RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 DNAH6Q9C0G6 4158 aa8.53□□□□□ -1.04
SF3B3-206ENST00000565990 A0A0J9YXV3 536 aa8.52□□□□□ -1.05
SF3B3-206ENST00000565990 GAGE12HA6NDE8 117 aa8.52□□□□□ -1.05
SF3B3-206ENST00000565990 APOMO95445 188 aa8.52□□□□□ -1.05
SF3B3-206ENST00000565990 IGHV3-33P01772 117 aa8.52□□□□□ -1.05
SF3B3-206ENST00000565990 IGHV3-30-3P0DP02 117 aa8.52□□□□□ -1.05
SF3B3-206ENST00000565990 FOXI1Q12951 378 aa8.52□□□□□ -1.05
SF3B3-206ENST00000565990 C21orf62-AS1Q17RA5 79 aa8.52□□□□□ -1.05
SF3B3-206ENST00000565990 ETDBQ3ZM63 59 aa8.52□□□□□ -1.05
SF3B3-206ENST00000565990 TEN1Q86WV5 123 aa8.52□□□□□ -1.05
SF3B3-206ENST00000565990 KRTAP1-5Q9BYS1 174 aa8.52□□□□□ -1.05
SF3B3-206ENST00000565990 ERG28Q9UKR5 140 aa8.52□□□□□ -1.05
SF3B3-206ENST00000565990 LOC107984156A0A0G2JMH3 177 aa8.51□□□□□ -1.05
SF3B3-206ENST00000565990 TRBV30A0A0K0K1B3 111 aa8.51□□□□□ -1.05
SF3B3-206ENST00000565990 IBA57-AS1B1ANH7 110 aa8.51□□□□□ -1.05
SF3B3-206ENST00000565990 TMEM262E9PQX1 116 aa8.51□□□□□ -1.05
SF3B3-206ENST00000565990 ARL17AQ8IVW1 177 aa8.51□□□□□ -1.05
SF3B3-206ENST00000565990 Q8N3U1 123 aa8.51□□□□□ -1.05
SF3B3-206ENST00000565990 A4D1N5 150 aa8.5□□□□□ -1.05
SF3B3-206ENST00000565990 PSMB2P49721 201 aa8.5□□□□□ -1.05
SF3B3-206ENST00000565990 GAGE6Q13070 117 aa8.5□□□□□ -1.05
SF3B3-206ENST00000565990 TTC32Q5I0X7 151 aa8.5□□□□□ -1.05
SF3B3-206ENST00000565990 FAM104AQ969W3 186 aa8.5□□□□□ -1.05
SF3B3-206ENST00000565990 HERVK_113P63121 156 aa8.49□□□□□ -1.05
SF3B3-206ENST00000565990 MIAQ16674 131 aa8.49□□□□□ -1.05
SF3B3-206ENST00000565990 DNAH2Q9P225 4427 aa8.48□□□□□ -1.05
SF3B3-206ENST00000565990 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.48□□□□□ -1.05
SF3B3-206ENST00000565990 IGKV2-29A2NJV5 120 aaPredicted RBP8.48□□□□□ -1.05
SF3B3-206ENST00000565990 M0R2N4 97 aa8.48□□□□□ -1.05
SF3B3-206ENST00000565990 UBE2L6O14933 153 aa8.48□□□□□ -1.05
SF3B3-206ENST00000565990 NDUFA1O15239 70 aa8.48□□□□□ -1.05
SF3B3-206ENST00000565990 TCL1BO95988 128 aa8.48□□□□□ -1.05
SF3B3-206ENST00000565990 ATXN8Q156A1 80 aa8.48□□□□□ -1.05
SF3B3-206ENST00000565990 MUSTN1Q8IVN3 82 aa8.48□□□□□ -1.05
SF3B3-206ENST00000565990 LITAFQ99732 161 aa8.48□□□□□ -1.05
SF3B3-206ENST00000565990 GEMIN7Q9H840 131 aaKnown RBP8.48□□□□□ -1.05
SF3B3-206ENST00000565990 PRR34Q9NV39 138 aa8.48□□□□□ -1.05
SF3B3-206ENST00000565990 NDUFA12Q9UI09 145 aa8.48□□□□□ -1.05
SF3B3-206ENST00000565990 IGLV4-60A0A075B6I1 120 aa8.47□□□□□ -1.05
SF3B3-206ENST00000565990 COX6CP09669 75 aa8.47□□□□□ -1.05
SF3B3-206ENST00000565990 SCGB1C2P0DMR2 95 aa8.47□□□□□ -1.05
SF3B3-206ENST00000565990 SMCPP49901 116 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-206ENST00000565990 CIRBPQ14011 172 aaKnown RBP8.47□□□□□ -1.05
SF3B3-206ENST00000565990 ENHOQ6UWT2 76 aa8.47□□□□□ -1.05
SF3B3-206ENST00000565990 OPRPNQ99935 248 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-206ENST00000565990 CDC42SE2Q9NRR3 84 aa8.47□□□□□ -1.05
SF3B3-206ENST00000565990 KLK12Q9UKR0 248 aa8.47□□□□□ -1.05
SF3B3-206ENST00000565990 IGLV5-39A0A0G2JS06 123 aa8.46□□□□□ -1.06
SF3B3-206ENST00000565990 DGAT2L7PQ6IED9 249 aa8.46□□□□□ -1.06
SF3B3-206ENST00000565990 MTURNQ8N3F0 131 aa8.46□□□□□ -1.06
SF3B3-206ENST00000565990 TRAV8-3A0A0A6YYJ7 113 aa8.45□□□□□ -1.06
SF3B3-206ENST00000565990 ANGP03950 147 aaKnown RBP8.45□□□□□ -1.06
SF3B3-206ENST00000565990 HERV-K104P63124 156 aa8.45□□□□□ -1.06
SF3B3-206ENST00000565990 C1orf134Q5TEV5 83 aa8.45□□□□□ -1.06
SF3B3-206ENST00000565990 LINC00269Q8N2A0 174 aa8.45□□□□□ -1.06
SF3B3-206ENST00000565990 H3BT86 120 aa8.44□□□□□ -1.06
SF3B3-206ENST00000565990 SLC25A20O43772 301 aa8.44□□□□□ -1.06
SF3B3-206ENST00000565990 Q6ZRN7 208 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-206ENST00000565990 Q6ZUT4 128 aa8.44□□□□□ -1.06
SF3B3-206ENST00000565990 C6orf223Q8N319 242 aa8.44□□□□□ -1.06
SF3B3-206ENST00000565990 TMEM101Q96IK0 257 aa8.44□□□□□ -1.06
SF3B3-206ENST00000565990 DNAH17Q9UFH2 4485 aa8.44□□□□□ -1.06
SF3B3-206ENST00000565990 RPL13AP40429 203 aaKnown RBP8.43□□□□□ -1.06
SF3B3-206ENST00000565990 REG3AQ06141 175 aa8.43□□□□□ -1.06
SF3B3-206ENST00000565990 TRBV10-2A0A0K0K1G8 114 aa8.42□□□□□ -1.06
SF3B3-206ENST00000565990 RTL8CO15255 209 aa8.42□□□□□ -1.06
SF3B3-206ENST00000565990 LINC01620Q4KN68 170 aa8.42□□□□□ -1.06
SF3B3-206ENST00000565990 DNAH10Q8IVF4 4471 aa8.42□□□□□ -1.06
SF3B3-206ENST00000565990 TRAV8-4A0A0B4J246 113 aa8.41□□□□□ -1.06
SF3B3-206ENST00000565990 KRTAP26-1Q6PEX3 210 aa8.41□□□□□ -1.06
SF3B3-206ENST00000565990 SFTA2Q6UW10 78 aa8.41□□□□□ -1.06
SF3B3-206ENST00000565990 ANKRD29Q8N6D5 301 aa8.41□□□□□ -1.06
SF3B3-206ENST00000565990 UBE2WQ96B02 151 aa8.41□□□□□ -1.06
SF3B3-206ENST00000565990 A0A1B0GV72 72 aa8.4□□□□□ -1.06
SF3B3-206ENST00000565990 EIF4EBP3O60516 100 aaPredicted RBP8.4□□□□□ -1.06
SF3B3-206ENST00000565990 Q1RN00 199 aa8.4□□□□□ -1.06
SF3B3-206ENST00000565990 FRAS1Q86XX4 4008 aa8.39□□□□□ -1.07
SF3B3-206ENST00000565990 IGHV3-64A0A075B6Q5 118 aa8.39□□□□□ -1.07
SF3B3-206ENST00000565990 LINC00959A0A1B0GUT2 108 aa8.39□□□□□ -1.07
SF3B3-206ENST00000565990 C9JAW5 83 aa8.39□□□□□ -1.07
SF3B3-206ENST00000565990 SPINK8P0C7L1 97 aa8.39□□□□□ -1.07
SF3B3-206ENST00000565990 RMI2Q96E14 147 aa8.39□□□□□ -1.07
SF3B3-206ENST00000565990 CARD19Q96LW7 228 aa8.39□□□□□ -1.07
SF3B3-206ENST00000565990 CDIP1Q9H305 208 aa8.39□□□□□ -1.07
SF3B3-206ENST00000565990 CDKN2A-AS1Q9UH64 79 aa8.39□□□□□ -1.07
SF3B3-206ENST00000565990 CRPP02741 224 aa8.38□□□□□ -1.07
SF3B3-206ENST00000565990 PRSS2P07478 247 aa8.38□□□□□ -1.07
SF3B3-206ENST00000565990 LINC00242Q5T6M2 205 aa8.38□□□□□ -1.07
SF3B3-206ENST00000565990 LINC00336Q6ZUF6 198 aa8.38□□□□□ -1.07
SF3B3-206ENST00000565990 Q9HAA7 133 aa8.38□□□□□ -1.07
SF3B3-206ENST00000565990 LST1O00453 97 aa8.37□□□□□ -1.07
SF3B3-206ENST00000565990 TRIAP1O43715 76 aa8.37□□□□□ -1.07
SF3B3-206ENST00000565990 FAM240AA0A1B0GVK7 77 aa8.36□□□□□ -1.07
SF3B3-206ENST00000565990 SMIM1B2RUZ4 78 aa8.36□□□□□ -1.07
SF3B3-206ENST00000565990 SS18Q15532 418 aa8.36□□□□□ -1.07
SF3B3-206ENST00000565990 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
SF3B3-206ENST00000565990 CLPSL2Q6UWE3 100 aa8.36□□□□□ -1.07
SF3B3-206ENST00000565990 C1orf43Q9BWL3 253 aa8.36□□□□□ -1.07
SF3B3-206ENST00000565990 IGKV2D-24A0A075B6R9 120 aa8.35□□□□□ -1.07
SF3B3-206ENST00000565990 LRCOL1A6NCL2 159 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms