RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 XCL1P47992 114 aa2.31□□□□□ -2.04
CDH1-207ENST00000564745 KLKP1Q107X0 134 aa2.31□□□□□ -2.04
CDH1-207ENST00000564745 LYPD5Q6UWN5 251 aa2.31□□□□□ -2.04
CDH1-207ENST00000564745 FP248Q71RG6 208 aaPredicted RBP2.31□□□□□ -2.04
CDH1-207ENST00000564745 RPL39LQ96EH5 51 aaKnown RBP2.31□□□□□ -2.04
CDH1-207ENST00000564745 TM2D3Q9BRN9 247 aa2.31□□□□□ -2.04
CDH1-207ENST00000564745 TTTY12Q9BZ98 90 aa2.31□□□□□ -2.04
CDH1-207ENST00000564745 C22orf24Q9Y442 160 aa2.31□□□□□ -2.04
CDH1-207ENST00000564745 SDK2Q58EX2 2172 aa2.31□□□□□ -2.04
CDH1-207ENST00000564745 PCDH15Q96QU1 1955 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 KIAA1549Q9HCM3 1950 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 MYO7BQ6PIF6 2116 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 DCHS1Q96JQ0 3298 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 USP34Q70CQ2 3546 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 IGLV3-9A0A075B6K5 115 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 TRAV7A0A075B6U4 112 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 TRAV21A0A0B4J279 112 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 A6NED7 52 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 M0R1W7 72 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 LYZL6O75951 148 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 IGHV3-53P01767 116 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 RNASE4P34096 147 aaKnown RBP2.3□□□□□ -2.04
CDH1-207ENST00000564745 CIRBPQ14011 172 aaKnown RBP2.3□□□□□ -2.04
CDH1-207ENST00000564745 KLK9Q2XQG4 91 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 FAM223AQ8IWN6 122 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 MUC7Q8TAX7 377 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 NDUFA12Q9UI09 145 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 KLK9Q9UKQ9 250 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 PHLDA3Q9Y5J5 127 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 LTBP2Q14767 1821 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 EXPH5Q8NEV8 1989 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 SPAG17Q6Q759 2223 aa2.3□□□□□ -2.04
CDH1-207ENST00000564745 MAP1BP46821 2468 aaKnown RBP2.3□□□□□ -2.04
CDH1-207ENST00000564745 ZFHX2Q9C0A1 2572 aaPredicted RBP2.29□□□□□ -2.04
CDH1-207ENST00000564745 GOLGA4Q13439 2230 aaKnown RBP2.29□□□□□ -2.04
CDH1-207ENST00000564745 PRRC2BQ5JSZ5 2229 aaKnown RBP2.29□□□□□ -2.04
CDH1-207ENST00000564745 TET1Q8NFU7 2136 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 EML6Q6ZMW3 1958 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 IGKV3D-7A0A0C4DH55 119 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 H0YGX0 51 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 NDUFA1O15239 70 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 CCKP06307 115 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 CTSGP08311 255 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 MGPP08493 103 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 CCL3L1P16619 93 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 S100A4P26447 101 aaKnown RBP2.29□□□□□ -2.04
CDH1-207ENST00000564745 RPL28P46779 137 aaKnown RBP2.29□□□□□ -2.04
CDH1-207ENST00000564745 RPL39P62891 51 aaKnown RBP2.29□□□□□ -2.04
CDH1-207ENST00000564745 PMAIP1Q13794 54 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 Q6ZRU5 148 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 PRR15Q8IV56 129 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 C20orf197Q8N268 126 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 LY6G5BQ8NDX9 201 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 LINC00308Q8TCZ7 52 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 BRK1Q8WUW1 75 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 RNASE6Q93091 150 aaKnown RBP2.29□□□□□ -2.04
CDH1-207ENST00000564745 LINC00846Q9NV44 126 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 C2CD3Q4AC94 2353 aa2.29□□□□□ -2.04
CDH1-207ENST00000564745 PRUNE2Q8WUY3 3088 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 RP1L1Q8IWN7 2480 aaPredicted RBP2.28□□□□□ -2.04
CDH1-207ENST00000564745 USF3Q68DE3 2245 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 A0A087WVE0 104 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 TRAV13-2A0A0B4J235 113 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 TRBV7-6A0A0J9YX20 115 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 IBA57-AS1B1ANH7 110 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 BUB1B-PAK6H3BSN5 160 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 NDUFB3O43676 98 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 APELAP0DMC3 54 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 Q8N2B8 174 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 DEFB108BQ8NET1 73 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 WFDC11Q8NEX6 87 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 B9D2Q9BPU9 175 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 KAAG1Q9UBP8 84 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 U3KQA8 63 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 PTPRBP23467 1997 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 ASPMQ8IZT6 3477 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 ITPR3Q14573 2671 aa2.28□□□□□ -2.04
CDH1-207ENST00000564745 NAV3Q8IVL0 2385 aa2.28□□□□□ -2.05
CDH1-207ENST00000564745 UNC13CQ8NB66 2214 aa2.27□□□□□ -2.05
CDH1-207ENST00000564745 IGHV3-64A0A075B6Q5 118 aa2.27□□□□□ -2.05
CDH1-207ENST00000564745 TRAV12-3A0A0B4J271 114 aa2.27□□□□□ -2.05
CDH1-207ENST00000564745 JMJD7-PLA2G4BH0Y9G9 81 aa2.27□□□□□ -2.05
CDH1-207ENST00000564745 M0QY20 66 aa2.27□□□□□ -2.05
CDH1-207ENST00000564745 ERC2-IT1O76042 136 aa2.27□□□□□ -2.05
CDH1-207ENST00000564745 PRB4P10163 310 aaPredicted RBP2.27□□□□□ -2.05
CDH1-207ENST00000564745 RNASE3P12724 160 aaKnown RBP2.27□□□□□ -2.05
CDH1-207ENST00000564745 VMO1Q7Z5L0 202 aa2.27□□□□□ -2.05
CDH1-207ENST00000564745 DEFB119Q8N690 84 aa2.27□□□□□ -2.05
CDH1-207ENST00000564745 ZFAND2AQ8N6M9 145 aa2.27□□□□□ -2.05
CDH1-207ENST00000564745 MYO9BQ13459 2157 aa2.27□□□□□ -2.05
CDH1-207ENST00000564745 CEP192Q8TEP8 1941 aa2.27□□□□□ -2.05
CDH1-207ENST00000564745 RTTNQ86VV8 2226 aa2.26□□□□□ -2.05
CDH1-207ENST00000564745 ZNF407Q9C0G0 2248 aa2.26□□□□□ -2.05
CDH1-207ENST00000564745 DNHD1Q96M86 4753 aa2.26□□□□□ -2.05
CDH1-207ENST00000564745 ABCA2Q9BZC7 2435 aa2.26□□□□□ -2.05
CDH1-207ENST00000564745 TRAV23DV6A0A075B6W5 121 aa2.26□□□□□ -2.05
CDH1-207ENST00000564745 CLPSL1A2RUU4 121 aa2.26□□□□□ -2.05
CDH1-207ENST00000564745 CCL4P13236 92 aa2.26□□□□□ -2.05
CDH1-207ENST00000564745 CCL5P13501 91 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms