RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 XAGE1AQ9HD64 81 aa7.51□□□□□ -1.21
USB1-212ENST00000566082 C5orf47Q569G3 176 aa7.51□□□□□ -1.21
USB1-212ENST00000566082 C11orf72Q8NBR9 251 aa7.51□□□□□ -1.21
USB1-212ENST00000566082 CAMK2N2Q96S95 79 aa7.51□□□□□ -1.21
USB1-212ENST00000566082 C1orf43Q9BWL3 253 aa7.51□□□□□ -1.21
USB1-212ENST00000566082 IGHV4-28A0A0C4DH34 117 aa7.5□□□□□ -1.21
USB1-212ENST00000566082 REG3AQ06141 175 aa7.5□□□□□ -1.21
USB1-212ENST00000566082 NTM-AS1Q6ZSK4 140 aa7.5□□□□□ -1.21
USB1-212ENST00000566082 NKAPP1Q8N9T2 125 aa7.5□□□□□ -1.21
USB1-212ENST00000566082 PRORYQ9H606 182 aa7.5□□□□□ -1.21
USB1-212ENST00000566082 PLA2G2AP14555 144 aa7.5□□□□□ -1.21
USB1-212ENST00000566082 CSDC2Q9Y534 153 aaKnown RBP7.5□□□□□ -1.21
USB1-212ENST00000566082 MRAPQ8TCY5 172 aa7.5□□□□□ -1.21
USB1-212ENST00000566082 DIRC1Q969H9 104 aa7.5□□□□□ -1.21
USB1-212ENST00000566082 FAM19A5Q7Z5A7 132 aaPredicted RBP7.49□□□□□ -1.21
USB1-212ENST00000566082 BBC3Q96PG8 261 aaPredicted RBP7.49□□□□□ -1.21
USB1-212ENST00000566082 LRBAP50851 2863 aa7.49□□□□□ -1.21
USB1-212ENST00000566082 FAM236DA0A1B0GTK5 79 aa7.49□□□□□ -1.21
USB1-212ENST00000566082 FAM236CP0DP71 79 aa7.49□□□□□ -1.21
USB1-212ENST00000566082 C9orf116Q5BN46 136 aaPredicted RBP7.49□□□□□ -1.21
USB1-212ENST00000566082 Q6ZQY7 126 aa7.49□□□□□ -1.21
USB1-212ENST00000566082 APOC4P55056 127 aa7.48□□□□□ -1.21
USB1-212ENST00000566082 ATP5EP2Q5VTU8 51 aa7.48□□□□□ -1.21
USB1-212ENST00000566082 SNURFQ9Y675 71 aa7.48□□□□□ -1.21
USB1-212ENST00000566082 A0A087WZ39 114 aa7.47□□□□□ -1.21
USB1-212ENST00000566082 NREPQ16612 68 aa7.47□□□□□ -1.21
USB1-212ENST00000566082 SVEP1Q4LDE5 3571 aa7.47□□□□□ -1.21
USB1-212ENST00000566082 IGLV5-45A0A087WSX0 123 aa7.47□□□□□ -1.21
USB1-212ENST00000566082 CCKP06307 115 aa7.47□□□□□ -1.21
USB1-212ENST00000566082 HILS1P60008 231 aa7.47□□□□□ -1.21
USB1-212ENST00000566082 HIGD2BQ4VC39 106 aa7.47□□□□□ -1.21
USB1-212ENST00000566082 FAM19A1Q7Z5A9 133 aa7.47□□□□□ -1.21
USB1-212ENST00000566082 DPH3Q96FX2 82 aa7.47□□□□□ -1.21
USB1-212ENST00000566082 SMCR5Q8TEV8 140 aa7.46□□□□□ -1.21
USB1-212ENST00000566082 SMIM9A6NGZ8 99 aa7.46□□□□□ -1.22
USB1-212ENST00000566082 IGKV2D-24A0A075B6R9 120 aa7.46□□□□□ -1.22
USB1-212ENST00000566082 LINC00482Q8N8I6 264 aa7.46□□□□□ -1.22
USB1-212ENST00000566082 PRB2P02812 416 aaPredicted RBP7.45□□□□□ -1.22
USB1-212ENST00000566082 HRCT1Q6UXD1 115 aa7.45□□□□□ -1.22
USB1-212ENST00000566082 COX7BP24311 80 aa7.45□□□□□ -1.22
USB1-212ENST00000566082 Q8N814 137 aa7.45□□□□□ -1.22
USB1-212ENST00000566082 SPART-AS1P0CW21 52 aa7.45□□□□□ -1.22
USB1-212ENST00000566082 A8MTW9 85 aa7.44□□□□□ -1.22
USB1-212ENST00000566082 NDUFC2O95298 119 aa7.44□□□□□ -1.22
USB1-212ENST00000566082 CD164L2Q6UWJ8 174 aa7.44□□□□□ -1.22
USB1-212ENST00000566082 Q8IZM0 81 aa7.44□□□□□ -1.22
USB1-212ENST00000566082 PDE6GP18545 87 aa7.43□□□□□ -1.22
USB1-212ENST00000566082 F8WEM9 126 aa7.43□□□□□ -1.22
USB1-212ENST00000566082 KRTAP10-9P60411 292 aa7.43□□□□□ -1.22
USB1-212ENST00000566082 IGHV3OR16-9A0A0B4J2B5 98 aa7.42□□□□□ -1.22
USB1-212ENST00000566082 FHL2Q14192 279 aa7.42□□□□□ -1.22
USB1-212ENST00000566082 DEFB121Q5J5C9 76 aa7.42□□□□□ -1.22
USB1-212ENST00000566082 UNQ6190/PRO20217Q6UXQ8 127 aa7.42□□□□□ -1.22
USB1-212ENST00000566082 LINC01006Q8NI28 216 aa7.42□□□□□ -1.22
USB1-212ENST00000566082 FUSP35637 526 aaKnown RBP eCLIP7.41□□□□□ -1.22
USB1-212ENST00000566082 ASH1LQ9NR48 2969 aaKnown RBP7.41□□□□□ -1.22
USB1-212ENST00000566082 KIR2DL5BQ8NHK3 375 aa7.41□□□□□ -1.22
USB1-212ENST00000566082 IGKV2-28A0A075B6P5 120 aa7.4□□□□□ -1.22
USB1-212ENST00000566082 IGKV2D-28P01615 120 aa7.4□□□□□ -1.22
USB1-212ENST00000566082 MPLKIPQ8TAP9 179 aa7.4□□□□□ -1.22
USB1-212ENST00000566082 BRK1Q8WUW1 75 aa7.4□□□□□ -1.22
USB1-212ENST00000566082 CRYGAP11844 174 aa7.4□□□□□ -1.23
USB1-212ENST00000566082 BPY2O14599 106 aa7.39□□□□□ -1.23
USB1-212ENST00000566082 CYSRT1A8MQ03 144 aa7.39□□□□□ -1.23
USB1-212ENST00000566082 CSMD2Q7Z408 3487 aa7.39□□□□□ -1.23
USB1-212ENST00000566082 ETDCA0A1B0GVM5 59 aa7.39□□□□□ -1.23
USB1-212ENST00000566082 C3orf84H3BNL1 204 aa7.39□□□□□ -1.23
USB1-212ENST00000566082 C9orf66Q5T8R8 295 aa7.39□□□□□ -1.23
USB1-212ENST00000566082 H3BQ85 93 aa7.38□□□□□ -1.23
USB1-212ENST00000566082 UBE2BP63146 152 aa7.38□□□□□ -1.23
USB1-212ENST00000566082 ZNF843Q8N446 348 aa7.37□□□□□ -1.23
USB1-212ENST00000566082 BSNQ9UPA5 3926 aa7.37□□□□□ -1.23
USB1-212ENST00000566082 C6orf223Q8N319 242 aa7.37□□□□□ -1.23
USB1-212ENST00000566082 PKIGQ9Y2B9 76 aa7.37□□□□□ -1.23
USB1-212ENST00000566082 LYRM9A8MSI8 78 aa7.37□□□□□ -1.23
USB1-212ENST00000566082 COX17Q14061 63 aa7.36□□□□□ -1.23
USB1-212ENST00000566082 TRBV10-3A0A0K0K1G6 114 aa7.36□□□□□ -1.23
USB1-212ENST00000566082 TRAV7A0A075B6U4 112 aa7.35□□□□□ -1.23
USB1-212ENST00000566082 Q8N3U1 123 aa7.35□□□□□ -1.23
USB1-212ENST00000566082 CSMD1Q96PZ7 3565 aa7.35□□□□□ -1.23
USB1-212ENST00000566082 A0A0U1RQV1 116 aa7.35□□□□□ -1.23
USB1-212ENST00000566082 IGLV1-51P01701 117 aa7.35□□□□□ -1.23
USB1-212ENST00000566082 F8P00451 2351 aa7.35□□□□□ -1.23
USB1-212ENST00000566082 ZNF73O43830 326 aaPredicted RBP7.35□□□□□ -1.23
USB1-212ENST00000566082 C9orf129Q5T035 196 aaKnown RBP7.33□□□□□ -1.24
USB1-212ENST00000566082 Q6ZVQ6 151 aa7.33□□□□□ -1.24
USB1-212ENST00000566082 RMI2Q96E14 147 aa7.33□□□□□ -1.24
USB1-212ENST00000566082 LINC00575Q6W349 94 aa7.33□□□□□ -1.24
USB1-212ENST00000566082 FAM104AQ969W3 186 aa7.32□□□□□ -1.24
USB1-212ENST00000566082 PSCAO43653 123 aa7.32□□□□□ -1.24
USB1-212ENST00000566082 LINC01547P58512 204 aaPredicted RBP7.32□□□□□ -1.24
USB1-212ENST00000566082 A0A1B0GUV1 79 aa7.32□□□□□ -1.24
USB1-212ENST00000566082 NDUFC2-KCTD14E9PQ53 114 aa7.31□□□□□ -1.24
USB1-212ENST00000566082 C4orf26Q17RF5 130 aa7.31□□□□□ -1.24
USB1-212ENST00000566082 LINC01561Q8N1V8 128 aa7.31□□□□□ -1.24
USB1-212ENST00000566082 CHD6Q8TD26 2715 aa7.31□□□□□ -1.24
USB1-212ENST00000566082 MIFP14174 115 aa7.31□□□□□ -1.24
USB1-212ENST00000566082 CELA1Q9UNI1 258 aa7.3□□□□□ -1.24
USB1-212ENST00000566082 LELP1Q5T871 98 aa7.3□□□□□ -1.24
USB1-212ENST00000566082 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms