RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 NSD1Q96L73 2696 aaPredicted RBP4.56□□□□□ -1.68
GINS3-206ENST00000567143 COL6A5A8TX70 2615 aa4.56□□□□□ -1.68
GINS3-206ENST00000567143 IGLV5-39A0A0G2JS06 123 aa4.56□□□□□ -1.68
GINS3-206ENST00000567143 MRPL23Q16540 153 aaKnown RBP4.56□□□□□ -1.68
GINS3-206ENST00000567143 HTN3P15516 51 aa4.55□□□□□ -1.68
GINS3-206ENST00000567143 KRTAP24-1Q3LI83 254 aa4.55□□□□□ -1.68
GINS3-206ENST00000567143 WFDC9Q8NEX5 89 aa4.55□□□□□ -1.68
GINS3-206ENST00000567143 SMIM11BQ8TCY0 68 aa4.55□□□□□ -1.68
GINS3-206ENST00000567143 COX7B2Q8TF08 81 aa4.55□□□□□ -1.68
GINS3-206ENST00000567143 F5H768 121 aa4.55□□□□□ -1.68
GINS3-206ENST00000567143 BEAN1Q3B7T3 259 aa4.55□□□□□ -1.68
GINS3-206ENST00000567143 C9orf116Q5BN46 136 aaPredicted RBP4.55□□□□□ -1.68
GINS3-206ENST00000567143 IGKV2-28A0A075B6P5 120 aa4.55□□□□□ -1.68
GINS3-206ENST00000567143 A8MTW9 85 aa4.55□□□□□ -1.68
GINS3-206ENST00000567143 IGKV2D-28P01615 120 aa4.55□□□□□ -1.68
GINS3-206ENST00000567143 CCL18P55774 89 aa4.55□□□□□ -1.68
GINS3-206ENST00000567143 DNAJC30Q96LL9 226 aa4.55□□□□□ -1.68
GINS3-206ENST00000567143 EDA2RQ9HAV5 297 aa4.55□□□□□ -1.68
GINS3-206ENST00000567143 C9orf153Q5TBE3 101 aa4.54□□□□□ -1.68
GINS3-206ENST00000567143 IGLV5-45A0A087WSX0 123 aa4.53□□□□□ -1.68
GINS3-206ENST00000567143 GIG44P09565 113 aaPredicted RBP4.53□□□□□ -1.68
GINS3-206ENST00000567143 HIST1H4AP62805 103 aaKnown RBP4.53□□□□□ -1.68
GINS3-206ENST00000567143 SHISA2Q6UWI4 295 aa4.53□□□□□ -1.68
GINS3-206ENST00000567143 LINC00482Q8N8I6 264 aa4.53□□□□□ -1.68
GINS3-206ENST00000567143 GYPEP15421 78 aa4.53□□□□□ -1.68
GINS3-206ENST00000567143 MALP21145 153 aa4.53□□□□□ -1.68
GINS3-206ENST00000567143 TIMM17BO60830 172 aa4.53□□□□□ -1.68
GINS3-206ENST00000567143 LOC107984640A0A0U1RRK4 108 aa4.52□□□□□ -1.69
GINS3-206ENST00000567143 WIPF1O43516 503 aa4.52□□□□□ -1.69
GINS3-206ENST00000567143 C22orf24Q9Y442 160 aa4.52□□□□□ -1.69
GINS3-206ENST00000567143 TRBV6-8A0A0A6YYG3 113 aa4.51□□□□□ -1.69
GINS3-206ENST00000567143 TRAV13-2A0A0B4J235 113 aa4.51□□□□□ -1.69
GINS3-206ENST00000567143 TRBV10-1A0A0K0K1A3 114 aa4.51□□□□□ -1.69
GINS3-206ENST00000567143 M0QXV9 152 aa4.51□□□□□ -1.69
GINS3-206ENST00000567143 LINC00269Q8N2A0 174 aa4.51□□□□□ -1.69
GINS3-206ENST00000567143 LINC01006Q8NI28 216 aa4.51□□□□□ -1.69
GINS3-206ENST00000567143 MDFIQ99750 246 aa4.51□□□□□ -1.69
GINS3-206ENST00000567143 LINC00846Q9NV44 126 aa4.51□□□□□ -1.69
GINS3-206ENST00000567143 hADV29S1A0JD25 119 aa4.51□□□□□ -1.69
GINS3-206ENST00000567143 PLAC8L1A1L4L8 177 aa4.51□□□□□ -1.69
GINS3-206ENST00000567143 CXCL5P42830 114 aa4.51□□□□□ -1.69
GINS3-206ENST00000567143 TENM3Q9P273 2699 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 IGHV3OR16-9A0A0B4J2B5 98 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 KPRPQ5T749 579 aaPredicted RBP4.5□□□□□ -1.69
GINS3-206ENST00000567143 PPDPFQ9H3Y8 114 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 TRACP01848 142 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 ANGP03950 147 aaKnown RBP4.5□□□□□ -1.69
GINS3-206ENST00000567143 FHL2Q14192 279 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 DEFB135Q30KP9 77 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 LINC00643Q86TS7 51 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 COPS9Q8WXC6 57 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 CYSTM1Q9H1C7 97 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 LINC00959A0A1B0GUT2 108 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 FAM240AA0A1B0GVK7 77 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 PF4P02776 101 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 Q6Q795 121 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 C16orf74Q96GX8 76 aa4.5□□□□□ -1.69
GINS3-206ENST00000567143 DNAH3Q8TD57 4116 aa4.49□□□□□ -1.69
GINS3-206ENST00000567143 MGAM2Q2M2H8 2515 aa4.49□□□□□ -1.69
GINS3-206ENST00000567143 A0A1B0GX51 115 aa4.49□□□□□ -1.69
GINS3-206ENST00000567143 CFAP161Q6P656 301 aa4.49□□□□□ -1.69
GINS3-206ENST00000567143 INAFM2P0DMQ5 153 aa4.49□□□□□ -1.69
GINS3-206ENST00000567143 KRTAP10-3P60369 221 aa4.49□□□□□ -1.69
GINS3-206ENST00000567143 C6orf223Q8N319 242 aa4.49□□□□□ -1.69
GINS3-206ENST00000567143 CMYA5Q8N3K9 4069 aa4.48□□□□□ -1.69
GINS3-206ENST00000567143 TRBV7-7A0A0K0K1E9 115 aa4.48□□□□□ -1.69
GINS3-206ENST00000567143 RPL28P46779 137 aaKnown RBP4.48□□□□□ -1.69
GINS3-206ENST00000567143 CSDC2Q9Y534 153 aaKnown RBP4.48□□□□□ -1.69
GINS3-206ENST00000567143 TRAV23DV6A0A075B6W5 121 aa4.48□□□□□ -1.69
GINS3-206ENST00000567143 FAM222AQ5U5X8 452 aa4.48□□□□□ -1.69
GINS3-206ENST00000567143 CSMD3Q7Z407 3707 aa4.47□□□□□ -1.69
GINS3-206ENST00000567143 TRBV6-4A0A1B0GX49 114 aa4.47□□□□□ -1.69
GINS3-206ENST00000567143 C6orf99Q4VX62 202 aa4.47□□□□□ -1.69
GINS3-206ENST00000567143 DEFB121Q5J5C9 76 aa4.47□□□□□ -1.69
GINS3-206ENST00000567143 IL17DQ8TAD2 202 aa4.47□□□□□ -1.69
GINS3-206ENST00000567143 XAGE1AQ9HD64 81 aa4.47□□□□□ -1.69
GINS3-206ENST00000567143 A0A087WZ39 114 aa4.47□□□□□ -1.69
GINS3-206ENST00000567143 ACYP1P07311 99 aa4.47□□□□□ -1.69
GINS3-206ENST00000567143 SS18Q15532 418 aa4.47□□□□□ -1.69
GINS3-206ENST00000567143 S100A7L2Q5SY68 101 aa4.47□□□□□ -1.69
GINS3-206ENST00000567143 FAM19A1Q7Z5A9 133 aa4.46□□□□□ -1.69
GINS3-206ENST00000567143 C3orf22Q8N5N4 141 aa4.46□□□□□ -1.69
GINS3-206ENST00000567143 C10orf25Q5T742 122 aa4.46□□□□□ -1.7
GINS3-206ENST00000567143 Q8NDZ9 215 aa4.46□□□□□ -1.7
GINS3-206ENST00000567143 ORMDL1Q9P0S3 153 aa4.46□□□□□ -1.7
GINS3-206ENST00000567143 IBA57-AS1B1ANH7 110 aa4.46□□□□□ -1.7
GINS3-206ENST00000567143 RPL18AQ02543 176 aaKnown RBP4.46□□□□□ -1.7
GINS3-206ENST00000567143 ENHOQ6UWT2 76 aa4.46□□□□□ -1.7
GINS3-206ENST00000567143 UNQ6190/PRO20217Q6UXQ8 127 aa4.46□□□□□ -1.7
GINS3-206ENST00000567143 CSNK1G2-AS1Q8NCQ2 148 aa4.46□□□□□ -1.7
GINS3-206ENST00000567143 KIR2DL5BQ8NHK3 375 aa4.46□□□□□ -1.7
GINS3-206ENST00000567143 C19orf73Q9NVV2 129 aa4.46□□□□□ -1.7
GINS3-206ENST00000567143 LAMTOR3Q9UHA4 124 aa4.46□□□□□ -1.7
GINS3-206ENST00000567143 TRAV25A0A0B4J276 109 aa4.45□□□□□ -1.7
GINS3-206ENST00000567143 IGLV1-51P01701 117 aa4.45□□□□□ -1.7
GINS3-206ENST00000567143 SCXQ7RTU7 201 aa4.45□□□□□ -1.7
GINS3-206ENST00000567143 CHCHD10Q8WYQ3 142 aaPredicted RBP4.45□□□□□ -1.7
GINS3-206ENST00000567143 DSCR8Q96T75 97 aa4.45□□□□□ -1.7
GINS3-206ENST00000567143 KLK12Q9UKR0 248 aa4.45□□□□□ -1.7
GINS3-206ENST00000567143 HAMPP81172 84 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms