -1.6
CTDNEP1-203ENST00000570385 UBE2AP49459 152 aa5.04□□□□□ -1.6
CTDNEP1-203ENST00000570385 ERASQ7Z444 233 aa5.04□□□□□ -1.6
CTDNEP1-203ENST00000570385 IGKV2-28A0A075B6P5 120 aa5.03□□□□□ -1.6
CTDNEP1-203ENST00000570385 TINCRA0A1B0GVN0 87 aa5.03□□□□□ -1.6
CTDNEP1-203ENST00000570385 IGKV2D-28P01615 120 aa5.03□□□□□ -1.6
CTDNEP1-203ENST00000570385 G0S2P27469 103 aa5.03□□□□□ -1.6
CTDNEP1-203ENST00000570385 KRTAP13-2Q52LG2 175 aa5.03□□□□□ -1.6
CTDNEP1-203ENST00000570385 PDZD11Q5EBL8 140 aa5.03□□□□□ -1.6
CTDNEP1-203ENST00000570385 NKAPP1Q8N9T2 125 aa5.03□□□□□ -1.6
CTDNEP1-203ENST00000570385 CST9LQ9H4G1 147 aa5.03□□□□□ -1.6
CTDNEP1-203ENST00000570385 A0A0U1RQV1 116 aa5.02□□□□□ -1.61
CTDNEP1-203ENST00000570385 PFN2P35080 140 aa5.02□□□□□ -1.61
CTDNEP1-203ENST00000570385 RAB14P61106 215 aa5.02□□□□□ -1.61
CTDNEP1-203ENST00000570385 PRLHP81277 87 aa5.02□□□□□ -1.61
CTDNEP1-203ENST00000570385 IGLV5-45A0A087WSX0 123 aa5.01□□□□□ -1.61
CTDNEP1-203ENST00000570385 KRTAP13-1Q8IUC0 172 aa5.01□□□□□ -1.61
CTDNEP1-203ENST00000570385 KRTAP9-2Q9BYQ4 174 aa5.01□□□□□ -1.61
CTDNEP1-203ENST00000570385 IGLV5-37A0A075B6J1 123 aa5□□□□□ -1.61
CTDNEP1-203ENST00000570385 TMEM238C9JI98 176 aa5□□□□□ -1.61
CTDNEP1-203ENST00000570385 ATP5LO75964 103 aa5□□□□□ -1.61
CTDNEP1-203ENST00000570385 NDUFA6P56556 154 aa5□□□□□ -1.61
CTDNEP1-203ENST00000570385 PMVKQ15126 192 aa5□□□□□ -1.61
CTDNEP1-203ENST00000570385 LINC00304Q8N9R0 145 aa5□□□□□ -1.61
CTDNEP1-203ENST00000570385 IGKV2D-26A0A0A0MRZ7 120 aa4.99□□□□□ -1.61
CTDNEP1-203ENST00000570385 FA2HQ7L5A8 372 aa4.99□□□□□ -1.61
CTDNEP1-203ENST00000570385 FAM19A1Q7Z5A9 133 aa4.99□□□□□ -1.61
CTDNEP1-203ENST00000570385 ZNF625Q96I27 306 aaPredicted RBP4.99□□□□□ -1.61
CTDNEP1-203ENST00000570385 CDIP1Q9H305 208 aa4.99□□□□□ -1.61
CTDNEP1-203ENST00000570385 SND1-IT1Q9HBX3 110 aa4.99□□□□□ -1.61
CTDNEP1-203ENST00000570385 FAT4Q6V0I7 4981 aa4.98□□□□□ -1.61
CTDNEP1-203ENST00000570385 IGLV7-46A0A075B6I9 117 aa4.98□□□□□ -1.61
CTDNEP1-203ENST00000570385 H3BRM9 83 aa4.98□□□□□ -1.61
CTDNEP1-203ENST00000570385 VPREB1P12018 145 aa4.98□□□□□ -1.61
CTDNEP1-203ENST00000570385 FAM229BQ4G0N7 80 aa4.98□□□□□ -1.61
CTDNEP1-203ENST00000570385 Q8NDZ9 215 aa4.98□□□□□ -1.61
CTDNEP1-203ENST00000570385 MRPL18Q9H0U6 180 aaKnown RBP4.98□□□□□ -1.61
CTDNEP1-203ENST00000570385 SMCO4Q9NRQ5 59 aa4.98□□□□□ -1.61
CTDNEP1-203ENST00000570385 LINC01546A6NGU7 62 aa4.97□□□□□ -1.61
CTDNEP1-203ENST00000570385 FABP9Q0Z7S8 132 aa4.97□□□□□ -1.61
CTDNEP1-203ENST00000570385 C3orf22Q8N5N4 141 aa4.97□□□□□ -1.61
CTDNEP1-203ENST00000570385 GNB1LQ9BYB4 327 aa4.97□□□□□ -1.61
CTDNEP1-203ENST00000570385 TMEM126AQ9H061 195 aa4.97□□□□□ -1.61
CTDNEP1-203ENST00000570385 ERG28Q9UKR5 140 aa4.97□□□□□ -1.61
CTDNEP1-203ENST00000570385 IGLV5-39A0A0G2JS06 123 aa4.96□□□□□ -1.62
CTDNEP1-203ENST00000570385 TMEM218A2RU14 115 aa4.96□□□□□ -1.62
CTDNEP1-203ENST00000570385 M0R378 163 aa4.96□□□□□ -1.62
CTDNEP1-203ENST00000570385 IGLC3P0DOY3 106 aa4.96□□□□□ -1.62
CTDNEP1-203ENST00000570385 ZNF22P17026 224 aaPredicted RBP4.96□□□□□ -1.62
CTDNEP1-203ENST00000570385 S100PP25815 95 aa4.96□□□□□ -1.62
CTDNEP1-203ENST00000570385 PMCHL1Q16048 86 aa4.96□□□□□ -1.62
CTDNEP1-203ENST00000570385 LCE2AQ5TA79 106 aaPredicted RBP4.96□□□□□ -1.62
CTDNEP1-203ENST00000570385 HIGD2AQ9BW72 106 aa4.96□□□□□ -1.62
CTDNEP1-203ENST00000570385 TRAV9-1A0A075B6T8 112 aa4.95□□□□□ -1.62
CTDNEP1-203ENST00000570385 A0A0U1RRA0 63 aa4.95□□□□□ -1.62
CTDNEP1-203ENST00000570385 LINC01549A6NIU2 74 aa4.95□□□□□ -1.62
CTDNEP1-203ENST00000570385 RPL24P83731 157 aaKnown RBP4.95□□□□□ -1.62
CTDNEP1-203ENST00000570385 CLLU1Q5K131 121 aa4.95□□□□□ -1.62
CTDNEP1-203ENST00000570385 CBLN2Q8IUK8 224 aa4.95□□□□□ -1.62
CTDNEP1-203ENST00000570385 PLEKHB2Q96CS7 222 aa4.95□□□□□ -1.62
CTDNEP1-203ENST00000570385 MUC17Q685J3 4493 aa4.94□□□□□ -1.62
CTDNEP1-203ENST00000570385 A0A096LNJ9 63 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms