RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	RBMY1A1	P0DJD3	496 aa	Known RBP	3.45	□□□□□ -1.86
CBFB-208	ENST00000567947	RBMY1C	P0DJD4	496 aa		3.45	□□□□□ -1.86
CBFB-208	ENST00000567947	GATA1	P15976	413 aa	Predicted RBP	3.45	□□□□□ -1.86
CBFB-208	ENST00000567947	RBMY1F	Q15415	496 aa	Known RBP	3.45	□□□□□ -1.86
CBFB-208	ENST00000567947	MINOS1	Q5TGZ0	78 aa		3.45	□□□□□ -1.86
CBFB-208	ENST00000567947		Q8N2B8	174 aa		3.45	□□□□□ -1.86
CBFB-208	ENST00000567947	SMCR5	Q8TEV8	140 aa		3.45	□□□□□ -1.86
CBFB-208	ENST00000567947	LINC00477	Q96M19	166 aa		3.45	□□□□□ -1.86
CBFB-208	ENST00000567947	GAFA1	Q96PS6	74 aa		3.45	□□□□□ -1.86
CBFB-208	ENST00000567947	ZNRD1	Q9P1U0	126 aa		3.45	□□□□□ -1.86
CBFB-208	ENST00000567947	UBE2D4	Q9Y2X8	147 aa		3.45	□□□□□ -1.86
CBFB-208	ENST00000567947	MINOS1-NBL1	R4GNA1	71 aa		3.45	□□□□□ -1.86
CBFB-208	ENST00000567947	IGHV3OR16-10	A0A075B7F0	116 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	TRAV21	A0A0B4J279	112 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	IGHV1-58	A0A0C4DH39	117 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	ODF3B	A8MYP8	253 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947		K7EIM0	57 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	NDUFB3	O43676	98 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	DNAL4	O96015	105 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	BAALC-AS2	P0C853	105 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	RPL35A	P18077	110 aa	Known RBP	3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	RNASE4	P34096	147 aa	Known RBP	3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	TSPEAR-AS2	P59090	65 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947		Q6ZRU5	148 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	DAZ4	Q86SG3	579 aa	Known RBP	3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	DYNAP	Q8N1N2	210 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	DSCR8	Q96T75	97 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	TMEM243	Q9BU79	118 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	ESM1	Q9NQ30	184 aa		3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	DAZ1	Q9NQZ3	744 aa	Known RBP	3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	DAZ3	Q9NR90	486 aa	Known RBP	3.44	□□□□□ -1.86
CBFB-208	ENST00000567947	PRKDC	P78527	4128 aa	Known RBP	3.43	□□□□□ -1.86
CBFB-208	ENST00000567947	IGLV7-46	A0A075B6I9	117 aa		3.43	□□□□□ -1.86
CBFB-208	ENST00000567947	TRAV8-3	A0A0A6YYJ7	113 aa		3.43	□□□□□ -1.86
CBFB-208	ENST00000567947	IGHV1-3	A0A0C4DH29	117 aa		3.43	□□□□□ -1.86
CBFB-208	ENST00000567947	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.43	□□□□□ -1.86
CBFB-208	ENST00000567947		H3BQ85	93 aa		3.43	□□□□□ -1.86
CBFB-208	ENST00000567947	CD164	Q04900	197 aa		3.43	□□□□□ -1.86
CBFB-208	ENST00000567947	LYPD2	Q6UXB3	125 aa		3.43	□□□□□ -1.86
CBFB-208	ENST00000567947	GPHB5	Q86YW7	130 aa		3.43	□□□□□ -1.86
CBFB-208	ENST00000567947	PRR15	Q8IV56	129 aa		3.43	□□□□□ -1.86
CBFB-208	ENST00000567947	C3orf56	Q8N813	242 aa		3.43	□□□□□ -1.86
CBFB-208	ENST00000567947	ZNRF1	Q8ND25	227 aa		3.43	□□□□□ -1.86
CBFB-208	ENST00000567947	PLXNB1	O43157	2135 aa		3.43	□□□□□ -1.86
CBFB-208	ENST00000567947	IGLV11-55	A0A075B6I3	123 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	TRAV13-2	A0A0B4J235	113 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	TRAV41	A0A0B4J266	112 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	CLPSL1	A2RUU4	121 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947		H3BTX0	84 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947		H7BZZ5	65 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	NDUFA1	O15239	70 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	IGKV2D-40	P01614	121 aa	Predicted RBP	3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	IGLV1-47	P01700	117 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	TRGV3	P03979	118 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	IGHV3-30-3	P0DP02	117 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	RPL28	P46779	137 aa	Known RBP	3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	XCL1	P47992	114 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	HCP5	Q6MZN7	132 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	LINC01561	Q8N1V8	128 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	C14orf178	Q8N769	122 aa	Predicted RBP	3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	XCL2	Q9UBD3	114 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	PHLDA3	Q9Y5J5	127 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	KIF25-AS1	Q9Y6Z4	181 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	TG	P01266	2768 aa		3.42	□□□□□ -1.86
CBFB-208	ENST00000567947	PLAC8L1	A1L4L8	177 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947	LYRM9	A8MSI8	78 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947	IBA57-AS1	B1ANH7	110 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947		H7C2G1	150 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947	SOCS3	O14543	225 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947	IGHV1-8	P0DP01	117 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947	PMAIP1	Q13794	54 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947	DEFB112	Q30KQ8	113 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947	C10orf55	Q5SWW7	151 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947	KPRP	Q5T749	579 aa	Predicted RBP	3.41	□□□□□ -1.86
CBFB-208	ENST00000567947	FAM19A3	Q7Z5A8	133 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947	C20orf203	Q8NBC4	194 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947	NPB	Q8NG41	125 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947	NDUFA12	Q9UI09	145 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947	COL7A1	Q02388	2944 aa		3.41	□□□□□ -1.86
CBFB-208	ENST00000567947		A0A0U1RQV1	116 aa		3.4	□□□□□ -1.87
CBFB-208	ENST00000567947	PDE6G	P18545	87 aa		3.4	□□□□□ -1.87
CBFB-208	ENST00000567947	S100A4	P26447	101 aa	Known RBP	3.4	□□□□□ -1.87
CBFB-208	ENST00000567947	SAA4	P35542	130 aa		3.4	□□□□□ -1.87
CBFB-208	ENST00000567947	LINC00315	P59091	139 aa		3.4	□□□□□ -1.87
CBFB-208	ENST00000567947	VMO1	Q7Z5L0	202 aa		3.4	□□□□□ -1.87
CBFB-208	ENST00000567947	DYNLRB2	Q8TF09	96 aa		3.4	□□□□□ -1.87
CBFB-208	ENST00000567947	CLEC2B	Q92478	149 aa		3.4	□□□□□ -1.87
CBFB-208	ENST00000567947	LEAP2	Q969E1	77 aa		3.4	□□□□□ -1.87
CBFB-208	ENST00000567947		A6NDX4	124 aa		3.39	□□□□□ -1.87
CBFB-208	ENST00000567947	IGHV3-48	P01763	117 aa		3.39	□□□□□ -1.87
CBFB-208	ENST00000567947	CCK	P06307	115 aa		3.39	□□□□□ -1.87
CBFB-208	ENST00000567947	BLCAP	P62952	87 aa		3.39	□□□□□ -1.87
CBFB-208	ENST00000567947	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		3.39	□□□□□ -1.87
CBFB-208	ENST00000567947	FP248	Q71RG6	208 aa	Predicted RBP	3.39	□□□□□ -1.87
CBFB-208	ENST00000567947	FAM19A1	Q7Z5A9	133 aa		3.39	□□□□□ -1.87
CBFB-208	ENST00000567947	LINC01006	Q8NI28	216 aa		3.39	□□□□□ -1.87
CBFB-208	ENST00000567947		Q8TAT8	98 aa		3.39	□□□□□ -1.87
CBFB-208	ENST00000567947	LINC00308	Q8TCZ7	52 aa		3.39	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms