RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 KRTAP10-11P60412 298 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 UBE2V1Q13404 147 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 MIAQ16674 131 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 KPRPQ5T749 579 aaPredicted RBP4.22□□□□□ -1.73
CYLD-216ENST00000569891 Q9H8V8 135 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 PGPEP1Q9NXJ5 209 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 A0A087WZ39 114 aa4.21□□□□□ -1.73
CYLD-216ENST00000569891 G3V4G9 280 aa4.21□□□□□ -1.73
CYLD-216ENST00000569891 H3BUT2 72 aa4.21□□□□□ -1.73
CYLD-216ENST00000569891 REG3AQ06141 175 aa4.21□□□□□ -1.73
CYLD-216ENST00000569891 MAPKAPK5-AS1Q8N8E1 139 aa4.21□□□□□ -1.73
CYLD-216ENST00000569891 PRO1854Q9UHT4 67 aa4.21□□□□□ -1.73
CYLD-216ENST00000569891 SPCS1Q9Y6A9 102 aa4.21□□□□□ -1.74
CYLD-216ENST00000569891 IBA57-AS1B1ANH7 110 aa4.21□□□□□ -1.74
CYLD-216ENST00000569891 TAX1BP3O14907 124 aa4.21□□□□□ -1.74
CYLD-216ENST00000569891 Q8IZM0 81 aa4.21□□□□□ -1.74
CYLD-216ENST00000569891 PKIGQ9Y2B9 76 aa4.21□□□□□ -1.74
CYLD-216ENST00000569891 TRAV13-2A0A0B4J235 113 aa4.2□□□□□ -1.74
CYLD-216ENST00000569891 A0A0J9YWU9 116 aa4.2□□□□□ -1.74
CYLD-216ENST00000569891 A0A1W2PPM0 123 aa4.2□□□□□ -1.74
CYLD-216ENST00000569891 SMIM1B2RUZ4 78 aa4.2□□□□□ -1.74
CYLD-216ENST00000569891 CELA1Q9UNI1 258 aa4.2□□□□□ -1.74
CYLD-216ENST00000569891 A0A1B0GWB2 263 aa4.2□□□□□ -1.74
CYLD-216ENST00000569891 FXYD2P54710 66 aa4.2□□□□□ -1.74
CYLD-216ENST00000569891 LINC00158P58513 81 aa4.2□□□□□ -1.74
CYLD-216ENST00000569891 COX17Q14061 63 aa4.2□□□□□ -1.74
CYLD-216ENST00000569891 SPATA3Q8NHX4 192 aa4.2□□□□□ -1.74
CYLD-216ENST00000569891 MRAPQ8TCY5 172 aa4.2□□□□□ -1.74
CYLD-216ENST00000569891 TM2D3Q9BRN9 247 aa4.2□□□□□ -1.74
CYLD-216ENST00000569891 KLK5Q9Y337 293 aaPredicted RBP4.2□□□□□ -1.74
CYLD-216ENST00000569891 A0A096LPF7 62 aa4.19□□□□□ -1.74
CYLD-216ENST00000569891 TRAV8-3A0A0A6YYJ7 113 aa4.19□□□□□ -1.74
CYLD-216ENST00000569891 C1orf43Q9BWL3 253 aa4.19□□□□□ -1.74
CYLD-216ENST00000569891 NACAE9PAV3 2078 aa4.19□□□□□ -1.74
CYLD-216ENST00000569891 IGHV3-30P01768 117 aa4.19□□□□□ -1.74
CYLD-216ENST00000569891 IGHV3-30-5P0DP03 117 aa4.19□□□□□ -1.74
CYLD-216ENST00000569891 XCL1P47992 114 aa4.19□□□□□ -1.74
CYLD-216ENST00000569891 CHCHD10Q8WYQ3 142 aaPredicted RBP4.19□□□□□ -1.74
CYLD-216ENST00000569891 TTTY13Q9BZ97 58 aa4.19□□□□□ -1.74
CYLD-216ENST00000569891 LOC107984156A0A0G2JMH3 177 aa4.19□□□□□ -1.74
CYLD-216ENST00000569891 K7EP34 96 aa4.19□□□□□ -1.74
CYLD-216ENST00000569891 LYPD5Q6UWN5 251 aa4.19□□□□□ -1.74
CYLD-216ENST00000569891 ARL17AQ8IVW1 177 aa4.19□□□□□ -1.74
CYLD-216ENST00000569891 LINC00269Q8N2A0 174 aa4.19□□□□□ -1.74
CYLD-216ENST00000569891 NBEAL2Q6ZNJ1 2754 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 Q9UF83 564 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 IGLV4-60A0A075B6I1 120 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 IGHV3OR16-9A0A0B4J2B5 98 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 IGLL5B9A064 214 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 ZNF561-AS1K7EIQ3 104 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 GHRHP01286 108 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 Q6ZTC4 211 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 MUSTN1Q8IVN3 82 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 LRP1Q07954 4544 aaKnown RBP4.18□□□□□ -1.74
CYLD-216ENST00000569891 MUC2Q02817 5179 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 C5orf38Q86SI9 138 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 A4D1N5 150 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 CFC1BP0CG36 223 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 CFC1P0CG37 223 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 UBE2DNLQ8IWF7 75 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 UBE2WQ96B02 151 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 KLK12Q9UKR0 248 aa4.18□□□□□ -1.74
CYLD-216ENST00000569891 K7ERU9 68 aa4.17□□□□□ -1.74
CYLD-216ENST00000569891 B9D2Q9BPU9 175 aa4.17□□□□□ -1.74
CYLD-216ENST00000569891 SETD2Q9BYW2 2564 aaPredicted RBP4.17□□□□□ -1.74
CYLD-216ENST00000569891 TSPEAR-AS2P59090 65 aa4.17□□□□□ -1.74
CYLD-216ENST00000569891 ATXN8Q156A1 80 aa4.17□□□□□ -1.74
CYLD-216ENST00000569891 LINC01556Q5JQF7 62 aa4.17□□□□□ -1.74
CYLD-216ENST00000569891 RETNQ9HD89 108 aa4.17□□□□□ -1.74
CYLD-216ENST00000569891 F8W1H4 67 aa4.17□□□□□ -1.74
CYLD-216ENST00000569891 JMJD1CQ15652 2540 aa4.17□□□□□ -1.74
CYLD-216ENST00000569891 NANOS2P60321 138 aaKnown RBP4.16□□□□□ -1.74
CYLD-216ENST00000569891 COX6A2Q02221 97 aa4.16□□□□□ -1.74
CYLD-216ENST00000569891 LINC00528Q8N1L1 170 aa4.16□□□□□ -1.74
CYLD-216ENST00000569891 GAGE12HA6NDE8 117 aa4.16□□□□□ -1.74
CYLD-216ENST00000569891 NUPR2A6NF83 97 aa4.16□□□□□ -1.74
CYLD-216ENST00000569891 SPAG11BQ08648 103 aa4.16□□□□□ -1.74
CYLD-216ENST00000569891 HERC1Q15751 4861 aa4.16□□□□□ -1.74
CYLD-216ENST00000569891 K7EIL1 84 aa4.16□□□□□ -1.74
CYLD-216ENST00000569891 LINC00308Q8TCZ7 52 aa4.16□□□□□ -1.74
CYLD-216ENST00000569891 ZNF625Q96I27 306 aaPredicted RBP4.16□□□□□ -1.74
CYLD-216ENST00000569891 IGHV3-33P01772 117 aa4.15□□□□□ -1.74
CYLD-216ENST00000569891 TTC32Q5I0X7 151 aa4.15□□□□□ -1.74
CYLD-216ENST00000569891 PRR34Q9NV39 138 aa4.15□□□□□ -1.74
CYLD-216ENST00000569891 C14orf177Q52M58 125 aa4.15□□□□□ -1.75
CYLD-216ENST00000569891 CLPSL2Q6UWE3 100 aa4.15□□□□□ -1.75
CYLD-216ENST00000569891 FAM104AQ969W3 186 aa4.15□□□□□ -1.75
CYLD-216ENST00000569891 TRBV30A0A0K0K1B3 111 aa4.15□□□□□ -1.75
CYLD-216ENST00000569891 C2orf48Q96LS8 159 aa4.15□□□□□ -1.75
CYLD-216ENST00000569891 SND1-IT1Q9HBX3 110 aa4.15□□□□□ -1.75
CYLD-216ENST00000569891 H0YGX0 51 aa4.14□□□□□ -1.75
CYLD-216ENST00000569891 IGKV2D-24A0A075B6R9 120 aa4.14□□□□□ -1.75
CYLD-216ENST00000569891 H3BQ85 93 aa4.14□□□□□ -1.75
CYLD-216ENST00000569891 H7C2G1 150 aa4.14□□□□□ -1.75
CYLD-216ENST00000569891 K7ERJ3 54 aa4.14□□□□□ -1.75
CYLD-216ENST00000569891 MIR7-3HGQ8N6C7 128 aa4.14□□□□□ -1.75
CYLD-216ENST00000569891 FAT1Q14517 4588 aa4.13□□□□□ -1.75
CYLD-216ENST00000569891 DNAH10OSP0CZ25 163 aa4.13□□□□□ -1.75
CYLD-216ENST00000569891 NDUFC2O95298 119 aa4.13□□□□□ -1.75
CYLD-216ENST00000569891 TSPAN13O95857 204 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms