RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 SERP1Q9Y6X1 66 aa5.68□□□□□ -1.5
TCF4-246ENST00000570287 TRAV8-3A0A0A6YYJ7 113 aa5.68□□□□□ -1.5
TCF4-246ENST00000570287 RBMY1FQ15415 496 aaKnown RBP5.68□□□□□ -1.5
TCF4-246ENST00000570287 DYNLRB2Q8TF09 96 aa5.68□□□□□ -1.5
TCF4-246ENST00000570287 RBM12B-AS1Q9P1G2 102 aa5.68□□□□□ -1.5
TCF4-246ENST00000570287 IGLV4-3A0A075B6K6 122 aa5.67□□□□□ -1.5
TCF4-246ENST00000570287 IGHV1-58A0A0C4DH39 117 aa5.67□□□□□ -1.5
TCF4-246ENST00000570287 COX7A2LO14548 114 aa5.67□□□□□ -1.5
TCF4-246ENST00000570287 AKAP9Q99996 3911 aa5.67□□□□□ -1.5
TCF4-246ENST00000570287 C20orf203Q8NBC4 194 aa5.67□□□□□ -1.5
TCF4-246ENST00000570287 OPRPNQ99935 248 aaPredicted RBP5.67□□□□□ -1.5
TCF4-246ENST00000570287 APCP25054 2843 aa5.67□□□□□ -1.5
TCF4-246ENST00000570287 SMIM26A0A096LP01 95 aa5.67□□□□□ -1.5
TCF4-246ENST00000570287 A0A0J9YXV3 536 aa5.67□□□□□ -1.5
TCF4-246ENST00000570287 DEFB114Q30KQ6 69 aa5.67□□□□□ -1.5
TCF4-246ENST00000570287 SERP2Q8N6R1 65 aa5.67□□□□□ -1.5
TCF4-246ENST00000570287 IGHV3-64A0A075B6Q5 118 aa5.66□□□□□ -1.5
TCF4-246ENST00000570287 TRBV7-6A0A0J9YX20 115 aa5.66□□□□□ -1.5
TCF4-246ENST00000570287 K7EQD1 137 aa5.66□□□□□ -1.5
TCF4-246ENST00000570287 PAX4O43316 350 aa5.66□□□□□ -1.5
TCF4-246ENST00000570287 PLA2G2AP14555 144 aa5.66□□□□□ -1.5
TCF4-246ENST00000570287 LINC00467Q9BRT7 94 aa5.66□□□□□ -1.5
TCF4-246ENST00000570287 SORL1Q92673 2214 aa5.66□□□□□ -1.5
TCF4-246ENST00000570287 VSIG2Q96IQ7 327 aa5.66□□□□□ -1.5
TCF4-246ENST00000570287 DNAJC9-AS1A6NH13 148 aa5.65□□□□□ -1.5
TCF4-246ENST00000570287 NDUFA12Q9UI09 145 aa5.65□□□□□ -1.5
TCF4-246ENST00000570287 INAFM2P0DMQ5 153 aa5.65□□□□□ -1.5
TCF4-246ENST00000570287 LAMTOR3Q9UHA4 124 aa5.65□□□□□ -1.5
TCF4-246ENST00000570287 ZNF469Q96JG9 3925 aaPredicted RBP5.65□□□□□ -1.51
TCF4-246ENST00000570287 MYO9AB2RTY4 2548 aa5.65□□□□□ -1.51
TCF4-246ENST00000570287 PRSS2P07478 247 aa5.65□□□□□ -1.51
TCF4-246ENST00000570287 HTN1P15515 57 aa5.65□□□□□ -1.51
TCF4-246ENST00000570287 DEFB104AQ8WTQ1 72 aa5.65□□□□□ -1.51
TCF4-246ENST00000570287 TM2D3Q9BRN9 247 aa5.65□□□□□ -1.51
TCF4-246ENST00000570287 NBPF19A0A087WUL8 3843 aa5.64□□□□□ -1.51
TCF4-246ENST00000570287 ITPR3Q14573 2671 aa5.64□□□□□ -1.51
TCF4-246ENST00000570287 INSP01308 110 aa5.64□□□□□ -1.51
TCF4-246ENST00000570287 Q6JHZ5 121 aa5.64□□□□□ -1.51
TCF4-246ENST00000570287 OBSCN-AS1Q96MR7 158 aa5.64□□□□□ -1.51
TCF4-246ENST00000570287 C8orf87E5RJ46 101 aa5.63□□□□□ -1.51
TCF4-246ENST00000570287 IGHV3OR16-12A0A075B7B8 117 aa5.63□□□□□ -1.51
TCF4-246ENST00000570287 NDUFA1O15239 70 aa5.63□□□□□ -1.51
TCF4-246ENST00000570287 C11orf72Q8NBR9 251 aa5.63□□□□□ -1.51
TCF4-246ENST00000570287 IGHV3-73A0A0B4J1V6 119 aa5.62□□□□□ -1.51
TCF4-246ENST00000570287 BAALC-AS2P0C853 105 aa5.62□□□□□ -1.51
TCF4-246ENST00000570287 NPC2P61916 151 aa5.62□□□□□ -1.51
TCF4-246ENST00000570287 CD28P10747 220 aa5.61□□□□□ -1.51
TCF4-246ENST00000570287 LINC00308Q8TCZ7 52 aa5.61□□□□□ -1.51
TCF4-246ENST00000570287 PRM2P04554 102 aa5.61□□□□□ -1.51
TCF4-246ENST00000570287 TLN2Q9Y4G6 2542 aa5.61□□□□□ -1.51
TCF4-246ENST00000570287 RPL37AP8A6NKH3 93 aa5.61□□□□□ -1.51
TCF4-246ENST00000570287 IGHV3-53P01767 116 aa5.61□□□□□ -1.51
TCF4-246ENST00000570287 KRTAP1-1Q07627 177 aa5.61□□□□□ -1.51
TCF4-246ENST00000570287 ANK3Q12955 4377 aaKnown RBP5.6□□□□□ -1.51
TCF4-246ENST00000570287 NACAE9PAV3 2078 aa5.6□□□□□ -1.51
TCF4-246ENST00000570287 CMC4P56277 68 aaPredicted RBP5.6□□□□□ -1.51
TCF4-246ENST00000570287 FHL2Q14192 279 aa5.6□□□□□ -1.51
TCF4-246ENST00000570287 XCL2Q9UBD3 114 aa5.6□□□□□ -1.51
TCF4-246ENST00000570287 FLNAP21333 2647 aaKnown RBP5.6□□□□□ -1.51
TCF4-246ENST00000570287 LINC01006Q8NI28 216 aa5.59□□□□□ -1.51
TCF4-246ENST00000570287 TENM4Q6N022 2769 aa5.59□□□□□ -1.51
TCF4-246ENST00000570287 PLAC8L1A1L4L8 177 aa5.59□□□□□ -1.51
TCF4-246ENST00000570287 COPS9Q8WXC6 57 aa5.59□□□□□ -1.51
TCF4-246ENST00000570287 UBE2D4Q9Y2X8 147 aa5.59□□□□□ -1.51
TCF4-246ENST00000570287 CHD6Q8TD26 2715 aa5.59□□□□□ -1.51
TCF4-246ENST00000570287 CHCHD7Q9BUK0 85 aa5.59□□□□□ -1.52
TCF4-246ENST00000570287 SONP18583 2426 aaKnown RBP5.58□□□□□ -1.52
TCF4-246ENST00000570287 SOSTDC1Q6X4U4 206 aa5.58□□□□□ -1.52
TCF4-246ENST00000570287 PDZD2O15018 2839 aa5.58□□□□□ -1.52
TCF4-246ENST00000570287 RPL28P46779 137 aaKnown RBP5.57□□□□□ -1.52
TCF4-246ENST00000570287 LINC00846Q9NV44 126 aa5.57□□□□□ -1.52
TCF4-246ENST00000570287 FASNP49327 2511 aaKnown RBP5.57□□□□□ -1.52
TCF4-246ENST00000570287 CIRBPQ14011 172 aaKnown RBP5.57□□□□□ -1.52
TCF4-246ENST00000570287 CCDC168Q8NDH2 2452 aa5.57□□□□□ -1.52
TCF4-246ENST00000570287 FAM19A3Q7Z5A8 133 aa5.57□□□□□ -1.52
TCF4-246ENST00000570287 KTN1-AS1Q86SY8 53 aa5.57□□□□□ -1.52
TCF4-246ENST00000570287 A0A087WVE0 104 aa5.56□□□□□ -1.52
TCF4-246ENST00000570287 DNAL4O96015 105 aa5.56□□□□□ -1.52
TCF4-246ENST00000570287 NF1P21359 2839 aa5.56□□□□□ -1.52
TCF4-246ENST00000570287 TRGV1A0A0A0MS02 117 aa5.56□□□□□ -1.52
TCF4-246ENST00000570287 SS18Q15532 418 aa5.56□□□□□ -1.52
TCF4-246ENST00000570287 LYPD5Q6UWN5 251 aa5.56□□□□□ -1.52
TCF4-246ENST00000570287 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.55□□□□□ -1.52
TCF4-246ENST00000570287 TRBV10-1A0A0K0K1A3 114 aa5.55□□□□□ -1.52
TCF4-246ENST00000570287 IGKV2-29A2NJV5 120 aaPredicted RBP5.55□□□□□ -1.52
TCF4-246ENST00000570287 IGLV1-51P01701 117 aa5.55□□□□□ -1.52
TCF4-246ENST00000570287 C9orf129Q5T035 196 aaKnown RBP5.55□□□□□ -1.52
TCF4-246ENST00000570287 IGKV3D-7A0A0C4DH55 119 aa5.55□□□□□ -1.52
TCF4-246ENST00000570287 ATP5EP2Q5VTU8 51 aa5.55□□□□□ -1.52
TCF4-246ENST00000570287 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.55□□□□□ -1.52
TCF4-246ENST00000570287 ZNF625Q96I27 306 aaPredicted RBP5.55□□□□□ -1.52
TCF4-246ENST00000570287 WNK1Q9H4A3 2382 aa5.54□□□□□ -1.52
TCF4-246ENST00000570287 CUBNO60494 3623 aa5.54□□□□□ -1.52
TCF4-246ENST00000570287 CDKN2A-AS1Q9UH64 79 aa5.54□□□□□ -1.52
TCF4-246ENST00000570287 CYSRT1A8MQ03 144 aa5.54□□□□□ -1.52
TCF4-246ENST00000570287 GIG44P09565 113 aaPredicted RBP5.54□□□□□ -1.52
TCF4-246ENST00000570287 RPL36AP83881 106 aaKnown RBP5.54□□□□□ -1.52
TCF4-246ENST00000570287 RNASE13Q5GAN3 156 aaKnown RBP5.54□□□□□ -1.52
TCF4-246ENST00000570287 RPL36ALQ969Q0 106 aaKnown RBP5.54□□□□□ -1.52
TCF4-246ENST00000570287 BCE1O60756 84 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms