RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 B9D2Q9BPU9 175 aa6.6□□□□□ -1.35
CNEP1R1-206ENST00000565556 GAGE12JA6NER3 117 aa6.59□□□□□ -1.35
CNEP1R1-206ENST00000565556 GAGE4Q13068 117 aa6.59□□□□□ -1.35
CNEP1R1-206ENST00000565556 PRO0255Q9UI72 69 aa6.59□□□□□ -1.35
CNEP1R1-206ENST00000565556 A0A0J9YWU9 116 aa6.59□□□□□ -1.36
CNEP1R1-206ENST00000565556 HERVK_113P63121 156 aa6.59□□□□□ -1.36
CNEP1R1-206ENST00000565556 DGAT2L7PQ6IED9 249 aa6.59□□□□□ -1.36
CNEP1R1-206ENST00000565556 DAZ4Q86SG3 579 aaKnown RBP6.59□□□□□ -1.36
CNEP1R1-206ENST00000565556 DAZ3Q9NR90 486 aaKnown RBP6.59□□□□□ -1.36
CNEP1R1-206ENST00000565556 CDKN2A-AS1Q9UH64 79 aa6.59□□□□□ -1.36
CNEP1R1-206ENST00000565556 SS18L2Q9UHA2 77 aa6.59□□□□□ -1.36
CNEP1R1-206ENST00000565556 IGLV5-39A0A0G2JS06 123 aa6.58□□□□□ -1.36
CNEP1R1-206ENST00000565556 B5MCH6 92 aa6.58□□□□□ -1.36
CNEP1R1-206ENST00000565556 ACYP1P07311 99 aa6.58□□□□□ -1.36
CNEP1R1-206ENST00000565556 LINC00308Q8TCZ7 52 aa6.58□□□□□ -1.36
CNEP1R1-206ENST00000565556 TMEM101Q96IK0 257 aa6.58□□□□□ -1.36
CNEP1R1-206ENST00000565556 TRBV7-7A0A0K0K1E9 115 aa6.57□□□□□ -1.36
CNEP1R1-206ENST00000565556 COX7A2LO14548 114 aa6.57□□□□□ -1.36
CNEP1R1-206ENST00000565556 PAX4O43316 350 aa6.57□□□□□ -1.36
CNEP1R1-206ENST00000565556 C11orf45Q8TAV5 145 aa6.57□□□□□ -1.36
CNEP1R1-206ENST00000565556 Q9UF83 564 aa6.57□□□□□ -1.36
CNEP1R1-206ENST00000565556 IGHV3-38A0A0C4DH36 116 aa6.56□□□□□ -1.36
CNEP1R1-206ENST00000565556 F5H768 121 aa6.56□□□□□ -1.36
CNEP1R1-206ENST00000565556 FAM19A3Q7Z5A8 133 aa6.56□□□□□ -1.36
CNEP1R1-206ENST00000565556 DAND5Q8N907 189 aa6.56□□□□□ -1.36
CNEP1R1-206ENST00000565556 PPDPFQ9H3Y8 114 aa6.56□□□□□ -1.36
CNEP1R1-206ENST00000565556 Q9H8V8 135 aa6.56□□□□□ -1.36
CNEP1R1-206ENST00000565556 CCDC179H3BU77 68 aa6.56□□□□□ -1.36
CNEP1R1-206ENST00000565556 GYPEP15421 78 aa6.56□□□□□ -1.36
CNEP1R1-206ENST00000565556 LOC100131303A0A0U1RQF7 123 aa6.55□□□□□ -1.36
CNEP1R1-206ENST00000565556 LINC00694P0DN24 101 aa6.55□□□□□ -1.36
CNEP1R1-206ENST00000565556 HTN3P15516 51 aa6.55□□□□□ -1.36
CNEP1R1-206ENST00000565556 HERV-K104P63124 156 aa6.55□□□□□ -1.36
CNEP1R1-206ENST00000565556 SMIM1B2RUZ4 78 aa6.54□□□□□ -1.36
CNEP1R1-206ENST00000565556 H3BNG1 76 aa6.54□□□□□ -1.36
CNEP1R1-206ENST00000565556 TRACP01848 142 aa6.54□□□□□ -1.36
CNEP1R1-206ENST00000565556 COX6A2Q02221 97 aa6.54□□□□□ -1.36
CNEP1R1-206ENST00000565556 LINC00242Q5T6M2 205 aa6.54□□□□□ -1.36
CNEP1R1-206ENST00000565556 IMUPQ9GZP8 106 aa6.54□□□□□ -1.36
CNEP1R1-206ENST00000565556 CSDC2Q9Y534 153 aaKnown RBP6.54□□□□□ -1.36
CNEP1R1-206ENST00000565556 NANOS2P60321 138 aaKnown RBP6.53□□□□□ -1.36
CNEP1R1-206ENST00000565556 MEIG1Q5JSS6 88 aa6.53□□□□□ -1.36
CNEP1R1-206ENST00000565556 Q6ZTC4 211 aa6.53□□□□□ -1.36
CNEP1R1-206ENST00000565556 ZNF625Q96I27 306 aaPredicted RBP6.53□□□□□ -1.36
CNEP1R1-206ENST00000565556 TENM3Q9P273 2699 aa6.52□□□□□ -1.37
CNEP1R1-206ENST00000565556 DEFB131BA0A096LNP1 70 aa6.52□□□□□ -1.37
CNEP1R1-206ENST00000565556 TRAV10A0A0B4J240 114 aa6.52□□□□□ -1.37
CNEP1R1-206ENST00000565556 SOSTDC1Q6X4U4 206 aa6.51□□□□□ -1.37
CNEP1R1-206ENST00000565556 LINC00643Q86TS7 51 aa6.51□□□□□ -1.37
CNEP1R1-206ENST00000565556 TMEM243Q9BU79 118 aa6.51□□□□□ -1.37
CNEP1R1-206ENST00000565556 TRBV6-8A0A0A6YYG3 113 aa6.5□□□□□ -1.37
CNEP1R1-206ENST00000565556 TRAV13-2A0A0B4J235 113 aa6.5□□□□□ -1.37
CNEP1R1-206ENST00000565556 TRAV13-1A0A0B4J241 112 aa6.5□□□□□ -1.37
CNEP1R1-206ENST00000565556 INAFM2P0DMQ5 153 aa6.5□□□□□ -1.37
CNEP1R1-206ENST00000565556 NTM-AS1Q6ZSK4 140 aa6.5□□□□□ -1.37
CNEP1R1-206ENST00000565556 A0A0U1RRA0 63 aa6.5□□□□□ -1.37
CNEP1R1-206ENST00000565556 A0A096LPF7 62 aa6.49□□□□□ -1.37
CNEP1R1-206ENST00000565556 FAM236AA0A1B0GUQ0 79 aa6.49□□□□□ -1.37
CNEP1R1-206ENST00000565556 FAM236BA0A1B0GV22 79 aa6.49□□□□□ -1.37
CNEP1R1-206ENST00000565556 UBE2L6O14933 153 aa6.49□□□□□ -1.37
CNEP1R1-206ENST00000565556 CRPP02741 224 aa6.49□□□□□ -1.37
CNEP1R1-206ENST00000565556 BAALC-AS2P0C853 105 aa6.49□□□□□ -1.37
CNEP1R1-206ENST00000565556 CDC42SE2Q9NRR3 84 aa6.49□□□□□ -1.37
CNEP1R1-206ENST00000565556 CHCHD5Q9BSY4 110 aa6.48□□□□□ -1.37
CNEP1R1-206ENST00000565556 TMEM126AQ9H061 195 aa6.48□□□□□ -1.37
CNEP1R1-206ENST00000565556 CXCL5P42830 114 aa6.47□□□□□ -1.37
CNEP1R1-206ENST00000565556 RPL28P46779 137 aaKnown RBP6.47□□□□□ -1.37
CNEP1R1-206ENST00000565556 SDIM1Q6ZPB5 146 aa6.47□□□□□ -1.37
CNEP1R1-206ENST00000565556 SMCR5Q8TEV8 140 aa6.47□□□□□ -1.37
CNEP1R1-206ENST00000565556 DNHD1Q96M86 4753 aa6.47□□□□□ -1.37
CNEP1R1-206ENST00000565556 LELP1Q5T871 98 aa6.46□□□□□ -1.38
CNEP1R1-206ENST00000565556 COX7B2Q8TF08 81 aa6.46□□□□□ -1.38
CNEP1R1-206ENST00000565556 FAM218AQ96MZ4 157 aa6.46□□□□□ -1.38
CNEP1R1-206ENST00000565556 MALP21145 153 aa6.45□□□□□ -1.38
CNEP1R1-206ENST00000565556 LYPD5Q6UWN5 251 aa6.45□□□□□ -1.38
CNEP1R1-206ENST00000565556 MEGF8Q7Z7M0 2845 aa6.45□□□□□ -1.38
CNEP1R1-206ENST00000565556 COL7A1Q02388 2944 aa6.45□□□□□ -1.38
CNEP1R1-206ENST00000565556 DNAL4O96015 105 aa6.45□□□□□ -1.38
CNEP1R1-206ENST00000565556 SMIM20Q8N5G0 67 aa6.45□□□□□ -1.38
CNEP1R1-206ENST00000565556 MIR7-3HGQ8N6C7 128 aa6.45□□□□□ -1.38
CNEP1R1-206ENST00000565556 SND1-IT1Q9HBX3 110 aa6.45□□□□□ -1.38
CNEP1R1-206ENST00000565556 C22orf24Q9Y442 160 aa6.45□□□□□ -1.38
CNEP1R1-206ENST00000565556 A0A1B0GUV1 79 aa6.44□□□□□ -1.38
CNEP1R1-206ENST00000565556 GAGE2AQ6NT46 116 aa6.44□□□□□ -1.38
CNEP1R1-206ENST00000565556 H0YGX0 51 aa6.43□□□□□ -1.38
CNEP1R1-206ENST00000565556 UQCRQO14949 82 aa6.43□□□□□ -1.38
CNEP1R1-206ENST00000565556 C5orf38Q86SI9 138 aa6.43□□□□□ -1.38
CNEP1R1-206ENST00000565556 C3orf22Q8N5N4 141 aa6.43□□□□□ -1.38
CNEP1R1-206ENST00000565556 LINC00337Q8N6G1 96 aa6.43□□□□□ -1.38
CNEP1R1-206ENST00000565556 HUWE1Q7Z6Z7 4374 aaKnown RBP6.43□□□□□ -1.38
CNEP1R1-206ENST00000565556 LINC00158P58513 81 aa6.42□□□□□ -1.38
CNEP1R1-206ENST00000565556 C9orf153Q5TBE3 101 aa6.42□□□□□ -1.38
CNEP1R1-206ENST00000565556 IGKV2-28A0A075B6P5 120 aa6.42□□□□□ -1.38
CNEP1R1-206ENST00000565556 NUPR2A6NF83 97 aa6.42□□□□□ -1.38
CNEP1R1-206ENST00000565556 IBA57-AS1B1ANH7 110 aa6.42□□□□□ -1.38
CNEP1R1-206ENST00000565556 IGKV2D-28P01615 120 aa6.42□□□□□ -1.38
CNEP1R1-206ENST00000565556 ESRGQ1W209 222 aa6.42□□□□□ -1.38
CNEP1R1-206ENST00000565556 SMIM11BQ8TCY0 68 aa6.42□□□□□ -1.38
CNEP1R1-206ENST00000565556 Q9HAA7 133 aa6.42□□□□□ -1.38
CNEP1R1-206ENST00000565556 TOMM7Q9P0U1 55 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms