RNA–Protein interactions for RNA: ENST00000565684.5

KIFC3-223, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-223	ENST00000565684		Q8IZM0	81 aa		13.86	□□□□□ -0.19
KIFC3-223	ENST00000565684	PACRG	Q96M98	296 aa	Predicted RBP	13.86	□□□□□ -0.19
KIFC3-223	ENST00000565684	TOMM7	Q9P0U1	55 aa		13.86	□□□□□ -0.19
KIFC3-223	ENST00000565684	SCGB3A1	Q96QR1	104 aa		13.85	□□□□□ -0.19
KIFC3-223	ENST00000565684	PRSS2	P07478	247 aa		13.84	□□□□□ -0.19
KIFC3-223	ENST00000565684	SEC11A	P67812	179 aa		13.84	□□□□□ -0.19
KIFC3-223	ENST00000565684	RHEB	Q15382	184 aa		13.84	□□□□□ -0.19
KIFC3-223	ENST00000565684	MRPL18	Q9H0U6	180 aa	Known RBP	13.84	□□□□□ -0.19
KIFC3-223	ENST00000565684	COX19	Q49B96	90 aa		13.83	□□□□□ -0.2
KIFC3-223	ENST00000565684	GEMIN7	Q9H840	131 aa	Known RBP	13.82	□□□□□ -0.2
KIFC3-223	ENST00000565684	RPS10P5	Q9NQ39	176 aa		13.82	□□□□□ -0.2
KIFC3-223	ENST00000565684		M0QXV9	152 aa		13.81	□□□□□ -0.2
KIFC3-223	ENST00000565684	CKS1B	P61024	79 aa		13.81	□□□□□ -0.2
KIFC3-223	ENST00000565684	C6orf226	Q5I0X4	101 aa		13.81	□□□□□ -0.2
KIFC3-223	ENST00000565684	SMIM1	B2RUZ4	78 aa		13.8	□□□□□ -0.2
KIFC3-223	ENST00000565684	IGLV7-43	P04211	117 aa		13.8	□□□□□ -0.2
KIFC3-223	ENST00000565684	FABP9	Q0Z7S8	132 aa		13.8	□□□□□ -0.2
KIFC3-223	ENST00000565684	LRP2	P98164	4655 aa		13.8	□□□□□ -0.2
KIFC3-223	ENST00000565684	IGLV5-45	A0A087WSX0	123 aa		13.79	□□□□□ -0.2
KIFC3-223	ENST00000565684	TINCR	A0A1B0GVN0	87 aa		13.78	□□□□□ -0.2
KIFC3-223	ENST00000565684	LINC01549	A6NIU2	74 aa		13.78	□□□□□ -0.2
KIFC3-223	ENST00000565684	LINC00469	Q8N7U9	141 aa		13.78	□□□□□ -0.2
KIFC3-223	ENST00000565684		F8VRH5	84 aa		13.77	□□□□□ -0.21
KIFC3-223	ENST00000565684	FA2H	Q7L5A8	372 aa		13.77	□□□□□ -0.21
KIFC3-223	ENST00000565684	CST9L	Q9H4G1	147 aa		13.77	□□□□□ -0.21
KIFC3-223	ENST00000565684	URB1-AS1	Q96HZ7	61 aa		13.76	□□□□□ -0.21
KIFC3-223	ENST00000565684		A0A096LNJ9	63 aa		13.75	□□□□□ -0.21
KIFC3-223	ENST00000565684	SMCO4	Q9NRQ5	59 aa		13.75	□□□□□ -0.21
KIFC3-223	ENST00000565684	PDZD11	Q5EBL8	140 aa		13.74	□□□□□ -0.21
KIFC3-223	ENST00000565684	XAGE1A	Q9HD64	81 aa		13.74	□□□□□ -0.21
KIFC3-223	ENST00000565684	CXCL5	P42830	114 aa		13.73	□□□□□ -0.21
KIFC3-223	ENST00000565684	UBE2B	P63146	152 aa		13.73	□□□□□ -0.21
KIFC3-223	ENST00000565684	PMVK	Q15126	192 aa		13.73	□□□□□ -0.21
KIFC3-223	ENST00000565684		H0Y9J4	135 aa		13.72	□□□□□ -0.21
KIFC3-223	ENST00000565684	C18orf32	Q8TCD1	76 aa		13.72	□□□□□ -0.21
KIFC3-223	ENST00000565684	COX7B2	Q8TF08	81 aa		13.72	□□□□□ -0.21
KIFC3-223	ENST00000565684	DIRC1	Q969H9	104 aa		13.72	□□□□□ -0.21
KIFC3-223	ENST00000565684	SPINK8	P0C7L1	97 aa		13.71	□□□□□ -0.21
KIFC3-223	ENST00000565684	TRAPPC1	Q9Y5R8	145 aa		13.7	□□□□□ -0.22
KIFC3-223	ENST00000565684	APOC3	P02656	99 aa		13.69	□□□□□ -0.22
KIFC3-223	ENST00000565684	C22orf24	Q9Y442	160 aa		13.69	□□□□□ -0.22
KIFC3-223	ENST00000565684	KRTAP1-4	P0C5Y4	121 aa		13.66	□□□□□ -0.22
KIFC3-223	ENST00000565684	LINC00614	P0C842	121 aa		13.66	□□□□□ -0.22
KIFC3-223	ENST00000565684	IGLC3	P0DOY3	106 aa		13.66	□□□□□ -0.22
KIFC3-223	ENST00000565684	PRR26	Q8N8Z3	221 aa		13.66	□□□□□ -0.22
KIFC3-223	ENST00000565684	PMCHL1	Q16048	86 aa		13.65	□□□□□ -0.22
KIFC3-223	ENST00000565684	SNAPIN	O95295	136 aa		13.64	□□□□□ -0.23
KIFC3-223	ENST00000565684	HBD	P02042	147 aa		13.64	□□□□□ -0.23
KIFC3-223	ENST00000565684	SVBP	Q8N300	66 aa		13.64	□□□□□ -0.23
KIFC3-223	ENST00000565684	YPEL4	Q96NS1	127 aa		13.64	□□□□□ -0.23
KIFC3-223	ENST00000565684	TP73-AS1	Q9UF72	201 aa		13.63	□□□□□ -0.23
KIFC3-223	ENST00000565684	IGLV5-39	A0A0G2JS06	123 aa		13.62	□□□□□ -0.23
KIFC3-223	ENST00000565684	ZNF22	P17026	224 aa	Predicted RBP	13.62	□□□□□ -0.23
KIFC3-223	ENST00000565684	MRPL55	Q7Z7F7	128 aa	Known RBP	13.62	□□□□□ -0.23
KIFC3-223	ENST00000565684	RNF213	Q63HN8	5207 aa		13.61	□□□□□ -0.23
KIFC3-223	ENST00000565684		H3BRM9	83 aa		13.61	□□□□□ -0.23
KIFC3-223	ENST00000565684	NDUFA6	P56556	154 aa		13.61	□□□□□ -0.23
KIFC3-223	ENST00000565684	LBH	Q53QV2	105 aa	Predicted RBP	13.61	□□□□□ -0.23
KIFC3-223	ENST00000565684	RAB5B	P61020	215 aa		13.6	□□□□□ -0.23
KIFC3-223	ENST00000565684	NDUFA5	Q16718	116 aa		13.6	□□□□□ -0.23
KIFC3-223	ENST00000565684	NUPR1	O60356	82 aa		13.59	□□□□□ -0.23
KIFC3-223	ENST00000565684	ZNF861P	O60384	105 aa		13.58	□□□□□ -0.24
KIFC3-223	ENST00000565684	LINC00167	Q96N53	147 aa		13.57	□□□□□ -0.24
KIFC3-223	ENST00000565684	LPA	P08519	4548 aa		13.56	□□□□□ -0.24
KIFC3-223	ENST00000565684	IGLV1-50	A0A075B6I6	118 aa		13.56	□□□□□ -0.24
KIFC3-223	ENST00000565684	IGLV5-37	A0A075B6J1	123 aa		13.56	□□□□□ -0.24
KIFC3-223	ENST00000565684	C11orf86	A6NJI1	115 aa		13.56	□□□□□ -0.24
KIFC3-223	ENST00000565684	ATP5L	O75964	103 aa		13.56	□□□□□ -0.24
KIFC3-223	ENST00000565684	RPL37AP8	A6NKH3	93 aa		13.54	□□□□□ -0.24
KIFC3-223	ENST00000565684	BAGE3	Q86Y29	109 aa		13.54	□□□□□ -0.24
KIFC3-223	ENST00000565684	GAGE10	A6NGK3	116 aa		13.52	□□□□□ -0.25
KIFC3-223	ENST00000565684	BCE1	O60756	84 aa		13.52	□□□□□ -0.25
KIFC3-223	ENST00000565684	PFN2	P35080	140 aa		13.52	□□□□□ -0.25
KIFC3-223	ENST00000565684	SCO1	O75880	301 aa		13.5	□□□□□ -0.25
KIFC3-223	ENST00000565684	TMEM170B	Q5T4T1	132 aa		13.5	□□□□□ -0.25
KIFC3-223	ENST00000565684	ERG28	Q9UKR5	140 aa		13.5	□□□□□ -0.25
KIFC3-223	ENST00000565684	CBLN2	Q8IUK8	224 aa		13.49	□□□□□ -0.25
KIFC3-223	ENST00000565684	CHCHD1	Q96BP2	118 aa	Known RBP	13.49	□□□□□ -0.25
KIFC3-223	ENST00000565684	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.49	□□□□□ -0.25
KIFC3-223	ENST00000565684	NKAPP1	Q8N9T2	125 aa		13.48	□□□□□ -0.25
KIFC3-223	ENST00000565684	ZNF625	Q96I27	306 aa	Predicted RBP	13.48	□□□□□ -0.25
KIFC3-223	ENST00000565684	SND1-IT1	Q9HBX3	110 aa		13.48	□□□□□ -0.25
KIFC3-223	ENST00000565684	RPL28	P46779	137 aa	Known RBP	13.47	□□□□□ -0.25
KIFC3-223	ENST00000565684	KRTAP13-1	Q8IUC0	172 aa		13.47	□□□□□ -0.25
KIFC3-223	ENST00000565684	VPREB1	P12018	145 aa		13.46	□□□□□ -0.25
KIFC3-223	ENST00000565684	RPL13A	P40429	203 aa	Known RBP	13.46	□□□□□ -0.25
KIFC3-223	ENST00000565684	COX17	Q14061	63 aa		13.46	□□□□□ -0.25
KIFC3-223	ENST00000565684		Q8NDZ9	215 aa		13.46	□□□□□ -0.25
KIFC3-223	ENST00000565684	TRAV12-1	A0A0B4J245	112 aa		13.45	□□□□□ -0.26
KIFC3-223	ENST00000565684	IFI27L1	Q96BM0	104 aa		13.45	□□□□□ -0.26
KIFC3-223	ENST00000565684	IGKV2-28	A0A075B6P5	120 aa		13.43	□□□□□ -0.26
KIFC3-223	ENST00000565684	TMEM223	A0PJW6	202 aa		13.43	□□□□□ -0.26
KIFC3-223	ENST00000565684	IGKV2D-28	P01615	120 aa		13.43	□□□□□ -0.26
KIFC3-223	ENST00000565684		A0A087X002	238 aa		13.42	□□□□□ -0.26
KIFC3-223	ENST00000565684	SFTA2	Q6UW10	78 aa		13.42	□□□□□ -0.26
KIFC3-223	ENST00000565684	FAM19A2	Q8N3H0	131 aa		13.41	□□□□□ -0.26
KIFC3-223	ENST00000565684	LINC00310	P59036	64 aa		13.39	□□□□□ -0.27
KIFC3-223	ENST00000565684	HSBP1	O75506	76 aa		13.38	□□□□□ -0.27
KIFC3-223	ENST00000565684	TRGC2	P03986	189 aa		13.38	□□□□□ -0.27
KIFC3-223	ENST00000565684	UBE2A	P49459	152 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms