RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 NDUFA1O15239 70 aa5.93□□□□□ -1.46
SF3B3-211ENST00000568291 MT-ND6P03923 174 aa5.93□□□□□ -1.46
SF3B3-211ENST00000568291 NDUFA6P56556 154 aa5.93□□□□□ -1.46
SF3B3-211ENST00000568291 COX19Q49B96 90 aa5.93□□□□□ -1.46
SF3B3-211ENST00000568291 ERASQ7Z444 233 aa5.93□□□□□ -1.46
SF3B3-211ENST00000568291 C18orf32Q8TCD1 76 aa5.93□□□□□ -1.46
SF3B3-211ENST00000568291 TIMM17AQ99595 171 aa5.93□□□□□ -1.46
SF3B3-211ENST00000568291 SMCO4Q9NRQ5 59 aa5.93□□□□□ -1.46
SF3B3-211ENST00000568291 A0A096LNJ9 63 aa5.92□□□□□ -1.46
SF3B3-211ENST00000568291 LINC01546A6NGU7 62 aa5.92□□□□□ -1.46
SF3B3-211ENST00000568291 Q6ZRP5 223 aa5.92□□□□□ -1.46
SF3B3-211ENST00000568291 PHF5AQ7RTV0 110 aaKnown RBP5.92□□□□□ -1.46
SF3B3-211ENST00000568291 C7orf33Q8WU49 177 aa5.92□□□□□ -1.46
SF3B3-211ENST00000568291 YPEL4Q96NS1 127 aa5.92□□□□□ -1.46
SF3B3-211ENST00000568291 CST9LQ9H4G1 147 aa5.92□□□□□ -1.46
SF3B3-211ENST00000568291 GEMIN7Q9H840 131 aaKnown RBP5.92□□□□□ -1.46
SF3B3-211ENST00000568291 MRPL35Q9NZE8 188 aaKnown RBP5.92□□□□□ -1.46
SF3B3-211ENST00000568291 LINC00614P0C842 121 aa5.91□□□□□ -1.46
SF3B3-211ENST00000568291 C6orf226Q5I0X4 101 aa5.91□□□□□ -1.46
SF3B3-211ENST00000568291 LINC00469Q8N7U9 141 aa5.91□□□□□ -1.46
SF3B3-211ENST00000568291 LINC00474Q9P2X8 69 aa5.91□□□□□ -1.46
SF3B3-211ENST00000568291 PRSS2P07478 247 aa5.9□□□□□ -1.46
SF3B3-211ENST00000568291 SPINK8P0C7L1 97 aa5.9□□□□□ -1.46
SF3B3-211ENST00000568291 G0S2P27469 103 aa5.9□□□□□ -1.46
SF3B3-211ENST00000568291 HERVK_113P63121 156 aa5.9□□□□□ -1.46
SF3B3-211ENST00000568291 PRR3P79522 188 aaKnown RBP5.9□□□□□ -1.46
SF3B3-211ENST00000568291 RNF151Q2KHN1 245 aa5.9□□□□□ -1.46
SF3B3-211ENST00000568291 FAM19A5Q7Z5A7 132 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-211ENST00000568291 KRTAP11-1Q8IUC1 163 aa5.9□□□□□ -1.46
SF3B3-211ENST00000568291 NPSP0C0P6 89 aa5.89□□□□□ -1.47
SF3B3-211ENST00000568291 CKS1BP61024 79 aa5.89□□□□□ -1.47
SF3B3-211ENST00000568291 PMVKQ15126 192 aa5.89□□□□□ -1.47
SF3B3-211ENST00000568291 PAPPA-AS1Q5QFB9 102 aa5.89□□□□□ -1.47
SF3B3-211ENST00000568291 FAM19A3Q7Z5A8 133 aa5.89□□□□□ -1.47
SF3B3-211ENST00000568291 KRTAP7-1Q8IUC3 87 aa5.89□□□□□ -1.47
SF3B3-211ENST00000568291 PACRGQ96M98 296 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-211ENST00000568291 TINCRA0A1B0GVN0 87 aa5.88□□□□□ -1.47
SF3B3-211ENST00000568291 SMIM1B2RUZ4 78 aa5.88□□□□□ -1.47
SF3B3-211ENST00000568291 ODF1Q14990 250 aa5.88□□□□□ -1.47
SF3B3-211ENST00000568291 C9orf129Q5T035 196 aaKnown RBP5.88□□□□□ -1.47
SF3B3-211ENST00000568291 F8WDY8 70 aa5.87□□□□□ -1.47
SF3B3-211ENST00000568291 RAB5BP61020 215 aa5.87□□□□□ -1.47
SF3B3-211ENST00000568291 LINC01561Q8N1V8 128 aa5.87□□□□□ -1.47
SF3B3-211ENST00000568291 XAGE1AQ9HD64 81 aa5.87□□□□□ -1.47
SF3B3-211ENST00000568291 PSORS1C2Q9UIG4 136 aa5.87□□□□□ -1.47
SF3B3-211ENST00000568291 PKIGQ9Y2B9 76 aa5.87□□□□□ -1.47
SF3B3-211ENST00000568291 TRBV30A0A0K0K1B3 111 aa5.86□□□□□ -1.47
SF3B3-211ENST00000568291 NDUFC2-KCTD14E9PQ53 114 aa5.86□□□□□ -1.47
SF3B3-211ENST00000568291 HBDP02042 147 aa5.86□□□□□ -1.47
SF3B3-211ENST00000568291 TRGC2P03986 189 aa5.86□□□□□ -1.47
SF3B3-211ENST00000568291 TLX1NBP0CAT3 122 aa5.86□□□□□ -1.47
SF3B3-211ENST00000568291 SEC11AP67812 179 aa5.86□□□□□ -1.47
SF3B3-211ENST00000568291 PDZD11Q5EBL8 140 aa5.86□□□□□ -1.47
SF3B3-211ENST00000568291 BAGE3Q86Y29 109 aa5.86□□□□□ -1.47
SF3B3-211ENST00000568291 Q8IZM0 81 aa5.86□□□□□ -1.47
SF3B3-211ENST00000568291 FAM19A2Q8N3H0 131 aa5.86□□□□□ -1.47
SF3B3-211ENST00000568291 COX7B2Q8TF08 81 aa5.86□□□□□ -1.47
SF3B3-211ENST00000568291 SCO1O75880 301 aa5.85□□□□□ -1.47
SF3B3-211ENST00000568291 C1orf137Q5JT78 98 aa5.85□□□□□ -1.47
SF3B3-211ENST00000568291 KRTAP4-12Q9BQ66 201 aa5.85□□□□□ -1.47
SF3B3-211ENST00000568291 TNXBP22105 4242 aa5.84□□□□□ -1.47
SF3B3-211ENST00000568291 IGLV5-45A0A087WSX0 123 aa5.84□□□□□ -1.47
SF3B3-211ENST00000568291 F8VRH5 84 aa5.84□□□□□ -1.47
SF3B3-211ENST00000568291 IGLC3P0DOY3 106 aa5.84□□□□□ -1.47
SF3B3-211ENST00000568291 ZNF22P17026 224 aaPredicted RBP5.84□□□□□ -1.47
SF3B3-211ENST00000568291 SRSF9Q13242 221 aaKnown RBP eCLIP5.84□□□□□ -1.47
SF3B3-211ENST00000568291 LINC01549A6NIU2 74 aa5.83□□□□□ -1.48
SF3B3-211ENST00000568291 C11orf86A6NJI1 115 aa5.83□□□□□ -1.48
SF3B3-211ENST00000568291 M0QXV9 152 aa5.83□□□□□ -1.48
SF3B3-211ENST00000568291 NUPR1O60356 82 aa5.83□□□□□ -1.48
SF3B3-211ENST00000568291 ZNF625Q96I27 306 aaPredicted RBP5.83□□□□□ -1.48
SF3B3-211ENST00000568291 COLCA2A8K830 154 aa5.82□□□□□ -1.48
SF3B3-211ENST00000568291 H0Y8G0 127 aa5.82□□□□□ -1.48
SF3B3-211ENST00000568291 ATP5LO75964 103 aa5.82□□□□□ -1.48
SF3B3-211ENST00000568291 LINC00310P59036 64 aa5.82□□□□□ -1.48
SF3B3-211ENST00000568291 TMEM170BQ5T4T1 132 aa5.82□□□□□ -1.48
SF3B3-211ENST00000568291 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
SF3B3-211ENST00000568291 CHTOPQ9Y3Y2 248 aaKnown RBP5.82□□□□□ -1.48
SF3B3-211ENST00000568291 H3BRM9 83 aa5.81□□□□□ -1.48
SF3B3-211ENST00000568291 SERF1AO75920 110 aa5.81□□□□□ -1.48
SF3B3-211ENST00000568291 PFN2P35080 140 aa5.81□□□□□ -1.48
SF3B3-211ENST00000568291 UBE2BP63146 152 aa5.81□□□□□ -1.48
SF3B3-211ENST00000568291 SPINK6Q6UWN8 80 aa5.81□□□□□ -1.48
SF3B3-211ENST00000568291 IFI27L1Q96BM0 104 aa5.81□□□□□ -1.48
SF3B3-211ENST00000568291 CHCHD1Q96BP2 118 aaKnown RBP5.81□□□□□ -1.48
SF3B3-211ENST00000568291 LINC01600Q96MT4 127 aa5.81□□□□□ -1.48
SF3B3-211ENST00000568291 C22orf24Q9Y442 160 aa5.81□□□□□ -1.48
SF3B3-211ENST00000568291 IGLV5-39A0A0G2JS06 123 aa5.8□□□□□ -1.48
SF3B3-211ENST00000568291 GAGE10A6NGK3 116 aa5.8□□□□□ -1.48
SF3B3-211ENST00000568291 HSBP1O75506 76 aa5.8□□□□□ -1.48
SF3B3-211ENST00000568291 LRP2P98164 4655 aa5.79□□□□□ -1.48
SF3B3-211ENST00000568291 A0A0U1RRA0 63 aa5.79□□□□□ -1.48
SF3B3-211ENST00000568291 RPL37AP8A6NKH3 93 aa5.79□□□□□ -1.48
SF3B3-211ENST00000568291 IGLV7-43P04211 117 aa5.79□□□□□ -1.48
SF3B3-211ENST00000568291 FABP4P15090 132 aa5.79□□□□□ -1.48
SF3B3-211ENST00000568291 CXCL5P42830 114 aa5.79□□□□□ -1.48
SF3B3-211ENST00000568291 REG3GQ6UW15 175 aa5.78□□□□□ -1.48
SF3B3-211ENST00000568291 PMCHL2Q9BQD1 86 aa5.78□□□□□ -1.48
SF3B3-211ENST00000568291 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
SF3B3-211ENST00000568291 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms