RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 FBN3Q75N90 2809 aa8.38□□□□□ -1.07
GGA2-213ENST00000568922 KRTAP1-5Q9BYS1 174 aa8.38□□□□□ -1.07
GGA2-213ENST00000568922 NBDYA0A0U1RRE5 68 aa8.38□□□□□ -1.07
GGA2-213ENST00000568922 PTTG1IPP53801 180 aa8.38□□□□□ -1.07
GGA2-213ENST00000568922 ADAMTSL4-AS1Q5T5F5 129 aa8.38□□□□□ -1.07
GGA2-213ENST00000568922 C2orf82Q6UX34 121 aa8.38□□□□□ -1.07
GGA2-213ENST00000568922 A6NDN8 102 aa8.37□□□□□ -1.07
GGA2-213ENST00000568922 ZNF561-AS1K7EIQ3 104 aa8.37□□□□□ -1.07
GGA2-213ENST00000568922 FXYD2P54710 66 aa8.37□□□□□ -1.07
GGA2-213ENST00000568922 COL5A1-AS1Q5SY13 56 aa8.37□□□□□ -1.07
GGA2-213ENST00000568922 C15orf56Q8N910 161 aa8.37□□□□□ -1.07
GGA2-213ENST00000568922 NTN5Q8WTR8 489 aaPredicted RBP8.37□□□□□ -1.07
GGA2-213ENST00000568922 DNAH7Q8WXX0 4024 aa8.37□□□□□ -1.07
GGA2-213ENST00000568922 TMEM238LA0A1B0GVL6 79 aa8.36□□□□□ -1.07
GGA2-213ENST00000568922 A6NJY4 79 aa8.36□□□□□ -1.07
GGA2-213ENST00000568922 C3orf84H3BNL1 204 aa8.36□□□□□ -1.07
GGA2-213ENST00000568922 SMIM13P0DJ93 91 aa8.36□□□□□ -1.07
GGA2-213ENST00000568922 IFITM1P13164 125 aa8.36□□□□□ -1.07
GGA2-213ENST00000568922 ERG28Q9UKR5 140 aa8.36□□□□□ -1.07
GGA2-213ENST00000568922 CSMD3Q7Z407 3707 aa8.36□□□□□ -1.07
GGA2-213ENST00000568922 GVQW2A0A096LPI5 108 aaPredicted RBP8.36□□□□□ -1.07
GGA2-213ENST00000568922 F8WDY8 70 aa8.36□□□□□ -1.07
GGA2-213ENST00000568922 CASC10Q5T4H9 136 aa8.36□□□□□ -1.07
GGA2-213ENST00000568922 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
GGA2-213ENST00000568922 C6orf223Q8N319 242 aa8.36□□□□□ -1.07
GGA2-213ENST00000568922 COPS9Q8WXC6 57 aa8.36□□□□□ -1.07
GGA2-213ENST00000568922 RPL24P83731 157 aaKnown RBP8.35□□□□□ -1.07
GGA2-213ENST00000568922 HIGD2BQ4VC39 106 aa8.35□□□□□ -1.07
GGA2-213ENST00000568922 C2orf48Q96LS8 159 aa8.35□□□□□ -1.07
GGA2-213ENST00000568922 A0A0U1RRA0 63 aa8.34□□□□□ -1.07
GGA2-213ENST00000568922 LINC00158P58513 81 aa8.34□□□□□ -1.07
GGA2-213ENST00000568922 COX17Q14061 63 aa8.34□□□□□ -1.07
GGA2-213ENST00000568922 LINC00526Q96FQ7 95 aa8.34□□□□□ -1.07
GGA2-213ENST00000568922 UNQ6190/PRO20217Q6UXQ8 127 aa8.33□□□□□ -1.08
GGA2-213ENST00000568922 DAND5Q8N907 189 aa8.33□□□□□ -1.08
GGA2-213ENST00000568922 USP17L23D6RBM5 183 aa8.33□□□□□ -1.08
GGA2-213ENST00000568922 PFN2P35080 140 aa8.33□□□□□ -1.08
GGA2-213ENST00000568922 MIR7-3HGQ8N6C7 128 aa8.33□□□□□ -1.08
GGA2-213ENST00000568922 CAMK2N2Q96S95 79 aa8.33□□□□□ -1.08
GGA2-213ENST00000568922 PPDPFQ9H3Y8 114 aa8.33□□□□□ -1.08
GGA2-213ENST00000568922 NHP2Q9NX24 153 aaKnown RBP8.33□□□□□ -1.08
GGA2-213ENST00000568922 PSCAO43653 123 aa8.32□□□□□ -1.08
GGA2-213ENST00000568922 C10orf25Q5T742 122 aa8.32□□□□□ -1.08
GGA2-213ENST00000568922 LINC00308Q8TCZ7 52 aa8.32□□□□□ -1.08
GGA2-213ENST00000568922 STARD9Q9P2P6 4700 aa8.32□□□□□ -1.08
GGA2-213ENST00000568922 TRBV30A0A0K0K1B3 111 aa8.31□□□□□ -1.08
GGA2-213ENST00000568922 A0A1B0GWB2 263 aa8.31□□□□□ -1.08
GGA2-213ENST00000568922 A4D1N5 150 aa8.31□□□□□ -1.08
GGA2-213ENST00000568922 NPC2P61916 151 aa8.31□□□□□ -1.08
GGA2-213ENST00000568922 PLECQ15149 4684 aaKnown RBP8.31□□□□□ -1.08
GGA2-213ENST00000568922 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.31□□□□□ -1.08
GGA2-213ENST00000568922 C6orf48Q9UBA6 75 aa8.3□□□□□ -1.08
GGA2-213ENST00000568922 LY6G6CO95867 125 aa8.29□□□□□ -1.08
GGA2-213ENST00000568922 C9orf116Q5BN46 136 aaPredicted RBP8.29□□□□□ -1.08
GGA2-213ENST00000568922 SOSTDC1Q6X4U4 206 aa8.29□□□□□ -1.08
GGA2-213ENST00000568922 LINC00476Q8WZB0 136 aa8.29□□□□□ -1.08
GGA2-213ENST00000568922 DNAH1Q9P2D7 4330 aa8.29□□□□□ -1.08
GGA2-213ENST00000568922 TAX1BP3O14907 124 aa8.29□□□□□ -1.08
GGA2-213ENST00000568922 SYCNQ0VAF6 134 aa8.29□□□□□ -1.08
GGA2-213ENST00000568922 Q6ZRU5 148 aa8.29□□□□□ -1.08
GGA2-213ENST00000568922 K7ERJ3 54 aa8.28□□□□□ -1.08
GGA2-213ENST00000568922 M0R2N4 97 aa8.28□□□□□ -1.08
GGA2-213ENST00000568922 EIF4EBP3O60516 100 aaPredicted RBP8.28□□□□□ -1.08
GGA2-213ENST00000568922 CFC1BP0CG36 223 aa8.28□□□□□ -1.08
GGA2-213ENST00000568922 CFC1P0CG37 223 aa8.28□□□□□ -1.08
GGA2-213ENST00000568922 Q6ZR54 194 aa8.28□□□□□ -1.08
GGA2-213ENST00000568922 A0A0B4J2C4 111 aa8.27□□□□□ -1.09
GGA2-213ENST00000568922 C14orf177Q52M58 125 aa8.27□□□□□ -1.09
GGA2-213ENST00000568922 LOC107984156A0A0G2JMH3 177 aa8.26□□□□□ -1.09
GGA2-213ENST00000568922 LECT2O14960 151 aa8.26□□□□□ -1.09
GGA2-213ENST00000568922 RNF151Q2KHN1 245 aa8.26□□□□□ -1.09
GGA2-213ENST00000568922 Q6ZRN7 208 aaPredicted RBP8.26□□□□□ -1.09
GGA2-213ENST00000568922 ARL17AQ8IVW1 177 aa8.26□□□□□ -1.09
GGA2-213ENST00000568922 RAB37Q96AX2 223 aa8.26□□□□□ -1.09
GGA2-213ENST00000568922 CARD19Q96LW7 228 aa8.26□□□□□ -1.09
GGA2-213ENST00000568922 LYSTQ99698 3801 aa8.26□□□□□ -1.09
GGA2-213ENST00000568922 SND1-IT1Q9HBX3 110 aa8.25□□□□□ -1.09
GGA2-213ENST00000568922 PRO1854Q9UHT4 67 aa8.25□□□□□ -1.09
GGA2-213ENST00000568922 VPS13DQ5THJ4 4388 aa8.25□□□□□ -1.09
GGA2-213ENST00000568922 WFDC2Q14508 124 aa8.24□□□□□ -1.09
GGA2-213ENST00000568922 C9orf118A6NHY6 69 aa8.24□□□□□ -1.09
GGA2-213ENST00000568922 NDUFC2-KCTD14E9PQ53 114 aa8.24□□□□□ -1.09
GGA2-213ENST00000568922 SLPIP03973 132 aa8.24□□□□□ -1.09
GGA2-213ENST00000568922 TENM2Q9NT68 2774 aa8.23□□□□□ -1.09
GGA2-213ENST00000568922 LRCOL1A6NCL2 159 aa8.23□□□□□ -1.09
GGA2-213ENST00000568922 A0A1B0GV90 55 aa8.22□□□□□ -1.09
GGA2-213ENST00000568922 TLX1NBP0CAT3 122 aa8.22□□□□□ -1.09
GGA2-213ENST00000568922 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
GGA2-213ENST00000568922 NDUFC2O95298 119 aa8.22□□□□□ -1.09
GGA2-213ENST00000568922 CNBPP62633 177 aaKnown RBP8.22□□□□□ -1.09
GGA2-213ENST00000568922 C1orf134Q5TEV5 83 aa8.22□□□□□ -1.09
GGA2-213ENST00000568922 H3BUT2 72 aa8.21□□□□□ -1.1
GGA2-213ENST00000568922 TSPAN13O95857 204 aa8.2□□□□□ -1.1
GGA2-213ENST00000568922 TGP01266 2768 aa8.2□□□□□ -1.1
GGA2-213ENST00000568922 TRAV13-2A0A0B4J235 113 aa8.19□□□□□ -1.1
GGA2-213ENST00000568922 IGKV2-28A0A075B6P5 120 aa8.19□□□□□ -1.1
GGA2-213ENST00000568922 IGKV2D-28P01615 120 aa8.19□□□□□ -1.1
GGA2-213ENST00000568922 Q6ZRP5 223 aa8.19□□□□□ -1.1
GGA2-213ENST00000568922 NAA38Q9BRA0 125 aaKnown RBP8.19□□□□□ -1.1
GGA2-213ENST00000568922 RPL13AP40429 203 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms