RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 VCX2Q9H322 139 aa13.43□□□□□ -0.26
CNEP1R1-209ENST00000567712 LBHQ53QV2 105 aaPredicted RBP13.42□□□□□ -0.26
CNEP1R1-209ENST00000567712 MRPL55Q7Z7F7 128 aaKnown RBP13.42□□□□□ -0.26
CNEP1R1-209ENST00000567712 MAP1LC3AQ9H492 121 aa13.42□□□□□ -0.26
CNEP1R1-209ENST00000567712 CDKN2A-AS1Q9UH64 79 aa13.42□□□□□ -0.26
CNEP1R1-209ENST00000567712 BCE1O60756 84 aa13.41□□□□□ -0.26
CNEP1R1-209ENST00000567712 A0A0U1RQV1 116 aa13.4□□□□□ -0.26
CNEP1R1-209ENST00000567712 TYMSOSQ8TAI1 123 aa13.4□□□□□ -0.26
CNEP1R1-209ENST00000567712 TP73-AS1Q9UF72 201 aa13.4□□□□□ -0.26
CNEP1R1-209ENST00000567712 RPL37AP8A6NKH3 93 aa13.39□□□□□ -0.27
CNEP1R1-209ENST00000567712 KRTAP13-2Q52LG2 175 aa13.39□□□□□ -0.27
CNEP1R1-209ENST00000567712 LINC00167Q96N53 147 aa13.39□□□□□ -0.27
CNEP1R1-209ENST00000567712 LAMTOR2Q9Y2Q5 125 aa13.39□□□□□ -0.27
CNEP1R1-209ENST00000567712 MUC17Q685J3 4493 aa13.39□□□□□ -0.27
CNEP1R1-209ENST00000567712 CRYGAP11844 174 aa13.38□□□□□ -0.27
CNEP1R1-209ENST00000567712 RPL28P46779 137 aaKnown RBP13.38□□□□□ -0.27
CNEP1R1-209ENST00000567712 F8VRH5 84 aa13.37□□□□□ -0.27
CNEP1R1-209ENST00000567712 RETNLBQ9BQ08 111 aa13.37□□□□□ -0.27
CNEP1R1-209ENST00000567712 HERVK_113P63121 156 aa13.35□□□□□ -0.27
CNEP1R1-209ENST00000567712 KRTAP13-1Q8IUC0 172 aa13.35□□□□□ -0.27
CNEP1R1-209ENST00000567712 GAGE10A6NGK3 116 aa13.34□□□□□ -0.27
CNEP1R1-209ENST00000567712 NPSP0C0P6 89 aa13.34□□□□□ -0.27
CNEP1R1-209ENST00000567712 ORMDL2Q53FV1 153 aa13.34□□□□□ -0.27
CNEP1R1-209ENST00000567712 SMIM1B2RUZ4 78 aa13.31□□□□□ -0.28
CNEP1R1-209ENST00000567712 GEMIN7Q9H840 131 aaKnown RBP13.31□□□□□ -0.28
CNEP1R1-209ENST00000567712 SCO1O75880 301 aa13.3□□□□□ -0.28
CNEP1R1-209ENST00000567712 TIMM17AQ99595 171 aa13.29□□□□□ -0.28
CNEP1R1-209ENST00000567712 CXCL5P42830 114 aa13.28□□□□□ -0.28
CNEP1R1-209ENST00000567712 SEC11AP67812 179 aa13.28□□□□□ -0.28
CNEP1R1-209ENST00000567712 TOMM6Q96B49 74 aa13.28□□□□□ -0.28
CNEP1R1-209ENST00000567712 IGLV5-37A0A075B6J1 123 aa13.27□□□□□ -0.29
CNEP1R1-209ENST00000567712 K7EMI3 77 aa13.27□□□□□ -0.29
CNEP1R1-209ENST00000567712 ADCYAP1P18509 176 aa13.27□□□□□ -0.29
CNEP1R1-209ENST00000567712 RAB5BP61020 215 aa13.27□□□□□ -0.29
CNEP1R1-209ENST00000567712 COX7B2Q8TF08 81 aa13.27□□□□□ -0.29
CNEP1R1-209ENST00000567712 NXT2Q9NPJ8 142 aaKnown RBP13.27□□□□□ -0.29
CNEP1R1-209ENST00000567712 PNRC1Q12796 327 aaPredicted RBP13.26□□□□□ -0.29
CNEP1R1-209ENST00000567712 LINC00304Q8N9R0 145 aa13.25□□□□□ -0.29
CNEP1R1-209ENST00000567712 UBE2AP49459 152 aa13.24□□□□□ -0.29
CNEP1R1-209ENST00000567712 KIAA1644Q3SXP7 199 aa13.24□□□□□ -0.29
CNEP1R1-209ENST00000567712 PDZD11Q5EBL8 140 aa13.24□□□□□ -0.29
CNEP1R1-209ENST00000567712 PAPPA-AS1Q5QFB9 102 aa13.24□□□□□ -0.29
CNEP1R1-209ENST00000567712 ANAPC16Q96DE5 110 aa13.24□□□□□ -0.29
CNEP1R1-209ENST00000567712 IGLV5-45A0A087WSX0 123 aa13.23□□□□□ -0.29
CNEP1R1-209ENST00000567712 SPINK8P0C7L1 97 aa13.23□□□□□ -0.29
CNEP1R1-209ENST00000567712 IGKV2-28A0A075B6P5 120 aa13.22□□□□□ -0.29
CNEP1R1-209ENST00000567712 TINCRA0A1B0GVN0 87 aa13.22□□□□□ -0.29
CNEP1R1-209ENST00000567712 IGKV2D-28P01615 120 aa13.22□□□□□ -0.29
CNEP1R1-209ENST00000567712 FAM229BQ4G0N7 80 aa13.22□□□□□ -0.29
CNEP1R1-209ENST00000567712 ERASQ7Z444 233 aa13.22□□□□□ -0.29
CNEP1R1-209ENST00000567712 KRTAP9-6A0A140TA67 174 aa13.21□□□□□ -0.29
CNEP1R1-209ENST00000567712 SCGB3A1Q96QR1 104 aa13.21□□□□□ -0.29
CNEP1R1-209ENST00000567712 MT-ND4LP03901 98 aa13.2□□□□□ -0.3
CNEP1R1-209ENST00000567712 PRLHP81277 87 aa13.2□□□□□ -0.3
CNEP1R1-209ENST00000567712 TPRXLQ17RH7 258 aa13.2□□□□□ -0.3
CNEP1R1-209ENST00000567712 NKAPP1Q8N9T2 125 aa13.19□□□□□ -0.3
CNEP1R1-209ENST00000567712 CDIP1Q9H305 208 aa13.19□□□□□ -0.3
CNEP1R1-209ENST00000567712 IGLV7-46A0A075B6I9 117 aa13.18□□□□□ -0.3
CNEP1R1-209ENST00000567712 IFITM2Q01629 132 aa13.18□□□□□ -0.3
CNEP1R1-209ENST00000567712 CST9LQ9H4G1 147 aa13.18□□□□□ -0.3
CNEP1R1-209ENST00000567712 TMEM238C9JI98 176 aa13.16□□□□□ -0.3
CNEP1R1-209ENST00000567712 G0S2P27469 103 aa13.16□□□□□ -0.3
CNEP1R1-209ENST00000567712 CLLU1Q5K131 121 aa13.16□□□□□ -0.3
CNEP1R1-209ENST00000567712 C3orf22Q8N5N4 141 aa13.16□□□□□ -0.3
CNEP1R1-209ENST00000567712 IGKV2D-26A0A0A0MRZ7 120 aa13.15□□□□□ -0.3
CNEP1R1-209ENST00000567712 Q8NDZ9 215 aa13.15□□□□□ -0.3
CNEP1R1-209ENST00000567712 VPREB1P12018 145 aa13.14□□□□□ -0.31
CNEP1R1-209ENST00000567712 LINC01546A6NGU7 62 aa13.13□□□□□ -0.31
CNEP1R1-209ENST00000567712 PFN2P35080 140 aa13.13□□□□□ -0.31
CNEP1R1-209ENST00000567712 TMEM126AQ9H061 195 aa13.13□□□□□ -0.31
CNEP1R1-209ENST00000567712 FAM19A1Q7Z5A9 133 aa13.12□□□□□ -0.31
CNEP1R1-209ENST00000567712 M0R378 163 aa13.11□□□□□ -0.31
CNEP1R1-209ENST00000567712 PLEKHB2Q96CS7 222 aa13.11□□□□□ -0.31
CNEP1R1-209ENST00000567712 RAB14P61106 215 aa13.1□□□□□ -0.31
CNEP1R1-209ENST00000567712 PMVKQ15126 192 aa13.1□□□□□ -0.31
CNEP1R1-209ENST00000567712 PPDPFQ9H3Y8 114 aa13.1□□□□□ -0.31
CNEP1R1-209ENST00000567712 SND1-IT1Q9HBX3 110 aa13.1□□□□□ -0.31
CNEP1R1-209ENST00000567712 ATP5LO75964 103 aa13.09□□□□□ -0.31
CNEP1R1-209ENST00000567712 IGLV5-39A0A0G2JS06 123 aa13.08□□□□□ -0.32
CNEP1R1-209ENST00000567712 TMEM218A2RU14 115 aa13.07□□□□□ -0.32
CNEP1R1-209ENST00000567712 MRPL18Q9H0U6 180 aaKnown RBP13.07□□□□□ -0.32
CNEP1R1-209ENST00000567712 ERG28Q9UKR5 140 aa13.05□□□□□ -0.32
CNEP1R1-209ENST00000567712 IGLC3P0DOY3 106 aa13.04□□□□□ -0.32
CNEP1R1-209ENST00000567712 CTAG1AP78358 180 aa13.04□□□□□ -0.32
CNEP1R1-209ENST00000567712 ZNF625Q96I27 306 aaPredicted RBP13.04□□□□□ -0.32
CNEP1R1-209ENST00000567712 H3BRM9 83 aa13.03□□□□□ -0.32
CNEP1R1-209ENST00000567712 ZNF22P17026 224 aaPredicted RBP13.03□□□□□ -0.32
CNEP1R1-209ENST00000567712 CBLN2Q8IUK8 224 aa13.03□□□□□ -0.32
CNEP1R1-209ENST00000567712 UQCC3Q6UW78 93 aa13.02□□□□□ -0.33
CNEP1R1-209ENST00000567712 A0A096LNJ9 63 aa13.01□□□□□ -0.33
CNEP1R1-209ENST00000567712 LINC01549A6NIU2 74 aa13□□□□□ -0.33
CNEP1R1-209ENST00000567712 HIGD2AQ9BW72 106 aa13□□□□□ -0.33
CNEP1R1-209ENST00000567712 KRTAP4-1Q9BYQ7 146 aa13□□□□□ -0.33
CNEP1R1-209ENST00000567712 RPL24P83731 157 aaKnown RBP12.99□□□□□ -0.33
CNEP1R1-209ENST00000567712 SPRR4Q96PI1 79 aa12.99□□□□□ -0.33
CNEP1R1-209ENST00000567712 GNB1LQ9BYB4 327 aa12.99□□□□□ -0.33
CNEP1R1-209ENST00000567712 C10orf91Q5T1B1 145 aa12.98□□□□□ -0.33
CNEP1R1-209ENST00000567712 TRAV9-1A0A075B6T8 112 aa12.97□□□□□ -0.33
CNEP1R1-209ENST00000567712 NDUFA6P56556 154 aa12.97□□□□□ -0.33
CNEP1R1-209ENST00000567712 FA2HQ7L5A8 372 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms