RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 REG3AQ06141 175 aa11.43□□□□□ -0.58
RAB40C-210ENST00000566290 VAMP3Q15836 100 aa11.43□□□□□ -0.58
RAB40C-210ENST00000566290 Q8IZM0 81 aa11.43□□□□□ -0.58
RAB40C-210ENST00000566290 H3BUT2 72 aa11.42□□□□□ -0.58
RAB40C-210ENST00000566290 GTF2H5Q6ZYL4 71 aa11.42□□□□□ -0.58
RAB40C-210ENST00000566290 LINC00476Q8WZB0 136 aa11.42□□□□□ -0.58
RAB40C-210ENST00000566290 TRAV8-4A0A0B4J246 113 aa11.41□□□□□ -0.58
RAB40C-210ENST00000566290 K7EP34 96 aa11.41□□□□□ -0.58
RAB40C-210ENST00000566290 K7ERJ3 54 aa11.41□□□□□ -0.58
RAB40C-210ENST00000566290 FABP2P12104 132 aa11.41□□□□□ -0.58
RAB40C-210ENST00000566290 CXCL5P42830 114 aa11.41□□□□□ -0.58
RAB40C-210ENST00000566290 NANOS2P60321 138 aaKnown RBP11.41□□□□□ -0.58
RAB40C-210ENST00000566290 LINC00269Q8N2A0 174 aa11.41□□□□□ -0.58
RAB40C-210ENST00000566290 LY6G6CO95867 125 aa11.4□□□□□ -0.58
RAB40C-210ENST00000566290 ANGP03950 147 aaKnown RBP11.4□□□□□ -0.58
RAB40C-210ENST00000566290 MUSTN1Q8IVN3 82 aa11.4□□□□□ -0.58
RAB40C-210ENST00000566290 A4D1N5 150 aa11.39□□□□□ -0.59
RAB40C-210ENST00000566290 IBA57-AS1B1ANH7 110 aa11.39□□□□□ -0.59
RAB40C-210ENST00000566290 CFC1BP0CG36 223 aa11.39□□□□□ -0.59
RAB40C-210ENST00000566290 CFC1P0CG37 223 aa11.39□□□□□ -0.59
RAB40C-210ENST00000566290 ADAMTSL4-AS1Q5T5F5 129 aa11.39□□□□□ -0.59
RAB40C-210ENST00000566290 LYRM7Q5U5X0 104 aa11.39□□□□□ -0.59
RAB40C-210ENST00000566290 CHCHD10Q8WYQ3 142 aaPredicted RBP11.39□□□□□ -0.59
RAB40C-210ENST00000566290 RAB37Q96AX2 223 aa11.39□□□□□ -0.59
RAB40C-210ENST00000566290 COX7A2LO14548 114 aa11.38□□□□□ -0.59
RAB40C-210ENST00000566290 PRO1854Q9UHT4 67 aa11.38□□□□□ -0.59
RAB40C-210ENST00000566290 LINC01556Q5JQF7 62 aa11.37□□□□□ -0.59
RAB40C-210ENST00000566290 IGKV3OR2-268A0A0C4DH90 116 aa11.36□□□□□ -0.59
RAB40C-210ENST00000566290 GAGE10A6NGK3 116 aa11.36□□□□□ -0.59
RAB40C-210ENST00000566290 XCL1P47992 114 aa11.36□□□□□ -0.59
RAB40C-210ENST00000566290 FOXI1Q12951 378 aa11.36□□□□□ -0.59
RAB40C-210ENST00000566290 PGPEP1Q9NXJ5 209 aa11.36□□□□□ -0.59
RAB40C-210ENST00000566290 C5orf38Q86SI9 138 aa11.35□□□□□ -0.59
RAB40C-210ENST00000566290 LINC00308Q8TCZ7 52 aa11.35□□□□□ -0.59
RAB40C-210ENST00000566290 KLK5Q9Y337 293 aaPredicted RBP11.35□□□□□ -0.59
RAB40C-210ENST00000566290 SPCS1Q9Y6A9 102 aa11.35□□□□□ -0.59
RAB40C-210ENST00000566290 NUPR2A6NF83 97 aa11.34□□□□□ -0.59
RAB40C-210ENST00000566290 APOMO95445 188 aa11.34□□□□□ -0.59
RAB40C-210ENST00000566290 TSPAN13O95857 204 aa11.34□□□□□ -0.59
RAB40C-210ENST00000566290 IGHV3-33P01772 117 aa11.34□□□□□ -0.59
RAB40C-210ENST00000566290 DNAH10OSP0CZ25 163 aa11.33□□□□□ -0.6
RAB40C-210ENST00000566290 KIAA0087Q14695 138 aa11.33□□□□□ -0.6
RAB40C-210ENST00000566290 ESRGQ1W209 222 aa11.33□□□□□ -0.6
RAB40C-210ENST00000566290 MEIG1Q5JSS6 88 aa11.33□□□□□ -0.6
RAB40C-210ENST00000566290 ENHOQ6UWT2 76 aa11.33□□□□□ -0.6
RAB40C-210ENST00000566290 EIF4EBP3O60516 100 aaPredicted RBP11.32□□□□□ -0.6
RAB40C-210ENST00000566290 CRPP02741 224 aa11.32□□□□□ -0.6
RAB40C-210ENST00000566290 PRSS2P07478 247 aa11.32□□□□□ -0.6
RAB40C-210ENST00000566290 COX17Q14061 63 aa11.32□□□□□ -0.6
RAB40C-210ENST00000566290 VPS13DQ5THJ4 4388 aa11.31□□□□□ -0.6
RAB40C-210ENST00000566290 LOC107984156A0A0G2JMH3 177 aa11.31□□□□□ -0.6
RAB40C-210ENST00000566290 C6orf226Q5I0X4 101 aa11.31□□□□□ -0.6
RAB40C-210ENST00000566290 CLPSL2Q6UWE3 100 aa11.31□□□□□ -0.6
RAB40C-210ENST00000566290 WFDC10BQ8IUB3 73 aa11.31□□□□□ -0.6
RAB40C-210ENST00000566290 ARL17AQ8IVW1 177 aa11.31□□□□□ -0.6
RAB40C-210ENST00000566290 Q8N3U1 123 aa11.31□□□□□ -0.6
RAB40C-210ENST00000566290 KLK12Q9UKR0 248 aa11.31□□□□□ -0.6
RAB40C-210ENST00000566290 TRBV20-1A0A075B6N2 111 aa11.3□□□□□ -0.6
RAB40C-210ENST00000566290 UPK3BQ9BT76 320 aa11.3□□□□□ -0.6
RAB40C-210ENST00000566290 TOMM7Q9P0U1 55 aa11.3□□□□□ -0.6
RAB40C-210ENST00000566290 F8WDY8 70 aa11.29□□□□□ -0.6
RAB40C-210ENST00000566290 ERG28Q9UKR5 140 aa11.29□□□□□ -0.6
RAB40C-210ENST00000566290 TRBV30A0A0K0K1B3 111 aa11.28□□□□□ -0.6
RAB40C-210ENST00000566290 MALP21145 153 aa11.28□□□□□ -0.6
RAB40C-210ENST00000566290 CFAP161Q6P656 301 aa11.28□□□□□ -0.6
RAB40C-210ENST00000566290 KRTAP26-1Q6PEX3 210 aa11.28□□□□□ -0.6
RAB40C-210ENST00000566290 NAA38Q9BRA0 125 aaKnown RBP11.28□□□□□ -0.6
RAB40C-210ENST00000566290 GVQW2A0A096LPI5 108 aaPredicted RBP11.27□□□□□ -0.61
RAB40C-210ENST00000566290 GAGE12HA6NDE8 117 aa11.27□□□□□ -0.61
RAB40C-210ENST00000566290 SOSTDC1Q6X4U4 206 aa11.27□□□□□ -0.61
RAB40C-210ENST00000566290 CKS1BP61024 79 aa11.26□□□□□ -0.61
RAB40C-210ENST00000566290 DYNC1H1Q14204 4646 aaKnown RBP11.25□□□□□ -0.61
RAB40C-210ENST00000566290 MIR7-3HGQ8N6C7 128 aa11.25□□□□□ -0.61
RAB40C-210ENST00000566290 UBE2WQ96B02 151 aa11.25□□□□□ -0.61
RAB40C-210ENST00000566290 KRTAP4-5Q9BYR2 181 aa11.25□□□□□ -0.61
RAB40C-210ENST00000566290 IGLV10-54A0A075B6I4 117 aa11.24□□□□□ -0.61
RAB40C-210ENST00000566290 CCL18P55774 89 aa11.24□□□□□ -0.61
RAB40C-210ENST00000566290 APLNQ9ULZ1 77 aa11.24□□□□□ -0.61
RAB40C-210ENST00000566290 F8W1H4 67 aa11.23□□□□□ -0.61
RAB40C-210ENST00000566290 SPAG11BQ08648 103 aa11.23□□□□□ -0.61
RAB40C-210ENST00000566290 DAND5Q8N907 189 aa11.23□□□□□ -0.61
RAB40C-210ENST00000566290 TRAV13-2A0A0B4J235 113 aa11.22□□□□□ -0.61
RAB40C-210ENST00000566290 LINC00158P58513 81 aa11.22□□□□□ -0.61
RAB40C-210ENST00000566290 NDUFC2O95298 119 aa11.21□□□□□ -0.61
RAB40C-210ENST00000566290 C2orf48Q96LS8 159 aa11.21□□□□□ -0.61
RAB40C-210ENST00000566290 LINC00588Q9Y4M8 146 aa11.21□□□□□ -0.61
RAB40C-210ENST00000566290 DNAH11Q96DT5 4516 aa11.21□□□□□ -0.62
RAB40C-210ENST00000566290 M0QXV9 152 aa11.2□□□□□ -0.62
RAB40C-210ENST00000566290 NTN5Q8WTR8 489 aaPredicted RBP11.2□□□□□ -0.62
RAB40C-210ENST00000566290 LINC01600Q96MT4 127 aa11.2□□□□□ -0.62
RAB40C-210ENST00000566290 C1orf43Q9BWL3 253 aa11.2□□□□□ -0.62
RAB40C-210ENST00000566290 PKHD1P08F94 4074 aa11.2□□□□□ -0.62
RAB40C-210ENST00000566290 FAT2Q9NYQ8 4349 aa11.19□□□□□ -0.62
RAB40C-210ENST00000566290 COX6CP09669 75 aa11.19□□□□□ -0.62
RAB40C-210ENST00000566290 RPL13AP40429 203 aaKnown RBP11.19□□□□□ -0.62
RAB40C-210ENST00000566290 SND1-IT1Q9HBX3 110 aa11.19□□□□□ -0.62
RAB40C-210ENST00000566290 NPC2P61916 151 aa11.18□□□□□ -0.62
RAB40C-210ENST00000566290 C2orf82Q6UX34 121 aa11.18□□□□□ -0.62
RAB40C-210ENST00000566290 PRO0461Q9UI25 63 aa11.18□□□□□ -0.62
RAB40C-210ENST00000566290 DNAH2Q9P225 4427 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms