RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 TOMM6Q96B49 74 aa7.41□□□□□ -1.22
GTF3C1-208ENST00000567843 Q8IZM0 81 aa7.4□□□□□ -1.22
GTF3C1-208ENST00000567843 TIMM17AQ99595 171 aa7.4□□□□□ -1.22
GTF3C1-208ENST00000567843 LPAP08519 4548 aa7.39□□□□□ -1.23
GTF3C1-208ENST00000567843 H0Y9J4 135 aa7.39□□□□□ -1.23
GTF3C1-208ENST00000567843 NPSP0C0P6 89 aa7.39□□□□□ -1.23
GTF3C1-208ENST00000567843 PAPPA-AS1Q5QFB9 102 aa7.39□□□□□ -1.23
GTF3C1-208ENST00000567843 UQCC3Q6UW78 93 aa7.39□□□□□ -1.23
GTF3C1-208ENST00000567843 ERASQ7Z444 233 aa7.39□□□□□ -1.23
GTF3C1-208ENST00000567843 FAM19A3Q7Z5A8 133 aa7.39□□□□□ -1.23
GTF3C1-208ENST00000567843 S100PP25815 95 aa7.38□□□□□ -1.23
GTF3C1-208ENST00000567843 G0S2P27469 103 aa7.38□□□□□ -1.23
GTF3C1-208ENST00000567843 COMMD7Q86VX2 200 aa7.38□□□□□ -1.23
GTF3C1-208ENST00000567843 C22orf24Q9Y442 160 aa7.38□□□□□ -1.23
GTF3C1-208ENST00000567843 TRAV9-1A0A075B6T8 112 aa7.37□□□□□ -1.23
GTF3C1-208ENST00000567843 SPINK8P0C7L1 97 aa7.37□□□□□ -1.23
GTF3C1-208ENST00000567843 SEC11AP67812 179 aa7.37□□□□□ -1.23
GTF3C1-208ENST00000567843 FABP9Q0Z7S8 132 aa7.37□□□□□ -1.23
GTF3C1-208ENST00000567843 SEC11CQ9BY50 192 aa7.37□□□□□ -1.23
GTF3C1-208ENST00000567843 SMIM1B2RUZ4 78 aa7.36□□□□□ -1.23
GTF3C1-208ENST00000567843 F8VRH5 84 aa7.36□□□□□ -1.23
GTF3C1-208ENST00000567843 RAB5BP61020 215 aa7.36□□□□□ -1.23
GTF3C1-208ENST00000567843 FA2HQ7L5A8 372 aa7.36□□□□□ -1.23
GTF3C1-208ENST00000567843 GNB1LQ9BYB4 327 aa7.36□□□□□ -1.23
GTF3C1-208ENST00000567843 MRPL18Q9H0U6 180 aaKnown RBP7.36□□□□□ -1.23
GTF3C1-208ENST00000567843 TINCRA0A1B0GVN0 87 aa7.35□□□□□ -1.23
GTF3C1-208ENST00000567843 KRTAP1-4P0C5Y4 121 aa7.35□□□□□ -1.23
GTF3C1-208ENST00000567843 COX7B2Q8TF08 81 aa7.35□□□□□ -1.23
GTF3C1-208ENST00000567843 CST9LQ9H4G1 147 aa7.35□□□□□ -1.23
GTF3C1-208ENST00000567843 RPS10P5Q9NQ39 176 aa7.35□□□□□ -1.23
GTF3C1-208ENST00000567843 GAGE10A6NGK3 116 aa7.34□□□□□ -1.23
GTF3C1-208ENST00000567843 SMCO4Q9NRQ5 59 aa7.34□□□□□ -1.23
GTF3C1-208ENST00000567843 NDUFA6P56556 154 aa7.33□□□□□ -1.24
GTF3C1-208ENST00000567843 LBHQ53QV2 105 aaPredicted RBP7.33□□□□□ -1.24
GTF3C1-208ENST00000567843 PDZD11Q5EBL8 140 aa7.33□□□□□ -1.24
GTF3C1-208ENST00000567843 IGLV5-45A0A087WSX0 123 aa7.32□□□□□ -1.24
GTF3C1-208ENST00000567843 LINC01546A6NGU7 62 aa7.32□□□□□ -1.24
GTF3C1-208ENST00000567843 RPL37AP8A6NKH3 93 aa7.32□□□□□ -1.24
GTF3C1-208ENST00000567843 ZNF861PO60384 105 aa7.32□□□□□ -1.24
GTF3C1-208ENST00000567843 CXCL5P42830 114 aa7.32□□□□□ -1.24
GTF3C1-208ENST00000567843 PMVKQ15126 192 aa7.32□□□□□ -1.24
GTF3C1-208ENST00000567843 MRPL55Q7Z7F7 128 aaKnown RBP7.32□□□□□ -1.24
GTF3C1-208ENST00000567843 IGLV1-50A0A075B6I6 118 aa7.31□□□□□ -1.24
GTF3C1-208ENST00000567843 PMCHL1Q16048 86 aa7.31□□□□□ -1.24
GTF3C1-208ENST00000567843 LINC00167Q96N53 147 aa7.31□□□□□ -1.24
GTF3C1-208ENST00000567843 A0A096LNJ9 63 aa7.3□□□□□ -1.24
GTF3C1-208ENST00000567843 SCO1O75880 301 aa7.3□□□□□ -1.24
GTF3C1-208ENST00000567843 COX19Q49B96 90 aa7.3□□□□□ -1.24
GTF3C1-208ENST00000567843 C10orf91Q5T1B1 145 aa7.3□□□□□ -1.24
GTF3C1-208ENST00000567843 URB1-AS1Q96HZ7 61 aa7.3□□□□□ -1.24
GTF3C1-208ENST00000567843 TRAPPC1Q9Y5R8 145 aa7.3□□□□□ -1.24
GTF3C1-208ENST00000567843 NUPR1O60356 82 aa7.29□□□□□ -1.24
GTF3C1-208ENST00000567843 PFN2P35080 140 aa7.29□□□□□ -1.24
GTF3C1-208ENST00000567843 RHEBQ15382 184 aa7.29□□□□□ -1.24
GTF3C1-208ENST00000567843 CARHSP1Q9Y2V2 147 aaKnown RBP7.29□□□□□ -1.24
GTF3C1-208ENST00000567843 LINC01549A6NIU2 74 aa7.28□□□□□ -1.24
GTF3C1-208ENST00000567843 H3BRM9 83 aa7.28□□□□□ -1.24
GTF3C1-208ENST00000567843 C18orf32Q8TCD1 76 aa7.28□□□□□ -1.24
GTF3C1-208ENST00000567843 TP73-AS1Q9UF72 201 aa7.28□□□□□ -1.24
GTF3C1-208ENST00000567843 BCE1O60756 84 aa7.27□□□□□ -1.25
GTF3C1-208ENST00000567843 ATP5LO75964 103 aa7.27□□□□□ -1.25
GTF3C1-208ENST00000567843 TSPAN13O95857 204 aa7.27□□□□□ -1.25
GTF3C1-208ENST00000567843 APOC3P02656 99 aa7.27□□□□□ -1.25
GTF3C1-208ENST00000567843 IGLC3P0DOY3 106 aa7.27□□□□□ -1.25
GTF3C1-208ENST00000567843 ZNF22P17026 224 aaPredicted RBP7.27□□□□□ -1.25
GTF3C1-208ENST00000567843 ZNF625Q96I27 306 aaPredicted RBP7.27□□□□□ -1.25
GTF3C1-208ENST00000567843 ANAPC11Q9NYG5 84 aa7.27□□□□□ -1.25
GTF3C1-208ENST00000567843 LINC00614P0C842 121 aa7.26□□□□□ -1.25
GTF3C1-208ENST00000567843 RPL28P46779 137 aaKnown RBP7.26□□□□□ -1.25
GTF3C1-208ENST00000567843 PRR4Q16378 134 aa7.26□□□□□ -1.25
GTF3C1-208ENST00000567843 NKAPP1Q8N9T2 125 aa7.26□□□□□ -1.25
GTF3C1-208ENST00000567843 IGKV2-28A0A075B6P5 120 aa7.25□□□□□ -1.25
GTF3C1-208ENST00000567843 A0A087X002 238 aa7.25□□□□□ -1.25
GTF3C1-208ENST00000567843 IGLV5-39A0A0G2JS06 123 aa7.25□□□□□ -1.25
GTF3C1-208ENST00000567843 IGKV2D-28P01615 120 aa7.25□□□□□ -1.25
GTF3C1-208ENST00000567843 HBDP02042 147 aa7.25□□□□□ -1.25
GTF3C1-208ENST00000567843 RPL13AP40429 203 aaKnown RBP7.25□□□□□ -1.25
GTF3C1-208ENST00000567843 BAGE3Q86Y29 109 aa7.25□□□□□ -1.25
GTF3C1-208ENST00000567843 C11orf86A6NJI1 115 aa7.24□□□□□ -1.25
GTF3C1-208ENST00000567843 IGLV5-37A0A075B6J1 123 aa7.23□□□□□ -1.25
GTF3C1-208ENST00000567843 UBE2AP49459 152 aa7.23□□□□□ -1.25
GTF3C1-208ENST00000567843 TMEM170BQ5T4T1 132 aa7.23□□□□□ -1.25
GTF3C1-208ENST00000567843 SND1-IT1Q9HBX3 110 aa7.23□□□□□ -1.25
GTF3C1-208ENST00000567843 ERG28Q9UKR5 140 aa7.23□□□□□ -1.25
GTF3C1-208ENST00000567843 A0A0U1RRA0 63 aa7.22□□□□□ -1.25
GTF3C1-208ENST00000567843 PRLHP81277 87 aa7.22□□□□□ -1.25
GTF3C1-208ENST00000567843 TMEM238C9JI98 176 aa7.21□□□□□ -1.26
GTF3C1-208ENST00000567843 CRYGAP11844 174 aa7.21□□□□□ -1.26
GTF3C1-208ENST00000567843 VPREB1P12018 145 aa7.21□□□□□ -1.26
GTF3C1-208ENST00000567843 Q8NDZ9 215 aa7.21□□□□□ -1.26
GTF3C1-208ENST00000567843 TYMSOSQ8TAI1 123 aa7.21□□□□□ -1.26
GTF3C1-208ENST00000567843 CHTOPQ9Y3Y2 248 aaKnown RBP7.2□□□□□ -1.26
GTF3C1-208ENST00000567843 SNAPINO95295 136 aa7.19□□□□□ -1.26
GTF3C1-208ENST00000567843 NDUFA5Q16718 116 aa7.19□□□□□ -1.26
GTF3C1-208ENST00000567843 FAM19A1Q7Z5A9 133 aa7.19□□□□□ -1.26
GTF3C1-208ENST00000567843 KRTAP13-1Q8IUC0 172 aa7.19□□□□□ -1.26
GTF3C1-208ENST00000567843 SVBPQ8N300 66 aa7.19□□□□□ -1.26
GTF3C1-208ENST00000567843 LINC00158P58513 81 aa7.18□□□□□ -1.26
GTF3C1-208ENST00000567843 KRTAP13-2Q52LG2 175 aa7.18□□□□□ -1.26
GTF3C1-208ENST00000567843 TMEM126AQ9H061 195 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms