RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 OTOGLQ3ZCN5 2332 aa2.23□□□□□ -2.05
CHD9-220ENST00000569794 BRWD1Q9NSI6 2320 aa2.23□□□□□ -2.05
CHD9-220ENST00000569794 EML5Q05BV3 1969 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 TRAV22A0A0B4J277 110 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 M0R2N4 97 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 MRPS14O60783 128 aaKnown RBP2.22□□□□□ -2.05
CHD9-220ENST00000569794 COX6CP09669 75 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 ELOF1P60002 83 aaKnown RBP2.22□□□□□ -2.05
CHD9-220ENST00000569794 ADIRFQ15847 76 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 Q8N6K4 173 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 COX7B2Q8TF08 81 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 PPP1R1CQ8WVI7 109 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 FAM167A-AS1Q96KT0 104 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 DYNLRB1Q9NP97 96 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 MED9Q9NWA0 146 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 RABAC1Q9UI14 185 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 DNHD1Q96M86 4753 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 VPS13AQ96RL7 3174 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 PLIN4Q96Q06 1357 aa2.22□□□□□ -2.05
CHD9-220ENST00000569794 HEATR1Q9H583 2144 aaKnown RBP2.21□□□□□ -2.06
CHD9-220ENST00000569794 ARFGEF2Q9Y6D5 1785 aa2.21□□□□□ -2.06
CHD9-220ENST00000569794 MYOFQ9NZM1 2061 aa2.21□□□□□ -2.06
CHD9-220ENST00000569794 TRBV6-7A0A0A0MS04 114 aa2.21□□□□□ -2.06
CHD9-220ENST00000569794 IGKV2-29A2NJV5 120 aaPredicted RBP2.21□□□□□ -2.06
CHD9-220ENST00000569794 ANK1P16157 1881 aa2.21□□□□□ -2.06
CHD9-220ENST00000569794 CCL3L1P16619 93 aa2.21□□□□□ -2.06
CHD9-220ENST00000569794 ZNF625Q96I27 306 aaPredicted RBP2.21□□□□□ -2.06
CHD9-220ENST00000569794 ASXL3Q9C0F0 2248 aa2.21□□□□□ -2.06
CHD9-220ENST00000569794 BAZ2BQ9UIF8 2168 aaKnown RBP2.2□□□□□ -2.06
CHD9-220ENST00000569794 NBPF19A0A087WUL8 3843 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 PLXNA1Q9UIW2 1896 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 NBEAL1Q6ZS30 2694 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 LTBP2Q14767 1821 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 UNC13CQ8NB66 2214 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 FRYLO94915 3013 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 IGLC7A0M8Q6 106 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 CLPSL1A2RUU4 121 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 FXYD1O00168 92 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 UBE2D3P61077 147 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 UBE2D2P62837 147 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 FXYD3Q14802 87 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 GDF5OSQ5U4N7 250 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 NDUFA4L2Q9NRX3 87 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 LENEPQ9Y5L5 61 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 SPCS1Q9Y6A9 102 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 MPDZO75970 2070 aa2.2□□□□□ -2.06
CHD9-220ENST00000569794 DUOX1Q9NRD9 1551 aa2.19□□□□□ -2.06
CHD9-220ENST00000569794 PHIPQ8WWQ0 1821 aa2.19□□□□□ -2.06
CHD9-220ENST00000569794 ABCA2Q9BZC7 2435 aa2.19□□□□□ -2.06
CHD9-220ENST00000569794 LOC110117498A0A087WWA1 95 aa2.19□□□□□ -2.06
CHD9-220ENST00000569794 HCRTO43612 131 aa2.19□□□□□ -2.06
CHD9-220ENST00000569794 SPAG11BQ08648 103 aa2.19□□□□□ -2.06
CHD9-220ENST00000569794 TMEM170BQ5T4T1 132 aa2.19□□□□□ -2.06
CHD9-220ENST00000569794 Q5VV11 94 aa2.19□□□□□ -2.06
CHD9-220ENST00000569794 XAF1Q6GPH4 301 aa2.19□□□□□ -2.06
CHD9-220ENST00000569794 SPAG11AQ6PDA7 123 aa2.19□□□□□ -2.06
CHD9-220ENST00000569794 CYSTM1Q9H1C7 97 aa2.19□□□□□ -2.06
CHD9-220ENST00000569794 TNRC6AQ8NDV7 1962 aaKnown RBP2.19□□□□□ -2.06
CHD9-220ENST00000569794 DMXL2Q8TDJ6 3036 aa2.19□□□□□ -2.06
CHD9-220ENST00000569794 DOCK10Q96BY6 2186 aa2.19□□□□□ -2.06
CHD9-220ENST00000569794 MUC22E2RYF6 1773 aaPredicted RBP2.18□□□□□ -2.06
CHD9-220ENST00000569794 IGKV2-40A0A087WW87 121 aaPredicted RBP2.18□□□□□ -2.06
CHD9-220ENST00000569794 IGKV3D-7A0A0C4DH55 119 aa2.18□□□□□ -2.06
CHD9-220ENST00000569794 IGKV3OR2-268A0A0C4DH90 116 aa2.18□□□□□ -2.06
CHD9-220ENST00000569794 NBDYA0A0U1RRE5 68 aa2.18□□□□□ -2.06
CHD9-220ENST00000569794 LOC285095A0A1B0GVY8 99 aa2.18□□□□□ -2.06
CHD9-220ENST00000569794 IGKV2D-40P01614 121 aaPredicted RBP2.18□□□□□ -2.06
CHD9-220ENST00000569794 BPESC1Q9GZL8 116 aa2.18□□□□□ -2.06
CHD9-220ENST00000569794 ST20Q9HBF5 79 aa2.18□□□□□ -2.06
CHD9-220ENST00000569794 V9GYH0 126 aa2.18□□□□□ -2.06
CHD9-220ENST00000569794 V9GYV3 84 aa2.18□□□□□ -2.06
CHD9-220ENST00000569794 LOC400499M0QZD8 3231 aa2.18□□□□□ -2.06
CHD9-220ENST00000569794 RTTNQ86VV8 2226 aa2.18□□□□□ -2.06
CHD9-220ENST00000569794 PCNX1Q96RV3 2341 aa2.18□□□□□ -2.06
CHD9-220ENST00000569794 AKAP13Q12802 2813 aa2.18□□□□□ -2.06
CHD9-220ENST00000569794 PTPRQQ9UMZ3 2332 aa2.17□□□□□ -2.06
CHD9-220ENST00000569794 TLN1Q9Y490 2541 aaKnown RBP2.17□□□□□ -2.06
CHD9-220ENST00000569794 HMGN4O00479 90 aa2.17□□□□□ -2.06
CHD9-220ENST00000569794 SMIM11AP58511 58 aa2.17□□□□□ -2.06
CHD9-220ENST00000569794 PMCHL1Q16048 86 aa2.17□□□□□ -2.06
CHD9-220ENST00000569794 C5orf56Q8N8D9 126 aa2.17□□□□□ -2.06
CHD9-220ENST00000569794 LINC00208Q96KT6 92 aa2.17□□□□□ -2.06
CHD9-220ENST00000569794 R4GMQ9 66 aa2.17□□□□□ -2.06
CHD9-220ENST00000569794 RGPD2P0DJD1 1756 aa2.17□□□□□ -2.06
CHD9-220ENST00000569794 NINQ8N4C6 2090 aa2.16□□□□□ -2.06
CHD9-220ENST00000569794 PLXNA2O75051 1894 aa2.16□□□□□ -2.06
CHD9-220ENST00000569794 TMEM14DPA8MWL7 114 aa2.16□□□□□ -2.06
CHD9-220ENST00000569794 H7BZZ5 65 aa2.16□□□□□ -2.06
CHD9-220ENST00000569794 ETDBQ3ZM63 59 aa2.16□□□□□ -2.06
CHD9-220ENST00000569794 VMO1Q7Z5L0 202 aa2.16□□□□□ -2.06
CHD9-220ENST00000569794 CDC42SE2Q9NRR3 84 aa2.16□□□□□ -2.06
CHD9-220ENST00000569794 HIGD1BQ9P298 99 aa2.16□□□□□ -2.06
CHD9-220ENST00000569794 CELSR3Q9NYQ7 3312 aa2.16□□□□□ -2.06
CHD9-220ENST00000569794 ALPK2Q86TB3 2170 aa2.16□□□□□ -2.06
CHD9-220ENST00000569794 MED13Q9UHV7 2174 aa2.16□□□□□ -2.06
CHD9-220ENST00000569794 LRRK2Q5S007 2527 aa2.16□□□□□ -2.06
CHD9-220ENST00000569794 FBN1P35555 2871 aaKnown RBP2.16□□□□□ -2.06
CHD9-220ENST00000569794 SNRNP200O75643 2136 aaKnown RBP2.15□□□□□ -2.06
CHD9-220ENST00000569794 MED12LQ86YW9 2145 aa2.15□□□□□ -2.06
CHD9-220ENST00000569794 FN1P02751 2386 aaKnown RBP2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms