RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 VCX2Q9H322 139 aa7.25□□□□□ -1.25
UBR1-206ENST00000566493 RNF213Q63HN8 5207 aa7.25□□□□□ -1.25
UBR1-206ENST00000566493 C2orf82Q6UX34 121 aa7.24□□□□□ -1.25
UBR1-206ENST00000566493 C2orf66Q6UXQ4 117 aa7.24□□□□□ -1.25
UBR1-206ENST00000566493 KRTAP11-1Q8IUC1 163 aa7.24□□□□□ -1.25
UBR1-206ENST00000566493 Q8N8P6 123 aa7.24□□□□□ -1.25
UBR1-206ENST00000566493 MT-ND4LP03901 98 aa7.23□□□□□ -1.25
UBR1-206ENST00000566493 CKS1BP61024 79 aa7.23□□□□□ -1.25
UBR1-206ENST00000566493 PNRC1Q12796 327 aaPredicted RBP7.23□□□□□ -1.25
UBR1-206ENST00000566493 ORMDL2Q53FV1 153 aa7.23□□□□□ -1.25
UBR1-206ENST00000566493 TOMM7Q9P0U1 55 aa7.23□□□□□ -1.25
UBR1-206ENST00000566493 IGLV1-50A0A075B6I6 118 aa7.22□□□□□ -1.25
UBR1-206ENST00000566493 K7EMI3 77 aa7.22□□□□□ -1.25
UBR1-206ENST00000566493 C6orf226Q5I0X4 101 aa7.22□□□□□ -1.25
UBR1-206ENST00000566493 ZC2HC1BQ5TFG8 222 aa7.22□□□□□ -1.25
UBR1-206ENST00000566493 AMELXQ99217 191 aa7.22□□□□□ -1.25
UBR1-206ENST00000566493 NPSP0C0P6 89 aa7.21□□□□□ -1.26
UBR1-206ENST00000566493 G0S2P27469 103 aa7.21□□□□□ -1.26
UBR1-206ENST00000566493 PAPPA-AS1Q5QFB9 102 aa7.21□□□□□ -1.26
UBR1-206ENST00000566493 C9orf129Q5T035 196 aaKnown RBP7.21□□□□□ -1.26
UBR1-206ENST00000566493 LCE1DQ5T752 114 aa7.21□□□□□ -1.26
UBR1-206ENST00000566493 KRTAP7-1Q8IUC3 87 aa7.21□□□□□ -1.26
UBR1-206ENST00000566493 RAB14P61106 215 aa7.2□□□□□ -1.26
UBR1-206ENST00000566493 SEC11AP67812 179 aa7.2□□□□□ -1.26
UBR1-206ENST00000566493 IFITM2Q01629 132 aa7.2□□□□□ -1.26
UBR1-206ENST00000566493 LCE4AQ5TA78 99 aa7.2□□□□□ -1.26
UBR1-206ENST00000566493 LINC00173Q6ZV60 143 aa7.2□□□□□ -1.26
UBR1-206ENST00000566493 Q8IZM0 81 aa7.2□□□□□ -1.26
UBR1-206ENST00000566493 ALKBH7Q9BT30 221 aaPredicted RBP7.2□□□□□ -1.26
UBR1-206ENST00000566493 CTDSP1Q9GZU7 261 aa7.2□□□□□ -1.26
UBR1-206ENST00000566493 NXT2Q9NPJ8 142 aaKnown RBP7.2□□□□□ -1.26
UBR1-206ENST00000566493 IGIPA6NJ69 53 aa7.19□□□□□ -1.26
UBR1-206ENST00000566493 RPL13AP40429 203 aaKnown RBP7.19□□□□□ -1.26
UBR1-206ENST00000566493 HERVK_113P63121 156 aa7.19□□□□□ -1.26
UBR1-206ENST00000566493 LBHQ53QV2 105 aaPredicted RBP7.19□□□□□ -1.26
UBR1-206ENST00000566493 LINC00469Q8N7U9 141 aa7.19□□□□□ -1.26
UBR1-206ENST00000566493 GEMIN7Q9H840 131 aaKnown RBP7.19□□□□□ -1.26
UBR1-206ENST00000566493 NUPR1O60356 82 aa7.18□□□□□ -1.26
UBR1-206ENST00000566493 KRTAP1-4P0C5Y4 121 aa7.18□□□□□ -1.26
UBR1-206ENST00000566493 FAM19A3Q7Z5A8 133 aa7.18□□□□□ -1.26
UBR1-206ENST00000566493 C22orf24Q9Y442 160 aa7.18□□□□□ -1.26
UBR1-206ENST00000566493 ZNF861PO60384 105 aa7.17□□□□□ -1.26
UBR1-206ENST00000566493 LINC00310P59036 64 aa7.17□□□□□ -1.26
UBR1-206ENST00000566493 C21orf62-AS1Q17RA5 79 aa7.17□□□□□ -1.26
UBR1-206ENST00000566493 XAGE1AQ9HD64 81 aa7.17□□□□□ -1.26
UBR1-206ENST00000566493 CDKN2A-AS1Q9UH64 79 aa7.17□□□□□ -1.26
UBR1-206ENST00000566493 CARHSP1Q9Y2V2 147 aaKnown RBP7.17□□□□□ -1.26
UBR1-206ENST00000566493 LPAP08519 4548 aa7.17□□□□□ -1.26
UBR1-206ENST00000566493 F8VRH5 84 aa7.16□□□□□ -1.26
UBR1-206ENST00000566493 KRTAP19-4Q3LI73 84 aa7.16□□□□□ -1.26
UBR1-206ENST00000566493 TIMM17AQ99595 171 aa7.16□□□□□ -1.26
UBR1-206ENST00000566493 CXCL5P42830 114 aa7.15□□□□□ -1.26
UBR1-206ENST00000566493 TOMM6Q96B49 74 aa7.15□□□□□ -1.26
UBR1-206ENST00000566493 PRR4Q16378 134 aa7.14□□□□□ -1.27
UBR1-206ENST00000566493 ERASQ7Z444 233 aa7.14□□□□□ -1.27
UBR1-206ENST00000566493 SCGB3A1Q96QR1 104 aa7.14□□□□□ -1.27
UBR1-206ENST00000566493 KIAA1644Q3SXP7 199 aa7.13□□□□□ -1.27
UBR1-206ENST00000566493 MRPL55Q7Z7F7 128 aaKnown RBP7.13□□□□□ -1.27
UBR1-206ENST00000566493 CDIP1Q9H305 208 aa7.13□□□□□ -1.27
UBR1-206ENST00000566493 TP73-AS1Q9UF72 201 aa7.13□□□□□ -1.27
UBR1-206ENST00000566493 LINC01549A6NIU2 74 aa7.12□□□□□ -1.27
UBR1-206ENST00000566493 RPL28P46779 137 aaKnown RBP7.12□□□□□ -1.27
UBR1-206ENST00000566493 PDZD11Q5EBL8 140 aa7.12□□□□□ -1.27
UBR1-206ENST00000566493 SLC7A5P1Q8MH63 180 aa7.12□□□□□ -1.27
UBR1-206ENST00000566493 COX7B2Q8TF08 81 aa7.12□□□□□ -1.27
UBR1-206ENST00000566493 TRAV9-1A0A075B6T8 112 aa7.11□□□□□ -1.27
UBR1-206ENST00000566493 TINCRA0A1B0GVN0 87 aa7.11□□□□□ -1.27
UBR1-206ENST00000566493 BCE1O60756 84 aa7.11□□□□□ -1.27
UBR1-206ENST00000566493 KRTAP4-7Q9BYR0 210 aa7.11□□□□□ -1.27
UBR1-206ENST00000566493 RPL37AP8A6NKH3 93 aa7.1□□□□□ -1.27
UBR1-206ENST00000566493 SMIM1B2RUZ4 78 aa7.1□□□□□ -1.27
UBR1-206ENST00000566493 TSPAN13O95857 204 aa7.09□□□□□ -1.27
UBR1-206ENST00000566493 ADCYAP1P18509 176 aa7.09□□□□□ -1.27
UBR1-206ENST00000566493 S100PP25815 95 aa7.09□□□□□ -1.27
UBR1-206ENST00000566493 RAB5BP61020 215 aa7.09□□□□□ -1.27
UBR1-206ENST00000566493 CLLU1Q5K131 121 aa7.09□□□□□ -1.27
UBR1-206ENST00000566493 LINC00167Q96N53 147 aa7.09□□□□□ -1.27
UBR1-206ENST00000566493 CST9LQ9H4G1 147 aa7.09□□□□□ -1.27
UBR1-206ENST00000566493 IGLV5-45A0A087WSX0 123 aa7.08□□□□□ -1.28
UBR1-206ENST00000566493 GAGE10A6NGK3 116 aa7.08□□□□□ -1.28
UBR1-206ENST00000566493 H3BRM9 83 aa7.08□□□□□ -1.28
UBR1-206ENST00000566493 SPINK8P0C7L1 97 aa7.08□□□□□ -1.28
UBR1-206ENST00000566493 CRYGAP11844 174 aa7.08□□□□□ -1.28
UBR1-206ENST00000566493 PMVKQ15126 192 aa7.08□□□□□ -1.28
UBR1-206ENST00000566493 NKAPP1Q8N9T2 125 aa7.08□□□□□ -1.28
UBR1-206ENST00000566493 GNB1LQ9BYB4 327 aa7.08□□□□□ -1.28
UBR1-206ENST00000566493 SMCO4Q9NRQ5 59 aa7.08□□□□□ -1.28
UBR1-206ENST00000566493 UQCC3Q6UW78 93 aa7.07□□□□□ -1.28
UBR1-206ENST00000566493 FA2HQ7L5A8 372 aa7.07□□□□□ -1.28
UBR1-206ENST00000566493 TYMSOSQ8TAI1 123 aa7.07□□□□□ -1.28
UBR1-206ENST00000566493 TMEM218A2RU14 115 aa7.06□□□□□ -1.28
UBR1-206ENST00000566493 LINC01546A6NGU7 62 aa7.06□□□□□ -1.28
UBR1-206ENST00000566493 KRTAP9-7A8MTY7 169 aa7.06□□□□□ -1.28
UBR1-206ENST00000566493 ATP5LO75964 103 aa7.06□□□□□ -1.28
UBR1-206ENST00000566493 UBE2AP49459 152 aa7.06□□□□□ -1.28
UBR1-206ENST00000566493 COX19Q49B96 90 aa7.06□□□□□ -1.28
UBR1-206ENST00000566493 IGLV5-37A0A075B6J1 123 aa7.05□□□□□ -1.28
UBR1-206ENST00000566493 A0A087X002 238 aa7.05□□□□□ -1.28
UBR1-206ENST00000566493 NDUFA6P56556 154 aa7.04□□□□□ -1.28
UBR1-206ENST00000566493 FABP9Q0Z7S8 132 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms