RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 TSPEAR-AS2P59090 65 aa6.6□□□□□ -1.35
SF3B3-207ENST00000566095 RPL24P83731 157 aaKnown RBP6.6□□□□□ -1.35
SF3B3-207ENST00000566095 FOXI1Q12951 378 aa6.6□□□□□ -1.35
SF3B3-207ENST00000566095 SRSF9Q13242 221 aaKnown RBP eCLIP6.6□□□□□ -1.35
SF3B3-207ENST00000566095 COX17Q14061 63 aa6.6□□□□□ -1.35
SF3B3-207ENST00000566095 HIST1H4GQ99525 98 aa6.6□□□□□ -1.35
SF3B3-207ENST00000566095 EREGO14944 169 aa6.59□□□□□ -1.35
SF3B3-207ENST00000566095 SPINK8P0C7L1 97 aa6.59□□□□□ -1.35
SF3B3-207ENST00000566095 HINT1P49773 126 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-207ENST00000566095 C5orf38Q86SI9 138 aa6.59□□□□□ -1.35
SF3B3-207ENST00000566095 COX7B2Q8TF08 81 aa6.59□□□□□ -1.35
SF3B3-207ENST00000566095 IGHV3-64A0A075B6Q5 118 aa6.58□□□□□ -1.36
SF3B3-207ENST00000566095 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-207ENST00000566095 ZNF561-AS1K7EIQ3 104 aa6.58□□□□□ -1.36
SF3B3-207ENST00000566095 CKS1BP61024 79 aa6.58□□□□□ -1.36
SF3B3-207ENST00000566095 C6orf226Q5I0X4 101 aa6.58□□□□□ -1.36
SF3B3-207ENST00000566095 TTTY13Q9BZ97 58 aa6.58□□□□□ -1.36
SF3B3-207ENST00000566095 PKIGQ9Y2B9 76 aa6.58□□□□□ -1.36
SF3B3-207ENST00000566095 DNAH7Q8WXX0 4024 aa6.58□□□□□ -1.36
SF3B3-207ENST00000566095 DYNC2H1Q8NCM8 4307 aaKnown RBP6.57□□□□□ -1.36
SF3B3-207ENST00000566095 LOC107984156A0A0G2JMH3 177 aa6.57□□□□□ -1.36
SF3B3-207ENST00000566095 C1orf134Q5TEV5 83 aa6.57□□□□□ -1.36
SF3B3-207ENST00000566095 ARL17AQ8IVW1 177 aa6.57□□□□□ -1.36
SF3B3-207ENST00000566095 C6orf223Q8N319 242 aa6.57□□□□□ -1.36
SF3B3-207ENST00000566095 LITAFQ99732 161 aa6.57□□□□□ -1.36
SF3B3-207ENST00000566095 TOMM7Q9P0U1 55 aa6.57□□□□□ -1.36
SF3B3-207ENST00000566095 GVQW2A0A096LPI5 108 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-207ENST00000566095 SMIM13P0DJ93 91 aa6.56□□□□□ -1.36
SF3B3-207ENST00000566095 SPAG11BQ08648 103 aa6.56□□□□□ -1.36
SF3B3-207ENST00000566095 A0A0B4J2C4 111 aa6.55□□□□□ -1.36
SF3B3-207ENST00000566095 MEIG1Q5JSS6 88 aa6.55□□□□□ -1.36
SF3B3-207ENST00000566095 C2orf48Q96LS8 159 aa6.55□□□□□ -1.36
SF3B3-207ENST00000566095 LCE6AA0A183 80 aa6.54□□□□□ -1.36
SF3B3-207ENST00000566095 M0R2N4 97 aa6.54□□□□□ -1.36
SF3B3-207ENST00000566095 KIAA0087Q14695 138 aa6.54□□□□□ -1.36
SF3B3-207ENST00000566095 KRTAP26-1Q6PEX3 210 aa6.54□□□□□ -1.36
SF3B3-207ENST00000566095 Q6ZR54 194 aa6.54□□□□□ -1.36
SF3B3-207ENST00000566095 C9orf118A6NHY6 69 aa6.53□□□□□ -1.36
SF3B3-207ENST00000566095 USP17L23D6RBM5 183 aa6.53□□□□□ -1.36
SF3B3-207ENST00000566095 FXYD2P54710 66 aa6.53□□□□□ -1.36
SF3B3-207ENST00000566095 BATFQ16520 125 aa6.53□□□□□ -1.36
SF3B3-207ENST00000566095 LYRM7Q5U5X0 104 aa6.53□□□□□ -1.36
SF3B3-207ENST00000566095 CAMK2N2Q96S95 79 aa6.53□□□□□ -1.36
SF3B3-207ENST00000566095 TRBV30A0A0K0K1B3 111 aa6.52□□□□□ -1.37
SF3B3-207ENST00000566095 TAX1BP3O14907 124 aa6.52□□□□□ -1.37
SF3B3-207ENST00000566095 KRTAP1-5Q9BYS1 174 aa6.52□□□□□ -1.37
SF3B3-207ENST00000566095 TENM2Q9NT68 2774 aa6.52□□□□□ -1.37
SF3B3-207ENST00000566095 STARD9Q9P2P6 4700 aa6.52□□□□□ -1.37
SF3B3-207ENST00000566095 RNF151Q2KHN1 245 aa6.51□□□□□ -1.37
SF3B3-207ENST00000566095 NTN5Q8WTR8 489 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-207ENST00000566095 PRO1854Q9UHT4 67 aa6.51□□□□□ -1.37
SF3B3-207ENST00000566095 NDUFC2O95298 119 aa6.5□□□□□ -1.37
SF3B3-207ENST00000566095 SYCNQ0VAF6 134 aa6.5□□□□□ -1.37
SF3B3-207ENST00000566095 HIGD2BQ4VC39 106 aa6.5□□□□□ -1.37
SF3B3-207ENST00000566095 MUSTN1Q8IVN3 82 aa6.5□□□□□ -1.37
SF3B3-207ENST00000566095 C15orf56Q8N910 161 aa6.5□□□□□ -1.37
SF3B3-207ENST00000566095 LINC00308Q8TCZ7 52 aa6.5□□□□□ -1.37
SF3B3-207ENST00000566095 NHP2Q9NX24 153 aaKnown RBP6.5□□□□□ -1.37
SF3B3-207ENST00000566095 ERG28Q9UKR5 140 aa6.5□□□□□ -1.37
SF3B3-207ENST00000566095 PLECQ15149 4684 aaKnown RBP6.5□□□□□ -1.37
SF3B3-207ENST00000566095 A4D1N5 150 aa6.49□□□□□ -1.37
SF3B3-207ENST00000566095 ADAMTSL4-AS1Q5T5F5 129 aa6.49□□□□□ -1.37
SF3B3-207ENST00000566095 CARD19Q96LW7 228 aa6.49□□□□□ -1.37
SF3B3-207ENST00000566095 CSMD3Q7Z407 3707 aa6.49□□□□□ -1.37
SF3B3-207ENST00000566095 CFC1BP0CG36 223 aa6.48□□□□□ -1.37
SF3B3-207ENST00000566095 CFC1P0CG37 223 aa6.48□□□□□ -1.37
SF3B3-207ENST00000566095 LINC00336Q6ZUF6 198 aa6.48□□□□□ -1.37
SF3B3-207ENST00000566095 GTF2H5Q6ZYL4 71 aa6.48□□□□□ -1.37
SF3B3-207ENST00000566095 TRBV20-1A0A075B6N2 111 aa6.47□□□□□ -1.37
SF3B3-207ENST00000566095 TRAV13-2A0A0B4J235 113 aa6.47□□□□□ -1.37
SF3B3-207ENST00000566095 FABP2P12104 132 aa6.47□□□□□ -1.37
SF3B3-207ENST00000566095 LINC00158P58513 81 aa6.47□□□□□ -1.37
SF3B3-207ENST00000566095 CNBPP62633 177 aaKnown RBP6.47□□□□□ -1.37
SF3B3-207ENST00000566095 Q6ZRN7 208 aaPredicted RBP6.47□□□□□ -1.37
SF3B3-207ENST00000566095 RAB37Q96AX2 223 aa6.47□□□□□ -1.37
SF3B3-207ENST00000566095 ALMS1Q8TCU4 4167 aa6.47□□□□□ -1.37
SF3B3-207ENST00000566095 A0A1B0GV90 55 aa6.46□□□□□ -1.38
SF3B3-207ENST00000566095 A0A1W2PPM0 123 aa6.46□□□□□ -1.38
SF3B3-207ENST00000566095 TLX1NBP0CAT3 122 aa6.46□□□□□ -1.38
SF3B3-207ENST00000566095 C2orf82Q6UX34 121 aa6.46□□□□□ -1.38
SF3B3-207ENST00000566095 CBY1Q9Y3M2 126 aa6.46□□□□□ -1.38
SF3B3-207ENST00000566095 VPS13DQ5THJ4 4388 aa6.45□□□□□ -1.38
SF3B3-207ENST00000566095 A0A087WTM6 91 aa6.45□□□□□ -1.38
SF3B3-207ENST00000566095 LECT2O14960 151 aa6.45□□□□□ -1.38
SF3B3-207ENST00000566095 UBE2V1Q13404 147 aa6.45□□□□□ -1.38
SF3B3-207ENST00000566095 MIR7-3HGQ8N6C7 128 aa6.45□□□□□ -1.38
SF3B3-207ENST00000566095 Q8N814 137 aa6.45□□□□□ -1.38
SF3B3-207ENST00000566095 TRBV10-2A0A0K0K1G8 114 aa6.44□□□□□ -1.38
SF3B3-207ENST00000566095 LOC107984640A0A0U1RRK4 108 aa6.44□□□□□ -1.38
SF3B3-207ENST00000566095 LRCOL1A6NCL2 159 aa6.44□□□□□ -1.38
SF3B3-207ENST00000566095 NDUFC2-KCTD14E9PQ53 114 aa6.44□□□□□ -1.38
SF3B3-207ENST00000566095 COX6CP09669 75 aa6.44□□□□□ -1.38
SF3B3-207ENST00000566095 PFN2P35080 140 aa6.44□□□□□ -1.38
SF3B3-207ENST00000566095 UNQ6190/PRO20217Q6UXQ8 127 aa6.44□□□□□ -1.38
SF3B3-207ENST00000566095 Q6ZRU5 148 aa6.44□□□□□ -1.38
SF3B3-207ENST00000566095 PGPEP1Q9NXJ5 209 aa6.44□□□□□ -1.38
SF3B3-207ENST00000566095 LINC00474Q9P2X8 69 aa6.44□□□□□ -1.38
SF3B3-207ENST00000566095 H3BUT2 72 aa6.43□□□□□ -1.38
SF3B3-207ENST00000566095 SND1-IT1Q9HBX3 110 aa6.43□□□□□ -1.38
SF3B3-207ENST00000566095 C6orf48Q9UBA6 75 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms