RNA–Protein interactions for RNA: ENST00000565154.5

PKM-215, Transcript of pyruvate kinase M1/2, human

APPRIS ALT1 TSL 2 BASIC

Gene PKM, Length 2,004 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-215	ENST00000565154	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.86	□□□□□ -0.19
PKM-215	ENST00000565154	FOXI1	Q12951	378 aa		13.86	□□□□□ -0.19
PKM-215	ENST00000565154	C6orf226	Q5I0X4	101 aa		13.86	□□□□□ -0.19
PKM-215	ENST00000565154	SOSTDC1	Q6X4U4	206 aa		13.86	□□□□□ -0.19
PKM-215	ENST00000565154	WFDC10B	Q8IUB3	73 aa		13.86	□□□□□ -0.19
PKM-215	ENST00000565154	IBA57-AS1	B1ANH7	110 aa		13.85	□□□□□ -0.19
PKM-215	ENST00000565154		H3BMG7	143 aa		13.84	□□□□□ -0.19
PKM-215	ENST00000565154	TRAV10	A0A0B4J240	114 aa		13.83	□□□□□ -0.2
PKM-215	ENST00000565154		Q1RN00	199 aa		13.83	□□□□□ -0.2
PKM-215	ENST00000565154	ESRG	Q1W209	222 aa		13.83	□□□□□ -0.2
PKM-215	ENST00000565154	ENHO	Q6UWT2	76 aa		13.83	□□□□□ -0.2
PKM-215	ENST00000565154		H7C2G1	150 aa		13.83	□□□□□ -0.2
PKM-215	ENST00000565154	MAL	P21145	153 aa		13.83	□□□□□ -0.2
PKM-215	ENST00000565154	CRP	P02741	224 aa		13.82	□□□□□ -0.2
PKM-215	ENST00000565154	MIR7-3HG	Q8N6C7	128 aa		13.81	□□□□□ -0.2
PKM-215	ENST00000565154	GAGE12H	A6NDE8	117 aa		13.81	□□□□□ -0.2
PKM-215	ENST00000565154	KIAA0087	Q14695	138 aa		13.81	□□□□□ -0.2
PKM-215	ENST00000565154	CXCL5	P42830	114 aa		13.8	□□□□□ -0.2
PKM-215	ENST00000565154	PSMB2	P49721	201 aa		13.8	□□□□□ -0.2
PKM-215	ENST00000565154	LINC00158	P58513	81 aa		13.8	□□□□□ -0.2
PKM-215	ENST00000565154	TRAV8-4	A0A0B4J246	113 aa		13.8	□□□□□ -0.2
PKM-215	ENST00000565154	TRBV20-1	A0A075B6N2	111 aa		13.79	□□□□□ -0.2
PKM-215	ENST00000565154	CKS1B	P61024	79 aa		13.79	□□□□□ -0.2
PKM-215	ENST00000565154	CFAP161	Q6P656	301 aa		13.79	□□□□□ -0.2
PKM-215	ENST00000565154	C2orf82	Q6UX34	121 aa		13.79	□□□□□ -0.2
PKM-215	ENST00000565154	SCGB1C2	P0DMR2	95 aa		13.78	□□□□□ -0.2
PKM-215	ENST00000565154	RPL13A	P40429	203 aa	Known RBP	13.78	□□□□□ -0.2
PKM-215	ENST00000565154	C15orf53	Q8NAA6	179 aa		13.78	□□□□□ -0.2
PKM-215	ENST00000565154	UBE2W	Q96B02	151 aa		13.78	□□□□□ -0.2
PKM-215	ENST00000565154	TRBV30	A0A0K0K1B3	111 aa		13.78	□□□□□ -0.2
PKM-215	ENST00000565154		F8W1H4	67 aa		13.78	□□□□□ -0.2
PKM-215	ENST00000565154	TCL1B	O95988	128 aa		13.78	□□□□□ -0.2
PKM-215	ENST00000565154	PFN2	P35080	140 aa		13.77	□□□□□ -0.21
PKM-215	ENST00000565154	TRIAP1	O43715	76 aa		13.76	□□□□□ -0.21
PKM-215	ENST00000565154	LINC01556	Q5JQF7	62 aa		13.76	□□□□□ -0.21
PKM-215	ENST00000565154	PRO0461	Q9UI25	63 aa		13.76	□□□□□ -0.21
PKM-215	ENST00000565154	KLK5	Q9Y337	293 aa	Predicted RBP	13.76	□□□□□ -0.21
PKM-215	ENST00000565154	SND1-IT1	Q9HBX3	110 aa		13.73	□□□□□ -0.21
PKM-215	ENST00000565154	CCL18	P55774	89 aa		13.73	□□□□□ -0.21
PKM-215	ENST00000565154	SPAG11B	Q08648	103 aa		13.73	□□□□□ -0.21
PKM-215	ENST00000565154	OCIAD2	Q56VL3	154 aa		13.72	□□□□□ -0.21
PKM-215	ENST00000565154	MTURN	Q8N3F0	131 aa		13.72	□□□□□ -0.21
PKM-215	ENST00000565154	COX17	Q14061	63 aa		13.71	□□□□□ -0.21
PKM-215	ENST00000565154	WFDC2	Q14508	124 aa		13.71	□□□□□ -0.22
PKM-215	ENST00000565154	COL7A1	Q02388	2944 aa		13.71	□□□□□ -0.22
PKM-215	ENST00000565154	COX6C	P09669	75 aa		13.7	□□□□□ -0.22
PKM-215	ENST00000565154	DNAH9	Q9NYC9	4486 aa		13.7	□□□□□ -0.22
PKM-215	ENST00000565154	DNAH10OS	P0CZ25	163 aa		13.69	□□□□□ -0.22
PKM-215	ENST00000565154	KRTAP26-1	Q6PEX3	210 aa		13.69	□□□□□ -0.22
PKM-215	ENST00000565154	TRAV13-2	A0A0B4J235	113 aa		13.68	□□□□□ -0.22
PKM-215	ENST00000565154	IGKV2-28	A0A075B6P5	120 aa		13.68	□□□□□ -0.22
PKM-215	ENST00000565154	IGKV2D-28	P01615	120 aa		13.68	□□□□□ -0.22
PKM-215	ENST00000565154	ATXN8	Q156A1	80 aa		13.68	□□□□□ -0.22
PKM-215	ENST00000565154	B9D2	Q9BPU9	175 aa		13.68	□□□□□ -0.22
PKM-215	ENST00000565154	C6orf223	Q8N319	242 aa		13.67	□□□□□ -0.22
PKM-215	ENST00000565154	LINC00588	Q9Y4M8	146 aa		13.66	□□□□□ -0.22
PKM-215	ENST00000565154		K7ERU9	68 aa		13.66	□□□□□ -0.22
PKM-215	ENST00000565154	LINC00337	Q8N6G1	96 aa		13.66	□□□□□ -0.22
PKM-215	ENST00000565154	SMCP	P49901	116 aa	Predicted RBP	13.65	□□□□□ -0.22
PKM-215	ENST00000565154	C1orf43	Q9BWL3	253 aa		13.65	□□□□□ -0.22
PKM-215	ENST00000565154	C9orf116	Q5BN46	136 aa	Predicted RBP	13.64	□□□□□ -0.23
PKM-215	ENST00000565154	C10orf25	Q5T742	122 aa		13.64	□□□□□ -0.23
PKM-215	ENST00000565154	UNQ6190/PRO20217	Q6UXQ8	127 aa		13.64	□□□□□ -0.23
PKM-215	ENST00000565154	LINC00526	Q96FQ7	95 aa		13.64	□□□□□ -0.23
PKM-215	ENST00000565154	ETDB	Q3ZM63	59 aa		13.63	□□□□□ -0.23
PKM-215	ENST00000565154	NTN5	Q8WTR8	489 aa	Predicted RBP	13.63	□□□□□ -0.23
PKM-215	ENST00000565154	MUC7	Q8TAX7	377 aa		13.63	□□□□□ -0.23
PKM-215	ENST00000565154	STAB2	Q8WWQ8	2551 aa		13.61	□□□□□ -0.23
PKM-215	ENST00000565154	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.61	□□□□□ -0.23
PKM-215	ENST00000565154	LINC01620	Q4KN68	170 aa		13.61	□□□□□ -0.23
PKM-215	ENST00000565154	CLEC2B	Q92478	149 aa		13.61	□□□□□ -0.23
PKM-215	ENST00000565154		C9JAW5	83 aa		13.6	□□□□□ -0.23
PKM-215	ENST00000565154	LST1	O00453	97 aa		13.6	□□□□□ -0.23
PKM-215	ENST00000565154	IGKV2D-24	A0A075B6R9	120 aa		13.59	□□□□□ -0.23
PKM-215	ENST00000565154	C15orf56	Q8N910	161 aa		13.59	□□□□□ -0.23
PKM-215	ENST00000565154	SLC25A20	O43772	301 aa		13.59	□□□□□ -0.23
PKM-215	ENST00000565154	UPK3B	Q9BT76	320 aa		13.59	□□□□□ -0.23
PKM-215	ENST00000565154	ZNF561-AS1	K7EIQ3	104 aa		13.58	□□□□□ -0.24
PKM-215	ENST00000565154	NDUFC2	O95298	119 aa		13.58	□□□□□ -0.24
PKM-215	ENST00000565154	RPL28	P46779	137 aa	Known RBP	13.58	□□□□□ -0.24
PKM-215	ENST00000565154		M0QXV9	152 aa		13.57	□□□□□ -0.24
PKM-215	ENST00000565154	HIGD2B	Q4VC39	106 aa		13.57	□□□□□ -0.24
PKM-215	ENST00000565154	C6orf48	Q9UBA6	75 aa		13.57	□□□□□ -0.24
PKM-215	ENST00000565154		Q9HAA7	133 aa		13.56	□□□□□ -0.24
PKM-215	ENST00000565154	CAMK2N2	Q96S95	79 aa		13.55	□□□□□ -0.24
PKM-215	ENST00000565154	TRBV10-2	A0A0K0K1G8	114 aa		13.54	□□□□□ -0.24
PKM-215	ENST00000565154	C2orf48	Q96LS8	159 aa		13.54	□□□□□ -0.24
PKM-215	ENST00000565154	TEN1	Q86WV5	123 aa		13.54	□□□□□ -0.24
PKM-215	ENST00000565154	SMIM11B	Q8TCY0	68 aa		13.54	□□□□□ -0.24
PKM-215	ENST00000565154	LINC01600	Q96MT4	127 aa		13.54	□□□□□ -0.24
PKM-215	ENST00000565154	DNAH1	Q9P2D7	4330 aa		13.53	□□□□□ -0.24
PKM-215	ENST00000565154	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.53	□□□□□ -0.24
PKM-215	ENST00000565154	RNF151	Q2KHN1	245 aa		13.52	□□□□□ -0.24
PKM-215	ENST00000565154	ANKRD29	Q8N6D5	301 aa		13.52	□□□□□ -0.24
PKM-215	ENST00000565154	OR13C6P	Q8NH95	151 aa		13.52	□□□□□ -0.24
PKM-215	ENST00000565154	NHLRC4	P0CG21	123 aa	Predicted RBP	13.51	□□□□□ -0.25
PKM-215	ENST00000565154		F8WDY8	70 aa		13.5	□□□□□ -0.25
PKM-215	ENST00000565154		H3BT86	120 aa		13.49	□□□□□ -0.25
PKM-215	ENST00000565154		J3QR89	54 aa		13.49	□□□□□ -0.25
PKM-215	ENST00000565154		Q6ZRU5	148 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms