RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 A0A0B4J2C4 111 aa10.63□□□□□ -0.71
SNX20-204ENST00000568993 PRSS2P07478 247 aa10.63□□□□□ -0.71
SNX20-204ENST00000568993 NANOS2P60321 138 aaKnown RBP10.63□□□□□ -0.71
SNX20-204ENST00000568993 REG3AQ06141 175 aa10.63□□□□□ -0.71
SNX20-204ENST00000568993 C5orf38Q86SI9 138 aa10.63□□□□□ -0.71
SNX20-204ENST00000568993 XCL1P47992 114 aa10.62□□□□□ -0.71
SNX20-204ENST00000568993 Q8N3U1 123 aa10.62□□□□□ -0.71
SNX20-204ENST00000568993 PRO1854Q9UHT4 67 aa10.62□□□□□ -0.71
SNX20-204ENST00000568993 EIF4EBP3O60516 100 aaPredicted RBP10.62□□□□□ -0.71
SNX20-204ENST00000568993 CD164L2Q6UWJ8 174 aa10.62□□□□□ -0.71
SNX20-204ENST00000568993 DEFB131BA0A096LNP1 70 aa10.61□□□□□ -0.71
SNX20-204ENST00000568993 CLPSL2Q6UWE3 100 aa10.61□□□□□ -0.71
SNX20-204ENST00000568993 PRR34Q9NV39 138 aa10.61□□□□□ -0.71
SNX20-204ENST00000568993 ETDBQ3ZM63 59 aa10.6□□□□□ -0.71
SNX20-204ENST00000568993 DEFB121Q5J5C9 76 aa10.6□□□□□ -0.71
SNX20-204ENST00000568993 SFTA2Q6UW10 78 aa10.6□□□□□ -0.71
SNX20-204ENST00000568993 MRAPQ8TCY5 172 aa10.6□□□□□ -0.71
SNX20-204ENST00000568993 NDUFV3P56181 108 aaKnown RBP10.6□□□□□ -0.71
SNX20-204ENST00000568993 CHCHD10Q8WYQ3 142 aaPredicted RBP10.59□□□□□ -0.71
SNX20-204ENST00000568993 COPS9Q8WXC6 57 aa10.58□□□□□ -0.72
SNX20-204ENST00000568993 TOMM7Q9P0U1 55 aa10.58□□□□□ -0.72
SNX20-204ENST00000568993 MEIG1Q5JSS6 88 aa10.58□□□□□ -0.72
SNX20-204ENST00000568993 Q8IZM0 81 aa10.58□□□□□ -0.72
SNX20-204ENST00000568993 LINC00308Q8TCZ7 52 aa10.58□□□□□ -0.72
SNX20-204ENST00000568993 IGHV3-33P01772 117 aa10.57□□□□□ -0.72
SNX20-204ENST00000568993 FOXI1Q12951 378 aa10.57□□□□□ -0.72
SNX20-204ENST00000568993 DAND5Q8N907 189 aa10.57□□□□□ -0.72
SNX20-204ENST00000568993 COX7A2LO14548 114 aa10.57□□□□□ -0.72
SNX20-204ENST00000568993 TRAV10A0A0B4J240 114 aa10.56□□□□□ -0.72
SNX20-204ENST00000568993 ESRGQ1W209 222 aa10.56□□□□□ -0.72
SNX20-204ENST00000568993 KLK12Q9UKR0 248 aa10.56□□□□□ -0.72
SNX20-204ENST00000568993 C6orf226Q5I0X4 101 aa10.55□□□□□ -0.72
SNX20-204ENST00000568993 ENHOQ6UWT2 76 aa10.55□□□□□ -0.72
SNX20-204ENST00000568993 PRO0461Q9UI25 63 aa10.55□□□□□ -0.72
SNX20-204ENST00000568993 HUWE1Q7Z6Z7 4374 aaKnown RBP10.55□□□□□ -0.72
SNX20-204ENST00000568993 IBA57-AS1B1ANH7 110 aa10.55□□□□□ -0.72
SNX20-204ENST00000568993 IGLV10-54A0A075B6I4 117 aa10.54□□□□□ -0.72
SNX20-204ENST00000568993 NPC2P61916 151 aa10.54□□□□□ -0.72
SNX20-204ENST00000568993 WFDC10BQ8IUB3 73 aa10.54□□□□□ -0.72
SNX20-204ENST00000568993 TRAV8-4A0A0B4J246 113 aa10.53□□□□□ -0.72
SNX20-204ENST00000568993 A0A0U1RRA0 63 aa10.53□□□□□ -0.72
SNX20-204ENST00000568993 KIAA0087Q14695 138 aa10.53□□□□□ -0.72
SNX20-204ENST00000568993 LYRM7Q5U5X0 104 aa10.53□□□□□ -0.72
SNX20-204ENST00000568993 SOSTDC1Q6X4U4 206 aa10.53□□□□□ -0.72
SNX20-204ENST00000568993 C15orf53Q8NAA6 179 aa10.53□□□□□ -0.72
SNX20-204ENST00000568993 FAM19A5Q7Z5A7 132 aaPredicted RBP10.52□□□□□ -0.73
SNX20-204ENST00000568993 OR13C6PQ8NH95 151 aa10.52□□□□□ -0.73
SNX20-204ENST00000568993 KLK5Q9Y337 293 aaPredicted RBP10.51□□□□□ -0.73
SNX20-204ENST00000568993 LOC107984156A0A0G2JMH3 177 aa10.51□□□□□ -0.73
SNX20-204ENST00000568993 MALP21145 153 aa10.51□□□□□ -0.73
SNX20-204ENST00000568993 CXCL5P42830 114 aa10.51□□□□□ -0.73
SNX20-204ENST00000568993 ARL17AQ8IVW1 177 aa10.51□□□□□ -0.73
SNX20-204ENST00000568993 Q6Q795 121 aa10.5□□□□□ -0.73
SNX20-204ENST00000568993 MIR7-3HGQ8N6C7 128 aa10.5□□□□□ -0.73
SNX20-204ENST00000568993 CRPP02741 224 aa10.5□□□□□ -0.73
SNX20-204ENST00000568993 LINC01556Q5JQF7 62 aa10.5□□□□□ -0.73
SNX20-204ENST00000568993 TRBV20-1A0A075B6N2 111 aa10.49□□□□□ -0.73
SNX20-204ENST00000568993 H3BMG7 143 aa10.49□□□□□ -0.73
SNX20-204ENST00000568993 J3KT08 172 aa10.49□□□□□ -0.73
SNX20-204ENST00000568993 LINC00158P58513 81 aa10.49□□□□□ -0.73
SNX20-204ENST00000568993 TRBV30A0A0K0K1B3 111 aa10.48□□□□□ -0.73
SNX20-204ENST00000568993 A0A1B0GX51 115 aa10.48□□□□□ -0.73
SNX20-204ENST00000568993 TTC32Q5I0X7 151 aa10.48□□□□□ -0.73
SNX20-204ENST00000568993 UBE2WQ96B02 151 aa10.48□□□□□ -0.73
SNX20-204ENST00000568993 SEC61GP60059 68 aa10.48□□□□□ -0.73
SNX20-204ENST00000568993 GAGE2BQ13066 116 aa10.48□□□□□ -0.73
SNX20-204ENST00000568993 GAGE2EQ4V326 116 aa10.48□□□□□ -0.73
SNX20-204ENST00000568993 GAGE2DQ9UEU5 116 aa10.48□□□□□ -0.73
SNX20-204ENST00000568993 C2orf82Q6UX34 121 aa10.47□□□□□ -0.73
SNX20-204ENST00000568993 LOC107984640A0A0U1RRK4 108 aa10.46□□□□□ -0.73
SNX20-204ENST00000568993 H7C2G1 150 aa10.46□□□□□ -0.73
SNX20-204ENST00000568993 COX17Q14061 63 aa10.46□□□□□ -0.73
SNX20-204ENST00000568993 KRTAP26-1Q6PEX3 210 aa10.46□□□□□ -0.73
SNX20-204ENST00000568993 C9JAW5 83 aa10.46□□□□□ -0.74
SNX20-204ENST00000568993 DNAH10OSP0CZ25 163 aa10.46□□□□□ -0.74
SNX20-204ENST00000568993 SCGB1C2P0DMR2 95 aa10.46□□□□□ -0.74
SNX20-204ENST00000568993 PSMB2P49721 201 aa10.46□□□□□ -0.74
SNX20-204ENST00000568993 Q1RN00 199 aa10.46□□□□□ -0.74
SNX20-204ENST00000568993 B9D2Q9BPU9 175 aa10.46□□□□□ -0.74
SNX20-204ENST00000568993 TCL1BO95988 128 aa10.45□□□□□ -0.74
SNX20-204ENST00000568993 PFN2P35080 140 aa10.45□□□□□ -0.74
SNX20-204ENST00000568993 RPL13AP40429 203 aaKnown RBP10.45□□□□□ -0.74
SNX20-204ENST00000568993 CCL18P55774 89 aa10.45□□□□□ -0.74
SNX20-204ENST00000568993 RPS28P62857 69 aaKnown RBP10.45□□□□□ -0.74
SNX20-204ENST00000568993 TRIAP1O43715 76 aa10.44□□□□□ -0.74
SNX20-204ENST00000568993 DNAH9Q9NYC9 4486 aa10.44□□□□□ -0.74
SNX20-204ENST00000568993 SPAG11BQ08648 103 aa10.43□□□□□ -0.74
SNX20-204ENST00000568993 SND1-IT1Q9HBX3 110 aa10.43□□□□□ -0.74
SNX20-204ENST00000568993 LINC00588Q9Y4M8 146 aa10.43□□□□□ -0.74
SNX20-204ENST00000568993 PPDPFLQ8WWR9 84 aa10.42□□□□□ -0.74
SNX20-204ENST00000568993 TRAV13-2A0A0B4J235 113 aa10.41□□□□□ -0.74
SNX20-204ENST00000568993 COX6CP09669 75 aa10.41□□□□□ -0.74
SNX20-204ENST00000568993 MUC7Q8TAX7 377 aa10.41□□□□□ -0.74
SNX20-204ENST00000568993 IGKV2-28A0A075B6P5 120 aa10.4□□□□□ -0.74
SNX20-204ENST00000568993 IGKV2D-28P01615 120 aa10.4□□□□□ -0.74
SNX20-204ENST00000568993 GVQW2A0A096LPI5 108 aaPredicted RBP10.4□□□□□ -0.75
SNX20-204ENST00000568993 C6orf223Q8N319 242 aa10.4□□□□□ -0.75
SNX20-204ENST00000568993 NTN5Q8WTR8 489 aaPredicted RBP10.4□□□□□ -0.75
SNX20-204ENST00000568993 STAB2Q8WWQ8 2551 aa10.39□□□□□ -0.75
SNX20-204ENST00000568993 COL7A1Q02388 2944 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms